1."Disease-syndrome-therapy" Spontaneous Abortion Models and Application Trends of Single-cell Multimodal Omics: A Review
Linwen DENG ; Ying TANG ; Yi YANG ; Shuguang ZHANG ; Weijun DING ; Hang ZHOU
Chinese Journal of Experimental Traditional Medical Formulae 2023;29(14):191-203
The incidence of spontaneous abortion (SAB) has been increasing year by year, and its etiology is complex, with limited treatment options, which poses a serious threat to social stability. The "disease-syndrome-therapy" research model can significantly improve the clinical efficacy of traditional Chinese medicine (TCM) for preventing miscarriage, but there has always been a lack of key and recognized diagnostic and treatment evaluation markers, which need to be further explored to establish a scientific and unified evaluation standard system. It is proposed to collect existing "disease-syndrome-therapy" SAB animal models, transplant and improve the model evaluation indicators, evaluate the degree of match between SAB animal models and the clinical characteristics of TCM and Western medicine diseases and syndromes, and compare the advantages and disadvantages of different SAB animal models in terms of construction methods, target selection, and evaluation indicators. In addition, the frontiers of TCM experimental research will be explored. In view of the current status and related bottlenecks of molecular biomarkers research on SAB TCM animal models, a single-cell multimodal omics research strategy will be proposed to break through the related evaluation defects of the "disease-syndrome-therapy" SAB and analyze the differences in various cell types, cell subpopulations, spatiotemporal trajectories, and gene expression in the mother-fetal interface tissue at the single-cell level. This will provide accurate guidance and model animal platform support for the in-depth study of disease-syndrome models, Zang-fu biology, and novel targeted drugs. It will also provide a basis for establishing a stable and repeatable "disease-syndrome-therapy" SAB animal model and evaluation indicator system, which is beneficial for the long-term development of TCM reproductive animal model research.
2.Study on the Spatial-Temporal Deduction of the Mechanism and the Modernization of the System of"Syndrome-Prescription-Herbs"in tocolysis Based on the Theory of"Fetal Stem is Tied to the Spleen"
Hang ZHOU ; Xiaoyan ZHENG ; Linwen DENG ; Qian ZENG ; Weijun DING
World Science and Technology-Modernization of Traditional Chinese Medicine 2023;25(6):1914-1926
Modern Traditional Chinese Medicine(TCM)physicians believed that"reproduction depends on the kidney"theory is the key in treating fetal leakage,fetal restlessness,slippery fetus and other diseases.However,before the Ming and Qing Dynasties,ancient physicians paid special attention to the theory of"Qi and blood in the spleen and stomach".The"the stem of fetal ties the spleen"came from the summary of Zhao Xianke's"Handan manuscripts"based on analogy of nature in Ming dynasty.However,at present,the relevant research reports on"spleen"and tocolysis are fragmented,and the theoretical traceability,clinical effects and experimental research are not systematically discussed.Based on the"fetal stem ties the spleen"theory,through integrated research,taking the differentiation of ancient and modern theories of traditional Chinese medicine gynecology as the"longitude",and the progress of modern biological research on"syndromes,prescriptions and components"as the"latitude".This study is an initial attempt to reveal the key inflection points deductively in the empty space(territorial schools)during(history and history of)tocolysis,and to systematically explore the"spleen main Qi","spleen main transportation","spleen main rising Qing"and"spleen main muscle",which are associated with the progress of the objectification and the bottleneck of research on the treatment of tocolysis.Furthermore,it is proposed that TCM prescription syndrome metabolism and spatiotemporal omics are the important trends to solve the disputes and difficulties in the study of tocolysis in the future,and provide a new reference idea for the inheritance,innovation,breakthrough and accurate research of modern TCM reproductive theory.
3.Difference in Network Mechanism of Shoutaiwan and Juyuanjian in Reversing Pathology of Decidua of Spontaneous Abortion Patients: Based on "Uterine Collaterals Connecting Kidney" and "Fetal Collaterals Connecting Spleen" Theory
Hang ZHOU ; Xiaoyan ZHENG ; Huan WANG ; Qian ZENG ; Linwen DENG ; Weijun DING
Chinese Journal of Experimental Traditional Medical Formulae 2022;28(20):186-200
ObjectiveTo explore difference in the mechanism of Shoutaiwan, a representative kidney-tonifying and abortion-preventing formula, and Juyuanjian, a typical spleen-invigorating and abortion-preventing formula in reversing the pathology of decidua of spontaneous abortion (SA) patients and to expound the connotation of "uterine collaterals connecting kidney" and "fetal collaterals connecting spleen" theory. MethodThe targets of SA were retrieved from GeneCards, followed by gene ontology-biological process (GO-BP) annotation. Based on Cytoscape and previous research, the main processes and core targets were screened out. High-performance liquid chromatography-mass spectrometry (HPLC-MS) was used to identify the potential active components of Shoutaiwan and Juyuanjian and the regulatory networks were constructed. SA was induced in rats and the model rats were treated with Shoutaiwan and Juyuanjian at the same unit. Hematoxylin and eosin (HE) staining, transmission electron microscopy (TEM), enzyme-linked immunosorbent assay (ELISA), immunohistochemistry (IHC), immunofluorescence (IF), and other methods were employed to verify the mechanisms against miscarriage. ResultThe dysregulation of cell adhesion, inflammatory response, cell death, and angiogenesis was the core pathological process of SA. A total of 13 potential specific active components of Shoutaiwan and 14 active components of Juyuanjian were screened out. The regulatory networks showed that the potential active components of the two prescriptions modulated vascular endothelial growth factor (VEGF), interleukin (IL)-2, estrogen receptor (ESR)-1, matrix metalloproteinase-9 (MMP-9), and other targets to regulate the pathological process of SA. The two can significantly improve the pregnancy rate and the integrity rate and blood supply of decidua cells, control the apoptosis morphology and the expression of estrogen (E2), progesterone (P), and its receptor, and down-regulate the expression of MMP-2, MMP-9, IL-2, and IL-6 in decidua tissue of SA rats. At the same time, they up-regulated the expression of anti-apoptotic protein B-cell lymphoma-2 (Bcl-2) and IL-4. Shoutaiwan significantly up-regulated the expression of VEGF, and Juyuanjian significantly down-regulated the expression of E-cadherin (E-Cad). ConclusionBoth Shoutaiwan and Juyuanjian regulate the core pathological process of SA to prevent miscarriage. At the same unit, Shoutaiwan is overall superior to Juyuanjian. Shoutaiwan is better than Juyuanjian in regulating angiogenesis and Juyuanjian is superior to Shoutaiwan in regulating cell adhesion. This conclusion can partly explain the biological basis of "treating the same disease with different methods", and provide objective data reference for the identification of quality marker (Q-marker) of anti-miscarriage Chinese medicine and further study of formula-syndrome metabolome.
4.FibroTouch diagnostic efficiency and influencing factors for liver fibrosis in autoimmune liver diseases
Jingjing YAN ; Weijun WANG ; Huiqian FAN ; Xiaoli PAN ; Fan DU ; Xiaoling DENG ; Yuhu SONG ; Jin YE ; Keshu XU ; Ling YANG
Chinese Journal of Hepatology 2020;28(12):1048-1051
FibroTouch (FT) has been used widely in clinic. Studies of the FT diagnostic efficiency and influencing factors of liver stiffness measurement (LSM) of liver fibrosis in autoimmune liver diseases (AILD) have shown that FT has a good diagnostic efficiency and accuracy, especially in AIH. However, for patients with primary biliary cholangitis and overlap syndrome of autoimmune hepatitis, FT results should be vigilant. In addition, the diagnostic efficiency of FT. Notably, when using FT to diagnose AILD, the value of elastic stiffness depends on five influencing factors, such as, age, total bile acid, international standardized ratio, FIB-4 index, and prothrombin time.
5.Bioinformatics analysis of HLA-A2 restricted neoantigen epitopes in breast cancer
YOU Zicong ; ZHON Weijun ; LUO Yunfeng ; DENG Jianwen ; ZHANG Pusheng ; FENG Haizhan ; WENG Junyan ; YU Jinlong ; ZHU Huijuan ; LI Yuhuab ; SHI Fujuna
Chinese Journal of Cancer Biotherapy 2020;27(4):427-432
[Abstract] Objective: To screen candidate epitopes of breast cancer HLA-A2 restrictive neoantigen and to identify high frequency mutation sites in breast cancer neoantigen by using bioinformatics method. Methods: NCBI and GDC databases were used to search missense mutation sites formed by single nucleotide mutation in breast cancer among reported literatures and sequencing data. The new antigen epitopes were predicted by HLA-A2 antigen epitope prediction website BIMAS, SYFPEITHI and artificial neural networkbased NetMHC4.0, and the epitopes with TAP binding power less than Intermediate were eliminated. The candidate epitopes were prioritized by mutation frequency and prediction results. Results: A total of 17 high-frequency mutation genes, including BTLA, ERBB2 and NBPF12 etc, were screened by the above-mentioned methods, and a total of 26 neoantigen epitopes were identified. The binding power of epitopes predicted using BIMAS and SYFPEITHI showed great difference (P<0.05), epitopes in high priority as GSTP1 (A114V , mutation frequency of 5.94%) and BRCA2 (N991H, mutation frequency of 5.40%) etc, were expected to be candidate neo-antigen epitopes; however, their mutation frequency was relatively too low to achieve“universal use” . The possibility of these epitopes used as general breast cancer neo-antigen epitopes is less likely. Conclusion: The common mutation frequency of breast cancer is lower than that of other tumors; it ’s difficult to find“universal”new antigen epitopes of breast cancer; the individualized neoantigen vaccine may be of more promise, which needs further research.
6.Content Determination of Related Substances in Terlipressin for Injection by UPLC
Qiaoru XUE ; Jinye YUAN ; Liuyang DING ; Weijun ZHENG ; Feng DENG
China Pharmacy 2020;31(9):1108-1112
OBJECTIVE:To establish UPLC method for the content determination of related substances in Terlipressin for injection. METHODS :UPLC method was used to determine the contents of related substances in 5 batches of Terlipressin for injection. The separation was performed on Xtimate UPLC C 18 column with mobile phase A consisted of ammonium sulfate buffer (pH 2.3)-methanol(90 ∶ 10,V/V)and mobile phase B consisted of ammonium sulfate buffer (pH 2.3)-methanol(60 ∶ 40,V/V) (gradient elution )at the flow rate of 0.2 mL/min. The detection wavelength was set at 210 nm,and sample size was 5 μL. RESULTS:The linear range of impurity A ,B,C,D,F,H,I,K,L and N were 0.43-3.86,0.44-3.95,0.44-3.97,0.45-4.08, 0.45-4.05,0.50-4.50,0.47-4.26,0.47-4.23,0.46-4.13,0.44-3.96 μg/mL(r≥0.999 7),respectively. The detection limits were 0.04, 0.04,0.05,0.04,0.05,0.05,0.05,0.05,0.04 μg/mL. The quantitation limits were 0.13,0.13,0.14,0.13,0.15,0.14,0.14, 0.14,0.13 μg/mL,respectively. RSDs of precision ,reproducibility and stability tests were all lower than 8%. The average recoveries were 94.95%,97.81%,101.88%,95.26%,93.40%,102.48%,104.26%,102.31%,96.42%,90.42%,with RSD s of 1.89%,1.86%,0.68%,1.30%,1.98%,3.36%,1.26%,1.30%,1.19%,1.40%(n=9),respectively. Total contents of impurities in 5 batches of Terlipressin for injection were all lower than 4%. CONCLUSIONS :Established method is rapid ,simple, accurate and specific ,which can be used for the quantitative analysis for related substances in Terlipressin for injection.
7.Comparison of continuous bed motion and step-and-shoot acquisition modes in 18F-FDG PET/CT imaging
Kemin HUANG ; Yanlin FENG ; Weitang LIANG ; Lin LI ; Dalang DENG ; Ming YANG ; Weijun XIAN
Chinese Journal of Nuclear Medicine and Molecular Imaging 2019;39(3):157-160
Objective To investigate the differences of acquisition protocols from continuous bed motion (CBM) and step-and-shoot (SS) modes and to observe their effects on image quality and standard uptake value (SUV) in 18 F-fluorodeoxyglucose (FDG) PET/CT.Methods A total of 30 patients (13 males,17 females;40-71 years) who underwent 18F-FDG PET/CT from June 2017 to September 2017 were selected.Simulated acquisition protocols for a specific range (upper margin of the skull to the lower edge of sciatic bone) were established with CBM and SS modes.The differences between 2 modes for actual length requiring for a specific acquisition range and the differences in CT radiation dose were compared.Real PET/ CT scans were performed using CBM and SS modes consecutively,and the differences in image quality and SUV were compared.Paired t test andx2 test were used to analyze the data.Results For the specific acquisition range,the average acquisition length of CBM was reduced by 6.65% ((87.11 ± 3.78) vs (93.32 ±6.02) cm;t=-7.737,P<0.001) and the CT radiation dose was reduced by 6.88% ((812±170) vs (872±192) mGy · cm;t=-6.432,P<0.001) for each patient compared with the results of SS.There were no significant differences in maximum SUV (SUVmax) and mean SUV (SUVmean) between SS and CBM in normal tissues including liver,bone and waist muscles (t values:from-1.895 to 0.132,all P>0.05).The SUVmax of leg muscles at the end of the image was significantly higher in SS than that in CBM (1.24±0.53 vs 1.06±0.42;t=3.450,P<0.01).There were no statistically significant differences in SUVmax and SUV between SS and CBM in 40 FDG high uptake lesions (t values:0.420 and-0.260,both P>0.05).There were 73.33% (22/30) patients had images with overall high quality during SS and the percentage was 80.00% (24/30) during CBM (x2 =0.373,P>0.05).The percentage of patients with images of high quality at the end was 16.67%(5/30) during SS,which was significantly less than that during CBM (63.33%,19/30;x2 =13.611,P<0.001).Conclusions For the specific acquisition range,CBM can reduce unnecessary CT scan range and radiation dose compared with SS.There is no significant difference in image quality and SUV from normal tissue and lesion except for the end of the image.
8.Role and mechanism of microRNA-92b-3p in esophageal squamous cell carcinoma analyzed by weighted gene co-expression network analysis
Wanpeng WANG ; Chenghong FU ; Qidi ZHANG ; Chengshi WANG ; Zhongxiang HE ; Yun GU ; Yanyan ZHANG ; Weijun DENG ; Juan PU
Chinese Journal of Digestion 2019;39(6):390-396
Objective To screen the critical genes related to the development of esophageal squamous cell carcinoma ( ESCC ) by weighted gene co-expression network analysis ( WGCNA ) and to verify by experiments.Methods Gene expression data of ESCC were downloaded from gene expression omnibus (GEO) database based on gene chip platform ( GPL) 570, GPL571, GPL96/97 or GPL14613 platform, respectively. Meanwhile, the obtained differentially expressed genes together with gene expression data of 81 ESCC patients from the cancer genome atlas ( TCGA ) and clinical data were analyzed by WGCNA to set up co-expression networks including mRNA and microRNA ( miRNA ) . The expression of miRNA in ESCC tissues and paracancerous tissues was examined by quantitative real-time polymerase chain reaction ( RT-PCR ) .And the expression of target protein Kruppel like factor 4 ( KLF4 ) and desmocollin 2 ( DSC2 ) were detected by immunohistochemistry .After ESCC cell line ECA-109 cells were transfected with miRNA-92b-3p mimic, cell cycle was tested by flow cytometry ,the cell invasion and migration ability was measured by Transwell chamber assay and scratch-wound assay.The expression of KLF4 and DSC2 was observed by confocal laser scanning microscopy and Western blotting .The target genes were verified by luciferase assay .T-test, rank sum test, chi-square test and Pearson correlation analysis were performed for statistical analysis .Results A total of 4023 differential expression gene ( DEG) and 328 differential expression miRNA ( DEM) were screened and 11 gene modules were set up by WGCNA .Among them, the brown modules were negatively associated with tumor grade and T stage (r=-0.340 and -0.268, P=0.002 and 0.016).Meanwhile, has-miR-92b and the potential target genes KLF4 and DSC2 were all in the brown module .Furthermore, the results of RT-PCR showed the expression of miRNA-92b-3p in ESCC tissues was higher than that in paracancerous tissues (3.052(1.652, 5.371) vs.0.985(0.558, 2.032)), and the difference was statistically significant (Z=-4.021,P<0.01). The results of immunohistochemistry demonstrated that the positive rates of KLF 4 and DSC2 in ESCC tissues were 43.3%(13/30) and 20.0%(6/30), respectively, which were lower than those of paracancerous tissues (70.0%(21/30) and 63.3%(19/30)), and the differences were statistically significant (χ2 =4.344 and 1.589, both P<0.05).After ECA-109 cells were transfected with miRNA-92b-3p mimics, the percentage of cells at G0/G1 phase decreased ((63.71 ±2.83)%vs.(54.62 ±4.00)%) and the percentage of cells at the S phase and G2/M phase increased ((31.81 ±2.88)%vs.(41.20%±2.87)%, and (3.87 ±1.75)%vs. (8.10 ±1.71)%, respectively), and the differences were statistically significant (t =3.215, 4.000 and 2.998;P=0.032, 0.016 and 0.040).The invasion and migration ability of the cells were significantly improved (79.67 ±27.54 vs.280.33 ±46.18, (69.72 ±3.91)% vs.(84.90 ±5.25)%), and the differences were statistically significant (t=6.465 and 4.019, P=0.003 and 0.016).The results of Western blotting indicated that, compared with control mimic group , the expression of KLF4 and DSC2 was both dramatically downregulated after transfected with miRNA-92b-3p mimics transfected (1.00 ±0.23 vs.0.42 ±0.03, 1.00 ±0.20 vs.0.55 ± 0.21), and differences were statistically significant (t=4.470 and 5.493, P=0.042 and 0.032).The results of luciferase assay demonstrated that miRNA-92b-3p could directly bind KLF4 and DSC2. Conclusion WGCNA is an efficient systemic biological approach by which miRNA-92b-3p is identified as a new cancer-promoting gene .
9.Simultaneous determination of protocatechuic acid, salidroside, and chlorogenic acid in sargentodoxa cuneata by HPLC
Yuting HOU ; Weijun GU ; Bei XIANG ; Huijie PAN ; Yan SONG ; Daming DENG ; Ruxian DING
International Journal of Traditional Chinese Medicine 2017;39(6):535-538
Objective To establish a method for the determination of protocatechuic acid, salidroside, and chlorogenic acid in Sargentodoxa cuneata. Methods The separation was performed on a Waters XSELECT CSH C18 (150 mm × 4.6 mm, 5 μm) with methanol-acetonitrile-0.2 % phosphoric acid as the mobile phase in a gradient elution at a flow rate of 0.8 ml/min. The detection wavelength was 260 nm and the column temperature was 35 ℃. Results The linear ranges of protocatechuic acid, salidroside, and chlorogenic acid were 0.0020-0.0120, 0.0600-0.3602, 0.0750-4.5006 mg/ml, respectively. The average recoveries were 98.01% (RSD=0.07%), 98.53 % (RSD=0.12%), and 101.10 % (RSD=1.92%), respectively. Conclusions The method is simple, accurate, and highly reproducible, which could provide the scientific evidence for the quality control of Sargentodoxa cuneata.
10.Establishing a predictive model for aspirin resistance in aging male with coronary heart disease
Weijun HAO ; Jian CAO ; Linggen GAO ; Jianhua LI ; Xinli DENG ; Yufa SUN ; Li FAN
Chinese Journal of Geriatrics 2016;35(4):365-370
Objective To quantify the risk factors for aspirin resistance so as to increase the prognosis for risk of coronary heart disease,and to establish a predictive model for aspirin resistance in order to guide the clinical anti-platelet therapy.Methods A total of 938 elderly male patients with stable coronary heart disease (CHD) receiving oral aspirin therapy (>75 mg/d) over 2 months were included in this study.Their clinical data were collected.Logistic regression analysis was performed to establish a predictive model and risk score for aspirin resistance.Hosmer Lemeshow (H-L) test and an area under the receiver operating characteristic (ROC) curve (the area under the ROC curve) were performed to test the calibration and discrimination of the model.Results Seven risk factors were included in the predictive model,including serum creatinine (>110 μmol/L:score of 1),fasting blood glucose (>7.0 mmol/L:score of 1),hyperlipidemia (score of 1),number of coronary arteries in lesion (2 branches:score of 2,≥≥3 branches:score of 4),body mass index[(20-25) kg/m2:score of 2,>25 kg/m2:score of 4],percutaneous coronary intervention (score of 2),smoking (score of 3).H-L test showed P≥0.05 and the area under the ROC curve>0.70 in this model.Conclusions the risk factors for aspirin resistance,and establishing a valid predictive model for aspirin resistance,could provide an important reference for anti-platelet therapy in CHD patients.

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