Screening for Differentially Expressed Genes in Pancreatitis Cell Model Transfected With Ghrelin MiRNA by Gene Chip
10.3969/j.issn.1008-7125.2020.02.006
- VernacularTitle: 基因芯片筛选ghrelin miRNA转染胰腺炎细胞模型后的差异表达基因
- Author:
Xiping TANG
1
Author Information
1. Department of Endoscope, Tumor Hospital Affiliated Guangxi Medical University
- Publication Type:Journal Article
- Keywords:
Acute Pancreatitis;
Gene Chip;
Ghrelin;
MicroRNAs
- From:
Chinese Journal of Gastroenterology
2020;25(2):96-100
- CountryChina
- Language:Chinese
-
Abstract:
Background: Previous studies suggest that ghrelin plays an important role in the pathogenesis of acute pancreatitis, but the mechanism is still unclear. Aims: To screen the differentially expressed genes in pancreatitis pancreatic acinar cells transfected with ghrelin miRNA by gene chip. Methods: Pancreatitis was induced by caerulin. AR42J cells were divided into ghrelin miRNA+caerulin group and negative control+caerulin group. AR42J cells were collected to extract RNA and synthesize ds-DNA, and was then hybridized with rat whole genome microarray for scanning and analyzing. Differentially expressed genes related to inflammation and calcium pathways were screened, and expressions of Bcl-2, caspase-8, caspase-12 were verified by RT-PCR. Results: For AR42J cells after intervention with ghrelin miRNA+caerulin, 2 938 differentially expressed genes were screened, including 1 435 up-regulated genes and 1 503 down-regulated genes. There were 60 differentially expressed genes involved in CAMP/Ca2+ signaling pathway and 199 differentially expressed genes involved in inflammation pathway. RT-PCR results showed that expressions of Bcl-2, caspase-12 were down-regulated and expression of caspase-8 was up-regulated in ghrelin miRNA+caerulin group, consistent with the results of gene chip. Conclusions: Gene chip can be used to screen the genes that play a key role in the process of pancreatitis pancreatic acinar cells transfected with ghrelin miRNA, and provide a theoretical basis and reference for the study of mechanism of endogenous ghrelin on pancreatitis pancreatic acinar cells.
