1.3D-EDiffMG: 3D equivariant diffusion-driven molecular generation to accelerate drug discovery.
Chao XU ; Runduo LIU ; Yufen YAO ; Wanyi HUANG ; Zhe LI ; Hai-Bin LUO
Journal of Pharmaceutical Analysis 2025;15(6):101257-101257
Structural optimization of lead compounds is a crucial step in drug discovery. One optimization strategy is to modify the molecular structure of a scaffold to improve both its biological activities and absorption, distribution, metabolism, excretion, and toxicity (ADMET) properties. One of the deep molecular generative model approaches preserves the scaffold while generating drug-like molecules, thereby accelerating the molecular optimization process. Deep molecular diffusion generative models simulate a gradual process that creates novel, chemically feasible molecules from noise. However, the existing models lack direct interatomic constraint features and struggle with capturing long-range dependencies in macromolecules, leading to challenges in modifying the scaffold-based molecular structures, and creates limitations in the stability and diversity of the generated molecules. To address these challenges, we propose a deep molecular diffusion generative model, the three-dimensional (3D) equivariant diffusion-driven molecular generation (3D-EDiffMG) model. The dual strong and weak atomic interaction force-based long-range dependency capturing equivariant encoder (dual-SWLEE) is introduced to encode both the bonding and non-bonding information based on strong and weak atomic interactions. Additionally, a gate multilayer perceptron (gMLP) block with tiny attention is incorporated to explicitly model complex long-sequence feature interactions and long-range dependencies. The experimental results show that 3D-EDiffMG effectively generates unique, novel, stable, and diverse drug-like molecules, highlighting its potential for lead optimization and accelerating drug discovery.
2.Advances in application of pediatric early warning system score in emergency transport
Yufen HUANG ; Zhihan CHEN ; Yiner HUANG
International Journal of Pediatrics 2024;51(7):481-484
Pediatric early warning system(PEWS)monitors the children's temperature,blood pressure,heart rate,respiration,consciousness,oxygen saturation and various physiological indicators to form a score,which helps medical staff to identify the changes of children's condition in the early stage,with high sensitivity and specificity. In addition,PEWS is of great help in the transportation of children under emergent conditions or with critical illness. PEWS application can greatly reduce the risk of in-hospital and out-of-hospital transport,optimize the allocation of medical staff,and promote the early identification and treatment of children with serious conditions. However,the lack of standard PEWS and related guidelines,as well as the limited development of basic theories,can affect the consistency of the definition,implementation and effective evaluation of PEWS. Therefore,this article will review the development of PEWS and its application in emergency transport,so as to provide reference for improving the quality of emergency pediatric transport.
3.A scoping review of the needs of patients undergoing first surgery for breast cancer
Zhangqi LI ; Huihui LIU ; Lu REN ; Shujin YUE ; Yufen LIU ; Jingyuan HUANG ; Chunxiang SU
Chinese Journal of Modern Nursing 2023;29(34):4735-4741
Objective:To summarize the research status and contents of the needs of breast cancer patients undergoing first operation.Methods:The articles related to the needs of patients undergoing first surgery for breast cancer were searched by computer in PubMed, Cochrane Library, Web of Science, Embase, China National Knowledge Infrastructure, Wanfang Database, VIP and China Biology Medicine disc. The search period was from January 1, 2013 to December 31, 2022.Results:A total of 17 articles were included, and the research design mainly focused on qualitative and observational studies. Breast cancer patients with first operation had a high degree of demand, and the demand content was diverse, mainly including information needs, health guidance needs, emotional needs and social support needs. The needs of breast cancer patients with different ages and different treatment stages were different.Conclusions:It is suggested that a personalized needs intervention plan should be formulated to meet the diversified needs of breast cancer patients.
4.Follow-up study of fetal cardiac birth defects after prenatal diagnosis and graded counseling
Junjun SHEN ; Chengcheng PANG ; Liuqing YANG ; Xieyi LIN ; Yingyu WANG ; Yuping HUANG ; Yufen LI ; Wei PAN
Chinese Journal of Obstetrics and Gynecology 2022;57(4):278-283
Objective:To explore accurate prenatal diagnosis, full-coverage graded counseling and follow-up for the fetus with cardiac birth defects (CBD).Methods:CBD fetus diagnosed prenatal by echocardiography from January 2018 to December 2020 in Guangdong Provincial People's Hospital were enrolled. Fetal CBD was graded (Ⅰ-Ⅵ) according to prognosis and possible operation time after birth, and the classification criteria and common diseases included were proposed. After the prenatal grading counseling, the outcome of the fetus was followed-up. The induced labor rate, live birth rate, prenatal and postnatal ultrasound diagnosis coincidence rate and other indicators were calculated. The disease composition ratio, prognosis of fetus with different grades and the outcome of integrated treatment were analyzed.Results:The detection rate of fetal CBD was up to 16.2% (1 971/12 188), 30 cases of which were excluded. A total of 1 941 cases were included in this study, including 196 cases (10.1%) of gradeⅠ, 433 cases (22.3%) of gradeⅡ, 615 cases (31.7%) of grade Ⅲ, 261 cases (13.4%) of grade Ⅳ, 388 cases (20.0%) of gradeⅤ, 48 cases (2.5%) of grade Ⅵ. Grade Ⅱ and gradeⅢ (the operation time was within 1 year after birth) accounted for 54.0% (1 048/1 941). The distribution of some diseases in different grades had obvious proportion advantage, which was representative. Among 1 747 CBD fetus, 736 cases (induced labor rate 42.1%) chose to terminate pregnancy due to CBD. Of the 1 010 live births, 975 cases (96.5%) had the same prenatal and postnatal diagnosis, 3 cases were missed diagnosis and 32 cases were misdiagnosed. The diagnostic accuracy of live births with severe and complex congenital heart disease was 383 out of 389 (98.5%). A total of 258 cases have received surgery or intervention. The age at the time of surgery or intervention was different among grades( χ2 =47.3, P<0.001). With the improvement of prognosis from gradeⅠ to Ⅴ, the live birth rate increased and the induced labor rate decreased accordingly; the difference between grades was significant( χ2 =623.6, P<0.001). Conclusions:Prenatal diagnosis and graded counseling is important in the integrated model. Fetal CBD grading could refine post-natal treatment strategies, guide delivery decisions and become an evaluation standard.
5.External application of traditional Chinese medicine on treatment of breast cancer related lymphedema: a systematic review
Lifang MA ; Yufen LIU ; Yanbing QING ; Wenqi HUANG ; Zhangqi LI ; Shujin YUE ; Chunxiang SU
Chinese Journal of Practical Nursing 2022;38(28):2234-2241
Objective:To systematic review the efficacy and safety of external application of traditional Chinese medicine on treatment of breast cancer related lymphedema.Methods:CNKI, Wanfang Data, VIP, Sino-Med, The Cochrane Library, PubMed, Web of Science were searched for related randomized controlled trials, the retrieval time was from inception to May 25, 2020. Two researchers independently screened and evaluated the included studies. Meta-analysis was performed by RevMan 5.4 software.Results:A total of 16 studies involving 1 315 patients with breast cancer related lymphedema were included, and the methodological quality of the included studies was not high. Compared with conventional treatment, external application of traditional Chinese medicine combined with conventional treatment had advantages in improving the total efficiency( P<0.01) and quality of life( P<0.01), reducing pain( P<0.01) and improving upper limb function( P<0.01), without obvious adverse reactions( P>0.05), but there was no improvement in depression( P>0.05). Compared with conventional treatment, external application of traditional Chinese medicine could improve the total efficiency( P<0.01). Compared with placebo sticker combined with conventional treatment, external application of traditional Chinese medicine combined with conventional treatment can reduce circumference( P<0.05) and reduce pain( P<0.01), without obvious adverse reactions( P>0.05). Conclusions:Available evidence suggests that external application of traditional Chinese medicine may be a potential treatment method for breast cancer related lymphedema. Due to the poor methodological quality of the included studies, high-quality randomized controlled trials are still needed.
6.Nano-bio interfaces effect of two-dimensional nanomaterials and their applications in cancer immunotherapy.
Zhongmin TANG ; Yufen XIAO ; Na KONG ; Chuang LIU ; Wei CHEN ; Xiangang HUANG ; Daiyun XU ; Jiang OUYANG ; Chan FENG ; Cong WANG ; Junqing WANG ; Han ZHANG ; Wei TAO
Acta Pharmaceutica Sinica B 2021;11(11):3447-3464
The field of two-dimensional (2D) nanomaterial-based cancer immunotherapy combines research from multiple subdisciplines of material science, nano-chemistry, in particular nano-biological interactions, immunology, and medicinal chemistry. Most importantly, the "biological identity" of nanomaterials governed by bio-molecular corona in terms of bimolecular types, relative abundance, and conformation at the nanomaterial surface is now believed to influence blood circulation time, bio-distribution, immune response, cellular uptake, and intracellular trafficking. A better understanding of nano-bio interactions can improve utilization of 2D nano-architectures for cancer immunotherapy and immunotheranostics, allowing them to be adapted or modified to treat other immune dysregulation syndromes including autoimmune diseases or inflammation, infection, tissue regeneration, and transplantation. The manuscript reviews the biological interactions and immunotherapeutic applications of 2D nanomaterials, including understanding their interactions with biological molecules of the immune system, summarizes and prospects the applications of 2D nanomaterials in cancer immunotherapy.
7.A multi-center survey on knowledge of venous thromboembolism among nurses in Tibet
Yuan XU ; Duo GA ; Liyun ZHU ; Yanling MENG ; Xiaojie WANG ; Ping HUANG ; Yu WANG ; Haibo DENG ; Lei WANG ; Xu YANG ; Yufen MA
Chinese Journal of Modern Nursing 2021;27(4):437-442
Objective:To explore the current status and influencing factors of venous thromboembolism (VTE) knowledge among nurses of hospitals in Tibet, so as to provide guidance for VTE nursing in Tibet.Methods:From November to December 2019, convenience sampling was used to conduct a VTE knowledge survey of 1 117 nurses in 59 hospitals from 7 cities (regions) of the Tibet Autonomous Region using the VTE Knowledge Questionnaire for Clinical Nurses. Binary Logistic regression analysis was used to explore the influencing factors of VTE knowledge scores among nurses.Results:Among nurses of the Tibet Autonomous Region, the total VTE knowledge score was (36.70±15.17) , of which the basic knowledge dimension score was (7.13±2.99) , and the risk assessment dimension score was (14.75±7.61) , and the basic prevention dimension score was (3.92±1.99) , and the physical prevention dimension score was (4.73±2.62) points, and the drug prevention dimension score was (1.96±1.29) , and the VTE post-processing dimension score was (4.22±2.35) . The average score rate of VTE knowledge among nurses in Tibet was 48.94%, and the knowledge of nurses was at an intermediate to low level. In the use of preventive measures, nurses had insufficient knowledge, including physical prevention score rate of 36.38%, drug prevention score rate 39.20%. Logistic regression analysis showed that professional title, hospital level, and whether or not they had participated in training were independent factors influencing the qualification of nurses' VTE knowledge score ( P<0.05) . Conclusions:The nurses in Tibet have insufficient knowledge of VTE. Managers need to carry out targeted training for nurses with different characteristics and the deficiencies of knowledge, to promote nurses to apply what they have learned to clinical practice effectively, and to ensure the quality of VTE care.
8.Advices on the prevention and control of nosocomial infection of COVID-19 within children′s hospitals
Hongzhen XU ; Shuohui CHEN ; Junfen FU ; Qiang SHU ; Zhimin CHEN ; Wei SUN ; Dan WANG ; Haihong ZHU ; Hongqin ZHOU ; Guolan HUANG ; Zangzang FU ; Hangyan ZHAO ; Bin WANG ; Xiaoqing WU ; Yuqin LIANG ; Yufen HUANG ; Meihong GU ; Wei WANG
Chinese Journal of Hospital Administration 2020;36(4):316-319
The epidemic of COVID-19 has become the topmost public health threat worldwide. The authors suggested that in addition to strengthening the organization and leadership of the abovementioned work, greater attention be paid to establishing and improving the prevention and control mechanism.Furthermore, special efforts should be given to the safety of the medical workers, by strengthening their infection monitoring and outbreak management. Medical workers in different work areas and positions should be placed under careful protection with due cleaning and disinfection measures. The protection during specimen collection, transportation and medical waste management should also be prioritized. Such special issues in the management of pediatric patients, as allocation of nurses, the screening and management of caregivers, the problem of breastfeeding, and the disinfection of children′s toys and diapers were discussed. This paper also put forward management suggestions for the outpatient department, isolation ward and other key departments, which aim to guide the prevention and control of COVID-19 nosocomial infection in the pediatric outpatient and ward.
9. Advices on the prevention and control of nosocomial infection of novel coronavirus within children’s hospitals
Hongzhen XU ; Shuohui CHEN ; Junfen FU ; Qiang SHU ; Zhimin CHEN ; Wei SUN ; Dan WANG ; Haihong ZHU ; Hongqin ZHOU ; Guolan HUANG ; Zangzang FU ; Hangyan ZHAO ; Bin WANG ; Xiaoqing WU ; Yuqin LIANG ; Yufen HUANG ; Meihong GU ; Wei WANG
Chinese Journal of Hospital Administration 2020;36(0):E001-E001
The pneumonia caused by the novel coronavirus (2019-nCoV), which began in December 2019, has become the most serious public health problem, threatening people's health and life. This threat is posing a severe challenge on the diagnosis and treatment of 2019-nCoV infection, the prevention and control of hospital cross infection of medical staff. It is suggested that in addition to strengthening the organization and leadership of the abovementioned work, establishing and improving the prevention and control mechanism deserve greater attention. Furthermore, special attention should be given to the safety of the medical staff, strengthening their infection monitoring and outbreak management. Medical staff in different work areas and positions should be placed under careful protection, cleaning and disinfection measures. The protection during specimen collection, transportation and medical waste management should also be prioritized. This paper also put forward management suggestions for the outpatient department, isolation ward and other key departments. These measures are proposed to provide a guidance for the prevention and control of 2019-nCoV nosocomial infection in the pediatric outpatient and ward.
10.Analysis of the epidemic characteristics of children with respiratory virus in Maoming
Peipei LI ; Junwei NIE ; Woman LIU ; Yufen TANG ; Jingmou YANG ; Dongmei HUANG
International Journal of Laboratory Medicine 2018;39(5):581-584
Objective Based on the screening of respiratory viruses in children with respiratory tract infection in Maoming,the viral pathogens in children with respiratory tract infection were investigated,the epidemic trend of children with respiratory tract infection in the region was grasped,so as to provide the basis for the disease diagnosis of children with respiratory tract infection.Methods With direct immunofluorescence,7 common respiratory viruses in nasopharyngeal secretions were detected in 13 148 patients with respiratory infection in our hospital,including adenovirus (ADV),respiratory syncytial virus (RSV),influenza virus A (FLUA),influenza virus B FLUB) and parainfluenza (PIV).Results In 13 148 cases,the respiratory virus positive were found in 3 308 cases,the total positive rate was 25.16%,the positive detection rate of RSV was the highest (17.39 %),and the detection rate of respiratory virus has obvious seasonal characteristics,with the highest detection rate in the first quarter,and mainly concentrated in the population under the age of three.Conclusion RSV was the first of the 7 common respiratory viruses detected,and the virus infection was associated with age and season.

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