1.Microbiome, metabolome, and transcriptome analyses in esophageal squamous cell carcinoma: insights into immune modulation by F. nucleatum.
Xue ZHANG ; Jing HAN ; Yudong WANG ; Li FENG ; Zhisong FAN ; Yu SU ; Wenya SONG ; Lan WANG ; Long WANG ; Hui JIN ; Jiayin LIU ; Dan LI ; Guiying LI ; Yan LIU ; Jing ZUO ; Zhiyu NI
Protein & Cell 2025;16(6):491-496
2.Analysis of the mechanism of Zangjiangzhi capsule in the treatment of hyperlipidemia based on its ingredients identified by UHPLC-Q-Exactive-Orbitrap-MS
Changting He ; Yuling Zhao ; Yongchun Huang ; Yudong Su ; Shoude Zhang
Journal of Traditional Chinese Medical Sciences 2025;2025(1):44-55
Objective:
To explore the mechanism of action of Zangjiangzhi capsule (ZJZC) in treating hyperlipidemia (HLP).
Methods:
The components of ZJZC were analyzed and identified using ultra-high performance liquid chromatography with Q-Exactive Orbitrap tandem mass spectrometry (UHPLC-Q-Exactive-Orbitrap-MS/MS). Network pharmacology analysis was used to explore the mechanism of action of ZJZC in HLP treatment. The SwissTargetPrediction database was used to predict compound targets, and GeneCards, DisGeNet, OMIM, and DRUGBANK databases were used to identify HLP-related targets. Protein–protein interaction diagrams were constructed using the STRING database. The targets were subjected to gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis. The “herb-ingredient-target” network was visualized using Cytoscape. Preliminary validation was performed using molecular docking and enzyme-linked immunosorbent assay.
Results:
Ninety compounds were identified in ZJZC, including 34 flavonoids, 12 phenols, 10 terpenoids, 10 alkaloids, 8 organic acids, 8 anthraquinones, and 9 other compounds. In total, 904 targets were identified for these compounds. Among them, 158 targets intersected with the HLP target network. Network pharmacology analysis showed that MAPK1, PPAR-α, RXRA, HSP90AA1, PIK3R1, AKT1, PIK3CA, IL6, TNF, and ESR1 are the key targets of action. KEGG enrichment analysis identified 164 pathways. Among these, the AGE-RAGE signaling pathway in diabetic complications, lipid and atherosclerosis pathways, regulation of lipids in adipocytes, and insulin resistance are related to HLP. Molecular docking showed good affinity between the key targets and ingredients. Further, ZJZC treatment in mice resulted in lower expression of MAPK1 protein and increased expression of PPAR-α protein, which have been shown to be strongly associated with HLP.
Conclusions
This study showed that ZJZC contains various active ingredients and can modulate multiple targets and pathways associated with HLP, providing evidence at the molecular level for its clinical application in the treatment of HLP.
4.Effects and mechanisms of anlotinib on proliferation,apoptosis,migration,and inva-sion in MYCN-amplified neuroblastomas
Chinese Journal of Clinical Oncology 2024;51(24):1250-1254
Objective:To study the effects and mechanisms of anlotinib on the proliferation,migration,invasion,and apoptosis of MYCN-amplified neuroblastomas(NB).Methods:Two MYCN-amplified NB cell lines were treated with varying concentrations of anlotinib.CCK8 and clone formation assays were employed to detect cell proliferation,flow cytometry was used to detect cell apoptosis,scratch tests were performed to determine cell migration,and Transwell assays were used to detect cell invasion.Results:CCK8 assays indicated that anlotinib inhibited proliferation in MYCN-amplified NB cell lines in a concentration-and time-dependent manner.Clone formation assays showed that anlotinib significantly inhibited cell clone formation(P<0.000 1).The results of the apoptosis experiment showed that anlotinib significantly promoted apoptosis in MYCN-amplified NB cell lines(P<0.000 1).Scratch assays showed that anlotinib significantly reduced the migration ability of MYCN-amplified NB cells(P<0.000 1).Transwell assays revealed that anlotinib significantly inhibited the invasive abilities of MYCN-amplified NB cell lines(P<0.000 1).Western blot analysis demonstrated that anlotinib significantly reduced the phosphorylation of VEGFR2 and AKT proteins in MYCN-amplified NB cells.The expression of the key downstream proteins N-cadherin and Bcl-2 was significantly down-regulated,whereas the expression of E-cadherin and Bax was significantly upregulated.Conclusions:Anlotinib markedly inhibits the prolifer-ation,migration,and invasion of MYCN-amplified NB cells and induces apoptosis via the VEGFR2/PI3K/AKT signaling pathway.
5.Effects and mechanisms of anlotinib on proliferation,apoptosis,migration,and inva-sion in MYCN-amplified neuroblastomas
Chinese Journal of Clinical Oncology 2024;51(24):1250-1254
Objective:To study the effects and mechanisms of anlotinib on the proliferation,migration,invasion,and apoptosis of MYCN-amplified neuroblastomas(NB).Methods:Two MYCN-amplified NB cell lines were treated with varying concentrations of anlotinib.CCK8 and clone formation assays were employed to detect cell proliferation,flow cytometry was used to detect cell apoptosis,scratch tests were performed to determine cell migration,and Transwell assays were used to detect cell invasion.Results:CCK8 assays indicated that anlotinib inhibited proliferation in MYCN-amplified NB cell lines in a concentration-and time-dependent manner.Clone formation assays showed that anlotinib significantly inhibited cell clone formation(P<0.000 1).The results of the apoptosis experiment showed that anlotinib significantly promoted apoptosis in MYCN-amplified NB cell lines(P<0.000 1).Scratch assays showed that anlotinib significantly reduced the migration ability of MYCN-amplified NB cells(P<0.000 1).Transwell assays revealed that anlotinib significantly inhibited the invasive abilities of MYCN-amplified NB cell lines(P<0.000 1).Western blot analysis demonstrated that anlotinib significantly reduced the phosphorylation of VEGFR2 and AKT proteins in MYCN-amplified NB cells.The expression of the key downstream proteins N-cadherin and Bcl-2 was significantly down-regulated,whereas the expression of E-cadherin and Bax was significantly upregulated.Conclusions:Anlotinib markedly inhibits the prolifer-ation,migration,and invasion of MYCN-amplified NB cells and induces apoptosis via the VEGFR2/PI3K/AKT signaling pathway.
6.Adrenocortical adenoma with inferior vena cava tumor thrombus: a case report
Wenjian LUO ; Yudong TIAN ; Yang SU ; Lingang CUI ; Qingjun MENG ; Yu ZHANG ; Ling HAN
Chinese Journal of Urology 2023;44(10):783-784
The clinical data of a 64-year-old patient with adrenocortical adenoma complicated with inferior vena cava tumor thrombus(IVCTT) were retrospectively analyzed. The patient was admitted becourse of intermittent dizziness for 4 months. CT examination revealed right adrenal tumor, and IVCTT was found in operation. Adrenal cortical adenoma needs to be distinguished from adrenal cortical carcinoma pathologically. Preoperative color Doppler ultrasonography, CT angiography or inferior vena cava angiography can confirm the diagnosis of IVCTT and tumor thrombus grade, and different surgical methods should be selected according to tumor thrombus grade.
7.Severe erythema multiforme induced by febuxostat
Wenjian LIAO ; Yonghang LUO ; Yudong LI ; Yong SU
Adverse Drug Reactions Journal 2023;25(3):180-182
A 49-year-old female patient took febuxostat 20 mg once daily orally due to chronic kidney disease and hyperuricemia. On day 9 of medication, the patient developed facial hot flashes, and then purplish red maculopapules gradually appeared on the head, face, trunk, and both lower limbs. The rash were aggravated and spread gradually all over the body, involving the eyes, mouth, and vaginal mucosa. Lysis blisters appeared at the waist, and the area of epidermalysis was less than 10%. Laboratory tests showed white blood cell count 2.1×10 9/L, neutrophil count 1.7×10 9/L, hemoglobin 59 g/L, platelet count 97×10 9/L, C-reactive protein 105.6 mg/L; serum creatinine 1 062 μmol/L, and uric acid 647 μmol/L; human leukocyte antigen B*5801 allele was positive. Severe erythema multiforme induced by febuxostat was considered. Febuxostat was stopped immediately and treatments including protective isolation care, methylprednisolone, immunoglobulin, hemodialysis combined with hemoperfusion were given. On day 16 of treatments, black scab was found on the lip mucosa, and 30% skin scab peeled off. After 19 days of treatments, most of the scabs of whole body fell off, and new skin was visible. Laboratory tests showed that white blood cell count and platelet count returned to normal, C-reactive protein was 2.41 mg/L, serum creatinine was 582 μmol/L, and uric acid was 424 μmol/L.
8.Severe erythema multiforme induced by febuxostat
Wenjian LIAO ; Yonghang LUO ; Yudong LI ; Yong SU
Adverse Drug Reactions Journal 2023;25(3):180-182
A 49-year-old female patient took febuxostat 20 mg once daily orally due to chronic kidney disease and hyperuricemia. On day 9 of medication, the patient developed facial hot flashes, and then purplish red maculopapules gradually appeared on the head, face, trunk, and both lower limbs. The rash were aggravated and spread gradually all over the body, involving the eyes, mouth, and vaginal mucosa. Lysis blisters appeared at the waist, and the area of epidermalysis was less than 10%. Laboratory tests showed white blood cell count 2.1×10 9/L, neutrophil count 1.7×10 9/L, hemoglobin 59 g/L, platelet count 97×10 9/L, C-reactive protein 105.6 mg/L; serum creatinine 1 062 μmol/L, and uric acid 647 μmol/L; human leukocyte antigen B*5801 allele was positive. Severe erythema multiforme induced by febuxostat was considered. Febuxostat was stopped immediately and treatments including protective isolation care, methylprednisolone, immunoglobulin, hemodialysis combined with hemoperfusion were given. On day 16 of treatments, black scab was found on the lip mucosa, and 30% skin scab peeled off. After 19 days of treatments, most of the scabs of whole body fell off, and new skin was visible. Laboratory tests showed that white blood cell count and platelet count returned to normal, C-reactive protein was 2.41 mg/L, serum creatinine was 582 μmol/L, and uric acid was 424 μmol/L.
9.Application of SM-PCR to detect plasma ctDNA in the treatment of patients with ad-vanced lung adenocarcinoma
Ran ZUO ; Yudong SU ; Zhaoting MENG ; Xinyue WANG ; Li LIN ; Cuicui ZHANG ; Jinliang CHEN ; Yajie WANG ; Pingping LIU ; Jinpu YU ; Kai LI ; Peng CHEN
Chinese Journal of Clinical Oncology 2019;46(8):384-388
Objective: To investigate the application of single-molecule PCR (SM-PCR) in the detection of plasma ctDNA for the treat-ment of patients with advanced lung adenocarcinoma. Methods: In total, 30 patients diagnosed with advanced lung adenocarcinoma were enrolled between June 2017 and May 2018. ctDNA fragments of the target genes (EGFR, KRAS, BRAF, ALK, HER2, and TP53) from the blood samples were enriched by SM-PCR, and DNA libraries were prepared. Finally, a high-throughput sequencing was performed. The EGFR detection of tumor tissue samples was performed using real-time fluorescence PCR based on the amplification refractory mutation system (ARMS) and consistency in the results of EGFR mutation detection in the plasma and tissue was compared. Results:The results of both the methods were consistent (Kappa=0.867, P<0.001). The McNemar's test also indicated that the results are not statistically different (P=0.500). Conclusions: SM-PCR can be used for the detection of plasma EGFR mutations. The target detection sites are more comprehensive and multiple mutations can be detected at the same time. Results of the analysis are more precise and can be absolutely quantified.
10.Combined Let-7a and H19 Signature: A Prognostic Index of Progression-Free Survival in Primary Breast Cancer Patients.
Qiannan GUO ; Runyao WEN ; Bin SHAO ; Yudong LI ; Xin JIN ; Heran DENG ; Jiannan WU ; Fengxi SU ; Fengyan YU
Journal of Breast Cancer 2018;21(2):142-149
PURPOSE: The long non-coding RNA H19, a conservatively imprinted gene, acts as a molecular sponge for the let-7 family, which has been identified as a set of tumor suppressors. However, the combined prognostic value of H19 and let-7a signature in breast cancer patients remains unclear. METHODS: In this research we assessed the prognostic value of the combined H19 and let-7a signature in breast cancer patients by retrospectively reviewing that data of 79 patients who underwent neoadjuvant chemotherapy; we also investigated the expression and function of H19 in breast cancer cell lines in vitro. Survival data were calculated using the Kaplan-Meier method and compared using the log-rank test. Univariate and multivariate survival analyses were conducted using the Cox proportional hazards regression method. As determined using X-tile, the optimal cutoff value for the risk score to assess progression-free survival (PFS) based on the combined signature was –0.1. RESULTS: Patients with an overall positive treatment response had higher let-7a and lower H19 levels. In addition, let-7a expression was negatively correlated with H19 expression. Patients with a risk score of >–0.1 had shorter overall survival and PFS. In vitro data showed that chemoresistant cell lines exhibit higher H19 and lower let-7a levels and knockdown H19 restores paclitaxel sensitivity. CONCLUSION: Our results suggest that the combined let-7a and H19 signature is a novel prognostic factor for breast cancer patients treated with neoadjuvant chemotherapy.
Breast Neoplasms*
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Breast*
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Cell Line
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Disease-Free Survival*
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Drug Therapy
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Humans
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In Vitro Techniques
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Methods
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Neoadjuvant Therapy
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Paclitaxel
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Porifera
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Prognosis
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Retrospective Studies
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RNA, Long Noncoding


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