1. Virtual monochromatic images in low tube current dual-energy spectral imaging combined with adaptive statistical iterative reconstruction V in head CT angiography:phantom and clinical study
Tingni SONG ; Zhenlin LI ; Lihong ZHAO ; Wanjiang LI ; Lei LI ; Fei ZHAO ; Yuming LI ; Chunchao XIA
Chinese Journal of Radiology 2019;53(11):998-1004
Objective:
To analyze the value of combining the virtual monochromatic spectral (VMS) image and adaptive statistical iterative reconstruction V (ASiR-V) in low tube current dual-energy spectral imaging in head CTA, and to explore the optimal VMS and ASiR-V level while reducing the radiation dose.
Method:
(1) Phantom study: an Anthropomorphic PBU-60 angiographic head phantom was examined on a Revolution CT with spectral imaging mode at two different tube current. Images of different energy levels (at 40, 45, 50, 55, 60, 65 and 70 keV) in A group [the low tube current group (with 280 mA)] were reconstructed with the combination of filtered back projection (FBP), 20%, 40%, 60% and 80% ASiR-V. VMS images at 70 keV in B group [the routine tube current group (with 445 mA)] were reconstructed with FBP only. The standard deviation (SD), signal to noise ratio (SNR) and contrast to noise ratio (CNR) of phantom study were measured and examined by ANOVA variance analysis.(2) Clinical study: to prospectively select 40 patients (randomly divided into A and B groups with 20 patients in each group), the subjective scores of patients were assessed with a 5-point scale system and compared by the Mann-Whitney
2.Antisense transcription regulates the expression of sense gene via alternative polyadenylation.
Ting SHEN ; Huan LI ; Yifan SONG ; Jun YAO ; Miao HAN ; Ming YU ; Gang WEI ; Ting NI
Protein & Cell 2018;9(6):540-552
Natural antisense transcripts (NAT) and alternative polyadenylation (APA) of messenger RNA (mRNA) are important contributors of transcriptome complexity, each playing a critical role in multiple biological processes. However, whether they have crosstalk and function collaboratively is unclear. We discovered that APA enriched in human sense-antisense (S-AS) gene pairs, and finally focused on RNASEH2C-KAT5 S-AS pair for further study. In cis but not in trans over-expression of the antisense KAT5 gene promoted the usage of distal polyA (pA) site in sense gene RNASEH2C, which generated longer 3' untranslated region (3'UTR) and produced less protein, accompanying with slowed cell growth. Mechanistically, elevated Pol II occupancy coupled with SRSF3 could explain the higher usage of distal pA site. Finally, NAT-mediated downregulation of sense gene's protein level in RNASEH2C-KAT5 pair was specific for human rather than mouse, which lacks the distal pA site of RNASEH2C. We provided the first evidence to support that certain gene affected phenotype may not by the protein of its own, but by affecting the expression of its overlapped gene through APA, implying an unexpected view for understanding the link between genotype and phenotype.
Cell Proliferation
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genetics
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Evolution, Molecular
;
Gene Expression Regulation
;
genetics
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HEK293 Cells
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Humans
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Polyadenylation
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genetics
;
RNA, Antisense
;
genetics
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RNA, Messenger
;
genetics
;
Ribonuclease H
;
genetics
;
Serine-Arginine Splicing Factors
;
metabolism
;
Transcription, Genetic
;
Up-Regulation
;
genetics

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