Polymorphism and Forensic Application of 11 Y-SNP in Guizhou Shui Ethnic Group.
10.12116/j.issn.1004-5619.2020.06.008
- Author:
Xue LUO
1
;
Wen Fei ZHANG
1
;
Lin YANG
1
;
En Fang QIAN
1
;
Mei Qing YANG
1
;
Han ZHANG
1
;
Jing Yan JI
1
;
Jiang HUANG
1
Author Information
1. School of Forensic Medicine, Guizhou Medical University, Guiyang 550004, China.
- Publication Type:Journal Article
- Keywords:
forensic genetics;
Y chromosome;
single nucleotide polymorphism;
Shui ethnic group;
Guizhou
- MeSH:
Asian People/genetics*;
China;
Chromosomes, Human, Y/genetics*;
Ethnicity/genetics*;
Genetics, Population;
Haplotypes;
Humans;
Male;
Phylogeny;
Polymorphism, Genetic;
Polymorphism, Single Nucleotide
- From:
Journal of Forensic Medicine
2020;36(6):791-796
- CountryChina
- Language:Chinese
-
Abstract:
Objective To investigate the frequency distribution features of 11 Y-SNP of Guizhou Shui ethnic group, explore its genetic relationship with other ethnic groups and evaluate its forensic application value. Methods Multiplex amplification of the 11 Y-SNP of samples of 180 unrelated male individuals from Guizhou Shui ethnic group was performed with microsequencing technique. The frequency of haplogroup was calculated by direct counting method, and principal component analysis （PCA） of Guizhou Shui ethnic group and reference ethnic groups was performed by using Multi-variate statistical package （MVSP）. The Fst genetic distance between Guizhou Shui ethnic group and other ethnic groups was calculated with Arlequin v3.5. The phylogenetic tree was established with MEGA 4.0 software according to the Fst value. Results Six types of Y chromosome haplogroups were observed in total. Among which, the distribution frequency of O-M175 haplogroup was the highest （71.11%）, followed by C-M130 （25.00%）, and D-M174 （3.89%）. O1b-M268 （31.11%） and O2a2-IMS-JST021354 （28.33%） had a relatively high distribution frequency in O haplogroup. The paternal relationship between Guizhou Shui ethnic group and Guizhou Gelao ethnic group in the same language group was the closest. Conclusion The distribution of Y-SNP haplogroup of the Shui ethnic group in Guizhou has certain specificity, which can provide basic data for forensic biogeographic inference.
