1.Multi-omics reveals the inhibition mechanism of Bacillus velezensis DJ1 against Fusarium graminearum.
Meng SUN ; Lu ZHOU ; Yutong LIU ; Wei JIANG ; Gengxuan YAN ; Wenjing DUAN ; Ting SU ; Chunyan LIU ; Shumei ZHANG
Chinese Journal of Biotechnology 2025;41(10):3719-3733
Bacillus velezensis DJ1 exhibits broad-spectrum antagonistic activity against diverse phytopathogenic fungi, while its biocontrol mechanisms against Fusarium graminearum, the causal agent of maize stalk rot, remain poorly characterized. In this study, we integrated genomics and transcriptomics to elucidate the antifungal mechanisms of strain DJ1. The results demonstrated that DJ1 inhibited F. graminearum with the efficacy of 64.4%, while its polyketide crude extract achieved the control efficacy of 55% in pot experiments against this disease. Whole-genome sequencing revealed a single circular chromosome (3 929 792 bp, GC content of 47%) harboring 12 biosynthetic gene clusters for secondary metabolites, six of which encoded known antimicrobial compounds (macrolactin H, bacillaene, difficidin, surfactin, fengycin, and bacilysin). Transcriptomic analysis identified 243 differentially expressed genes (152 upregulated and 91 downregulated, P < 0.05), which were potentially associated with the antagonistic activity against F. graminearum. KEGG enrichment analysis highlighted activation (P < 0.05) of cysteine/methionine metabolism, pentose phosphate pathway, and polyketide biosynthesis pathways, indicating that DJ1 employed synergistic strategies involving antimicrobial compound synthesis, energy metabolism enhancement, and nutrient competition to suppress pathogens. This study provides a theoretical foundation for developing novel microbial resources and application technologies to combat phytopathogenic fungi.
Fusarium/drug effects*
;
Bacillus/metabolism*
;
Plant Diseases/prevention & control*
;
Antifungal Agents/pharmacology*
;
Genomics
;
Zea mays/microbiology*
;
Transcriptome
;
Gene Expression Profiling
;
Antibiosis
;
Multigene Family
;
Multiomics
2.Immobilization of Lactobacillus bulgaricus with gellan gum and its application in continuous fermentation of D-lactic acid from corn straw.
Yongxin GUO ; Gang WANG ; Kexin LI ; Jiaqi HAN ; Huan CHEN ; Sitong ZHANG ; Yanli LI ; Guang CHEN
Chinese Journal of Biotechnology 2023;39(3):1083-1095
Biorefinery of chemicals from straw is an effective approach to alleviate the environmental pollution caused by straw burning. In this paper, we prepared gellan gum immobilized Lactobacillus bulgaricus T15 gel beads (LA-GAGR-T15 gel beads), characterized their properties, and established a continuous cell recycle fermentation process for D-lactate (D-LA) production using the LA-GAGR-T15 gel beads. The fracture stress of LA-GAGR-T15 gel beads was (91.68±0.11) kPa, which was 125.12% higher than that of the calcium alginate immobilized T15 gel beads (calcium alginate-T15 gel beads). This indicated that the strength of LA-GAGR-T15 gel beads was stronger, and the strain was less likely to leak out. The average D-LA production was (72.90±2.79) g/L after fermentation for ten recycles (720 h) using LA-GAGR-T15 gel beads as the starting strain and glucose as the substrate, which was 33.85% higher than that of calcium alginate-T15 gel beads and 37.70% higher than that of free T15. Subsequently, glucose was replaced by enzymatically hydrolyzed corn straw and fermented for ten recycles (240 h) using LA-GAGR-T15 gel beads. The yield of D-LA reached (1.74±0.79) g/(L·h), which was much higher than that of using free bacteria. The wear rate of gel beads was less than 5% after ten recycles, which indicated that LA-GAGR is a good carrier for cell immobilization and can be widely used in industrial fermentation. This study provides basic data for the industrial production of D-LA using cell-recycled fermentation, and provides a new way for the biorefinery of D-LA from corn straw.
Fermentation
;
Lactobacillus delbrueckii
;
Zea mays
;
Lactic Acid
;
Alginates/chemistry*
;
Glucose
3.The Effect of Saccharin on the Gene Expression of NF-κB and Inflammatory Cytokines in LPS-Stimulated SW480 Colon Cancer Cells
Hyunji CHOI ; Sunlim KIM ; Hyeonjung KANG ; Myunghwan KIM ; Wookyoung KIM
Journal of the Korean Dietetic Association 2019;25(3):217-228
There have been no published studies concerning the anti-inflammatory effects of corn silk on colon cancer cells. Thus, this study was conducted to investigate the effect of corn silk extract containing high levels of maysin on inflammation and its mechanism of action in colon cancer cells. SW 480 human colon cancer cells were treated with 1 µg/mL of lipopolysaccharide (LPS) to induce inflammation, and next they were treated with different concentrations of corn silk extract (0, 5, 10 and 15 µg/mL). The concentrations of nitric oxide (NO) were determined. The mRNA expressions of inducible nitric oxide synthase (iNOS), cyclooxygenase-2 (COX-2), tumor necrosis factor α (TNF-α), interleukin-1beta (IL-1β) and interleukin-6 (IL-6), were determined. Western blot analysis was performed to determine the protein expressions of nuclear factor-kappa B (NF-κB) and mitogen-activated protein kinases, and the latter consists of extracellular signal-related kinase (ERK), c-jun NH2-terminal kinase (JNK) and p38 MAP kinase (p38). The concentration of NO and the mRNA expression of iNOS were significantly and dose-dependently decreased in the corn silk-treated groups (P<0.05). The mRNA expression of TNF-α, IL-1β and IL-6 were significantly increased in the LPS-treated group (P<0.05), but these expressions were significantly and dose-dependently decreased in the corn silk treated groups (P<0.05). The protein expressions of NF-κB (in a dose-dependent fashion), ERK (at 10 and 15 µg/mL), JNK (at 15 µg/mL) and p38 (at 10 and 15 µg/mL) were significantly decreased with corn silk treatments (P<0.05). In conclusion, corn silk extract containing high levels of maysin seems to inhibit the LPS-induced inflammatory responses in SW480 colon cancer cells via the NF-κB pathway.
Blotting, Western
;
Colon
;
Colonic Neoplasms
;
Cyclooxygenase 2
;
Cytokines
;
Gene Expression
;
Humans
;
Inflammation
;
Interleukin-1beta
;
Interleukin-6
;
Mitogen-Activated Protein Kinases
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Nitric Oxide
;
Nitric Oxide Synthase Type II
;
p38 Mitogen-Activated Protein Kinases
;
Phosphotransferases
;
RNA, Messenger
;
Saccharin
;
Silk
;
Tumor Necrosis Factor-alpha
;
Zea mays
4.Dermatoses due to physical forces agents
Journal of the Korean Medical Association 2019;62(4):197-201
Physical forces agents may induce distinctive skin changes. Pressure and friction induce callus and corn. Callus and corn arise at sites of friction or pressure, particularly palms and soles, and especially the bony prominences of the joints. Pressure, shearing forces, friction, and moisture are main etiologic factors of pressure ulcer. The pressure ulcer is caused by ischemia of the underlying structures of the skin, fat, and muscles. Skin has long been known to be a very radiosensitive organ. Skin changes after radiation exposure follow a predictable course dictated by radiation dose, timing, and the biology of the human inflammatory reaction. When the skin is exposed to radiation, acute radiation dermatitis, chronic radiation dermatitis, skin cancer, and radiation recall dermatitis may be developed.
Biology
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Bony Callus
;
Dermatitis
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Friction
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Humans
;
Ischemia
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Joints
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Muscles
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Pressure Ulcer
;
Radiation Exposure
;
Radiodermatitis
;
Skin
;
Skin Diseases
;
Skin Neoplasms
;
Zea mays
6.Molecular characterization and efficacy evaluation of a transgenic corn event for insect resistance and glyphosate tolerance.
Miao-Miao LIU ; Xiao-Jing ZHANG ; Yan GAO ; Zhi-Cheng SHEN ; Chao-Yang LIN
Journal of Zhejiang University. Science. B 2018;19(8):610-619
A transgenic maize event ZD12-6 expressing a Bacillus thuringiensis (Bt) fusion protein Cry1Ab/Cry2Aj and a modified 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) protein G10 was characterized and evaluated. Southern blot analysis indicated that ZD12-6 is a single copy integration event. The insert site was determined to be at chromosome 1 by border sequence analysis. Expression analyses of Bt fusion protein Cry1Ab/Cry2Aj and the EPSPS protein G10 suggested that they are both expressed stably in different generations. Insect bioassays demonstrated that the transgenic plants are highly resistant to Asian corn borer (Ostrinia furnacalis), cotton boll worm (Helicoverpa armigera), and armyworm (Mythimna separata). This study suggested that ZD12-6 has the potential to be developed into a commercial transgenic line.
3-Phosphoshikimate 1-Carboxyvinyltransferase/metabolism*
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Animals
;
Bacillus thuringiensis Toxins
;
Bacterial Proteins/metabolism*
;
China
;
Disease Resistance/genetics*
;
Drug Resistance/genetics*
;
Endotoxins/metabolism*
;
Gene Expression Profiling
;
Glycine/chemistry*
;
Hemolysin Proteins/metabolism*
;
Insecta
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Plant Diseases/prevention & control*
;
Plants, Genetically Modified/genetics*
;
Zea mays/genetics*
;
Glyphosate
7.A corn straw-based diet increases release of inflammatory cytokines in peripheral blood mononuclear cells of dairy cows.
Yan-Yi CHE ; Xiao-Jing XIA ; Bo-Ping HE ; Yuan-Yuan GAO ; Wen-Bo REN ; Hong-Tao LIU ; Jian-Fang LIU ; Ting-Hao HUANG ; Wen-Yu HAN ; Lian-Cheng LEI
Journal of Zhejiang University. Science. B 2018;19(10):796-806
Recent studies have shown that diet can affect the body's immunity. Roughage of dairy cows consists of a variety of plant materials which make different contributions to health. This study investigated the effect of different roughages on the immunity of dairy cows. Serum, peripheral blood mononuclear cells (PBMCs), and milk samples were collected from 20 multiparous mid-lactation cows fed mixed forage (MF)- or corn straw (CS)-based diets. Expression profile analysis was used to detect the differentially expressed genes (DEGs) from PBMCs. The results showed that milk protein in the MF group increased to 3.22 g/100 ml, while that of the CS group milk was 2.96 g/100 ml; by RNA sequencing, it was found that 1615 genes were differentially expressed between the CS group and the MF group among the 24 027 analyzed probes. Gene ontology (GO) and pathway analysis of DEGs suggested that these genes (especially genes coding cytokines, chemokine and its receptors) are involved in the immune response. Results were confirmed at the protein level via detecting the levels of interleukin-2 (IL-2), IL-6, IL-10, IL-12, leptin (LEP), interferon-γ (IFN-γ), transforming growth factor-β1 (TGF-β1), and tumor necrosis factor-α (TNF-α) in peripheral blood by enzyme-linked immunosorbent assay (ELISA) and radioimmunoassay analysis. Our data supported the conclusions that the protein content in milk of the MF group was higher than that of the CS group, the CS-based diets induced more release of cytokines than the MF-based diets in dairy cows' PBMCs, and milk protein content may be affected by cytokines.
Animals
;
Cattle/immunology*
;
Cytokines/physiology*
;
Diet
;
Female
;
Gene Ontology
;
Leukocytes, Mononuclear/immunology*
;
Milk/chemistry*
;
Transforming Growth Factor beta/physiology*
;
Zea mays
8.Dual flow immunochromatographic assay for rapid and simultaneous quantitative detection of ochratoxin A and zearalenone in corn, wheat, and feed samples.
Xian ZHANG ; Ke HE ; Yun FANG ; Tong CAO ; Narayan PAUDYAL ; Xiao-Feng ZHANG ; Hou-Hui SONG ; Xiao-Liang LI ; Wei-Huan FANG
Journal of Zhejiang University. Science. B 2018;19(11):871-883
A one-step dual flow immunochromatographic assay (DICGA), based on a competitive format, was developed for simultaneous quantification of ochratoxin A (OTA) and zearalenone (ZEN) in corn, wheat, and feed samples. The limit of detection for OTA was 0.32 ng/ml with a detection range of 0.53‒12.16 ng/ml, while for ZEN it was 0.58 ng/ml with a detection range of 1.06‒39.72 ng/ml. The recovery rates in corn, wheat, and feed samples ranged from 77.3% to 106.3% with the coefficient of variation lower than 15%. Naturally contaminated corn, wheat, and feed samples were analyzed using both DICGA and liquid chromatography-tandem mass spectrometry (LC-MS/MS) and the correlation between the two methods was evaluated using a regression analysis. The DICGA method shows great potential for simple, rapid, sensitive, and cost-effective quantitative detection of OTA and ZEN in food safety control.
Animal Feed
;
Calibration
;
Chromatography, Affinity
;
Chromatography, Liquid
;
Colloids
;
Food Contamination/analysis*
;
Food Safety
;
Gold
;
Immunoassay/methods*
;
Inhibitory Concentration 50
;
Limit of Detection
;
Metal Nanoparticles
;
Ochratoxins/analysis*
;
Regression Analysis
;
Reproducibility of Results
;
Sensitivity and Specificity
;
Triticum
;
Zea mays
;
Zearalenone/analysis*
9.Low But Continuous Occurrence of Microsporum gypseum Infection in the Study on 198 Cases in South Korea from 1979 to 2016.
Weon Ju LEE ; Jun Hong PARK ; Jun Young KIM ; Yong Hyun JANG ; Seok Jong LEE ; Yong Jun BANG ; Jae Bok JUN
Annals of Dermatology 2018;30(4):427-431
BACKGROUND: Microsporum gypseum has been isolated from South Korea since 1966. However, the incidence of M. gypseum infection is very low. OBJECTIVE: The aim of this study is to add massive data on M. gypseum to the literature and to provide useful information on clinical and mycological characteristics of M. gypseum. METHODS: We retrospectively analyzed data of 198 cases infected with M. gypseum from 1979 to 2016. The identification of M. gypseum was done with mycological examination using 15% KOH preparation and potato corn meal tween 80 agar culture media. RESULTS: The incidence of M. gypseum infection was very low in South Korea, showing a tendency to decrease. Out of 198 cases, men were 94 cases (47.5%) and women were 104 cases (52.5%). Mean age of all patients was 29.83 years old: 24.97 years old in men and 34.22 years old in women. M. gypseum infection occurred most frequently in September (16.7%) and August (16.2%). The most common clinical type of M. gypseum infection was tinea corporis (38.4%). CONCLUSION: M. gypseum infection shows very low incidence but still remains around us until recent years. We should keep in mind the characteristics of M. gypseum.
Agar
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Culture Media
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Epidemiology
;
Female
;
Humans
;
Incidence
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Korea*
;
Male
;
Meals
;
Microsporum*
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Polysorbates
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Retrospective Studies
;
Solanum tuberosum
;
Tinea
;
Zea mays
10.A Case of Molluscum Contagiosum Developed Symmetrically on Both Heels That Are Weight-bearing Area.
Dong Won LEE ; Dae Yeon KIM ; Hyo Hyun AHN ; Young Chul KYE ; Soo Hong SEO
Korean Journal of Dermatology 2018;56(8):517-518
No abstract available.
Heel*
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Molluscum Contagiosum*
;
Weight-Bearing*
;
Zea mays

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