Utilizing databases to study the expression of FAM83C in gastric cancer and its clinical significance
10.16571/j.cnki.1008-8199.2020.04.009
- VernacularTitle: 基于多数据库分析FAM83C在胃癌中的表达及临床意义
- Author:
Ding CAO
1
;
Dan-dan MA
2
;
Zhi-yong ZHANG
2
;
Ye YUAN
2
;
Lan-hai ZHONG
2
;
Zheng-kang XIAO
2
;
Kang SUN
2
;
Xun CAI
2
Author Information
1. School of Medicine, Wuhan University of Science and Technology, Wuhan 430070, Hubei, China
2. Department of General Surgery, General Hospital of Central Theater Command, PLA, Wuhan 430070, Hubei, China
- Publication Type:Journal Article
- Keywords:
gastric cancer;
FAM83C;
prognosis;
expression;
clinicopathologic features
- From:
Journal of Medical Postgraduates
2020;33(4):388-393
- CountryChina
- Language:Chinese
-
Abstract:
ObjectiveAs the pathogenesis of gastric cancer remains unclear, this paper aims to investigate the expression of FAM83C in gastric cancer tissues, to analyze the relationship between the expression difference and clinicopathological features and prognosis, and to further explore the mutation sites and methylation of FAM83C in gastric cancer.MethodsData mining of FAM83C was conducted by TCGA database and Oncomine database to analyze the expression of FAM83C in gastric cancer and other multiple types of cancer. The relationship between the expression of FAM83C and the clinicopathological characteristics of gastric cancer was analyzed by LinkedOmics database. The effect of FAM83C expression on the prognosis of patients with gastric cancer was analyzed by Kaplan Meier Plotter database. The mutation sites and methylation of FAM83C in gastric cancer was analyzed by cBioportal database and MethHC database. The protein network interacting with FAM83C was analyzed by String database.ResultsThere were 56 studies on FAM83C expression differences in the Oncomine database with statistical significance (P<0.05), among which 46 studies suggested that FAM83C was highly expressed in a variety of cancer tissues, and its high expression in gastric cancer was statistically significant (P=0.000733). Meanwhile, the analysis of 637 gastric cancer samples in the TCGA database showed that FAM83C was highly expressed in all kinds of gastric cancer tissues (P<0.05). The differences between FAM83C expression level and patients' age (P=0.0344) and T stage (P=0.034) were statistically significant (P<0.05). The group with high FAM83C expression had shorter survival time and worse prognosis, and the difference was statistically significant (P=0.0071). FAM83C mutations in gastric cancer include missense mutation, frame-shift mutation and splicing mutation. The methylation level of FAM83C gene promoter region in gastric cancer was significantly higher than that in normal gastric tissue (P<0.005). The proteins interacting with FAM83C include SLCO5A1, AKR7A3, MMP24, EIF6 and ARL11, etc., and may participate in the cellular function process together.ConclusionFAM83C is highly expressed in gastric cancer. In addition, its expression level has a certain correlation with the degree of malignancy and poor prognosis of gastric cancer, which is manifested in the characteristics of proto-oncogenes to a certain extent, and is expected to become a new target for clinical diagnosis and treatment of gastric cancer.
