1.Computational pathology in precision oncology: Evolution from task-specific models to foundation models.
Yuhao WANG ; Yunjie GU ; Xueyuan ZHANG ; Baizhi WANG ; Rundong WANG ; Xiaolong LI ; Yudong LIU ; Fengmei QU ; Fei REN ; Rui YAN ; S Kevin ZHOU
Chinese Medical Journal 2025;138(22):2868-2878
With the rapid development of artificial intelligence, computational pathology has been seamlessly integrated into the entire clinical workflow, which encompasses diagnosis, treatment, prognosis, and biomarker discovery. This integration has significantly enhanced clinical accuracy and efficiency while reducing the workload for clinicians. Traditionally, research in this field has depended on the collection and labeling of large datasets for specific tasks, followed by the development of task-specific computational pathology models. However, this approach is labor intensive and does not scale efficiently for open-set identification or rare diseases. Given the diversity of clinical tasks, training individual models from scratch to address the whole spectrum of clinical tasks in the pathology workflow is impractical, which highlights the urgent need to transition from task-specific models to foundation models (FMs). In recent years, pathological FMs have proliferated. These FMs can be classified into three categories, namely, pathology image FMs, pathology image-text FMs, and pathology image-gene FMs, each of which results in distinct functionalities and application scenarios. This review provides an overview of the latest research advancements in pathological FMs, with a particular emphasis on their applications in oncology. The key challenges and opportunities presented by pathological FMs in precision oncology are also explored.
Humans
;
Precision Medicine/methods*
;
Medical Oncology/methods*
;
Artificial Intelligence
;
Neoplasms/pathology*
;
Computational Biology/methods*
2.Safety evaluation of food and drug packaging pigments
Ruomeng YANG ; Lifang WANG ; Wei DU ; Shouqian JIA ; Rundong FENG
Adverse Drug Reactions Journal 2025;27(8):486-494
Objective:To analyze the safety of pigments and inks commonly used in food and drug packaging materials.Methods:The acute oral toxicity, skin irritation, and eye irritation tests in 4 different batches of pigment samples (YP-001 to YP-008) and one kind of ink (YP-009) were investigated by animal experiments. Median lethal dose (LD 50), body weight, and stimulation intensity were used as detection indicators. The test sample with LD 50>5 000 mg/kg was judged as practically non-toxicity, the test sample with skin irritation intensity of 0-<0.50 points and eye irritation intensity of 0-3 points were judged as no irritation. Bacterial reverse mutation test, in vitro mammalian chromosome aberration test, and mammalian erythrocyte micronucleus test were carried out on oil paint (YP-007). The number of revertant colonies, chromosome aberration rate, and erythrocyte micronucleus rate were used as the detection indexes. If the number of revertant colonies in each dose group in the test sample was less than 2 times of that in the blank control group, the chromosome aberration rate and erythrocyte micronucleus rate were not statistically significant compared with the negative control group, the test sample was judged to be negative. Results:The acute oral toxicity test showed that the weight of mice in different test groups was not reduced, and the LD 50 was more than 5 000 mg/kg, so the samples were judged to be practically non-toxic, no irritation to skin and eyes of rabbits. The bacterial reverse mutation test showed that the results in 5 different dose groups and 5 repeated dose groups of oil paint test samples were all negative. The in vitro mammalian chromosome aberration test showed that the results in 3 dose groups of oil paint test samples (5.0, 2.5 and 1.25 mg/ml) were all negative. The mammalian erythrocyte micronucleus test showed that the results in 3 dose groups of oil paint test samples (10.0, 5.0 and 2.5 mg/kg) were all negative. Conclusions:The test samples of 4 different batches of pigments and one kind of ink are practically non-toxic and free of skin and eye irritation. The oil paint (YP-007) has no genotoxicity and potential carcinogenicity in vivo and in vitro.
3.Comparative efficacy of O-arm navigation-assisted and conventional posterior cervical expansive open-door laminoplasty via the intermuscular approach in the treatment of cervical spinal cord injury without fracture-dislocation
Zhe SHAO ; Wentao JIANG ; Kai SU ; Rundong GUO ; Long WANG ; Yili LI ; Xiaoteng LI ; Qiangqiang PAN ; Wei MEI ; Qingde WANG
Chinese Journal of Trauma 2025;41(3):259-266
Objective:To compare the efficacy of O-arm navigation-assisted and conventional posterior cervical expansive open-door laminoplasty (CEOL) via the intermuscular approach in the treatment of cervical spinal cord injury without fracture-dislocation (CSCIWFD).Methods:A prospective cohort study was conducted to analyze the clinical data of 60 CSCIWFD patients who were admitted to Zhengzhou Orthopedic Hospital from May 2021 to May 2023, with compression at C3-C6. Patients were randomly divided into two groups: 30 patients underwent O-arm navigation-assisted intermuscular approach CEOL (navigation-assisted group) and 30 patients underwent conventional intermuscular approach CEOL (conventional surgery group). Surgical duration, intraoperative blood loss, postoperative drainage volume, and total surgical blood loss were compared between the two groups. At 2 weeks postoperatively, CT scan was performed to evaluate the accuracy of hinge or open-door position preparation of the surgical segments. Visual analogue scale (VAS) for neck and shoulder pain and Japanese Orthopedic Association (JOA) scores were compared between the two groups preoperatively, at 2 weeks, 6 months postoperatively, and at the last follow-up. Complication rates were also evaluated.Results:A total of 60 patients with CSCIWFD were included, comprising 35 males and 25 females, aged 35-77 years [(50.9±8.6)years]. All the patients were followed up for 12-24 months [(16.9±3.1)months]. The surgical duration and intraoperative blood loss were (121.6±17.9)minutes and (144.7±44.2)ml in the navigation-assisted group, shorter or less than (132.3±14.6)minutes and (178.7±48.7)ml in the conventional surgery group ( P<0.05). There were no statistically significant differences in postoperative drainage volume and total surgical blood loss between the two groups ( P>0.05). CT scan reviewed at 2 weeks postoperatively revealed that the accuracy rate of hinge and open-door position preparation of the surgical segments in the navigation-assisted group was 99.2% (119/120), significantly higher than 86.7% (104/120) in the conventional surgery group ( P<0.01). Before operation and at 2 weeks, 6 months postoperatively, and at the last follow-up, the VAS scores for neck and shoulder pain and JOA scores in the navigation-assisted group were 5.0(4.0, 7.0)points and (8.7±2.8)points, 3.0(2.0, 4.0)points and (10.2±2.5)points, 2.0(1.0, 2.0)points and (1 3.0±1.8)points, and 1.0(1.0, 2.0)points and (13.9±1.5)points respectively, while in the conventional surgery group, the VAS scores and JOA scores were 5.5(5.0, 6.3)points and (8.8±2.6)points, 4.0(3.0, 4.0)points and (10.4±2.5)points, 2.0(1.0, 3.0)points and (12.9±2.2)points, and 2.0(1.0, 2.0)points and (13.8±2.0)points ( P>0.05). Both groups showed improvement in neck and shoulder VAS scores and JOA scores at 2 weeks, 6 months postoperatively, and at the last follow-up, compared to preoperative scores ( P<0.05); further improvement was observed at 6 months postoperatively and at the last follow-up compared to that at 2 weeks postoperatively ( P<0.05). There were no significant differences between neck and shoulder VAS scores or JOA scores at 6 months postoperatively and at the last follow-up ( P>0.05). In the navigation-assisted group, 2 patients had axial neck-shoulder pain postoperatively, with a complication rate of 7% (2/30); while in the conventional surgery group, 7 patients had axial neck-shoulder pain and one patient developed cerebrospinal fluid leakage and low-pressure headache, with a complication rate of 27% (8/30) ( P<0.05). Conclusion:Compared to the conventional intermuscular approach, O-arm navigation-assisted intermuscular approach CEOL for CSCIWFD reduces surgical duration and intraoperative blood loss, improves the accuracy of hinge and open-door position preparation, and lowers complication rates.
4.Comparative efficacy of O-arm navigation-assisted and conventional posterior cervical expansive open-door laminoplasty via the intermuscular approach in the treatment of cervical spinal cord injury without fracture-dislocation
Zhe SHAO ; Wentao JIANG ; Kai SU ; Rundong GUO ; Long WANG ; Yili LI ; Xiaoteng LI ; Qiangqiang PAN ; Wei MEI ; Qingde WANG
Chinese Journal of Trauma 2025;41(3):259-266
Objective:To compare the efficacy of O-arm navigation-assisted and conventional posterior cervical expansive open-door laminoplasty (CEOL) via the intermuscular approach in the treatment of cervical spinal cord injury without fracture-dislocation (CSCIWFD).Methods:A prospective cohort study was conducted to analyze the clinical data of 60 CSCIWFD patients who were admitted to Zhengzhou Orthopedic Hospital from May 2021 to May 2023, with compression at C3-C6. Patients were randomly divided into two groups: 30 patients underwent O-arm navigation-assisted intermuscular approach CEOL (navigation-assisted group) and 30 patients underwent conventional intermuscular approach CEOL (conventional surgery group). Surgical duration, intraoperative blood loss, postoperative drainage volume, and total surgical blood loss were compared between the two groups. At 2 weeks postoperatively, CT scan was performed to evaluate the accuracy of hinge or open-door position preparation of the surgical segments. Visual analogue scale (VAS) for neck and shoulder pain and Japanese Orthopedic Association (JOA) scores were compared between the two groups preoperatively, at 2 weeks, 6 months postoperatively, and at the last follow-up. Complication rates were also evaluated.Results:A total of 60 patients with CSCIWFD were included, comprising 35 males and 25 females, aged 35-77 years [(50.9±8.6)years]. All the patients were followed up for 12-24 months [(16.9±3.1)months]. The surgical duration and intraoperative blood loss were (121.6±17.9)minutes and (144.7±44.2)ml in the navigation-assisted group, shorter or less than (132.3±14.6)minutes and (178.7±48.7)ml in the conventional surgery group ( P<0.05). There were no statistically significant differences in postoperative drainage volume and total surgical blood loss between the two groups ( P>0.05). CT scan reviewed at 2 weeks postoperatively revealed that the accuracy rate of hinge and open-door position preparation of the surgical segments in the navigation-assisted group was 99.2% (119/120), significantly higher than 86.7% (104/120) in the conventional surgery group ( P<0.01). Before operation and at 2 weeks, 6 months postoperatively, and at the last follow-up, the VAS scores for neck and shoulder pain and JOA scores in the navigation-assisted group were 5.0(4.0, 7.0)points and (8.7±2.8)points, 3.0(2.0, 4.0)points and (10.2±2.5)points, 2.0(1.0, 2.0)points and (1 3.0±1.8)points, and 1.0(1.0, 2.0)points and (13.9±1.5)points respectively, while in the conventional surgery group, the VAS scores and JOA scores were 5.5(5.0, 6.3)points and (8.8±2.6)points, 4.0(3.0, 4.0)points and (10.4±2.5)points, 2.0(1.0, 3.0)points and (12.9±2.2)points, and 2.0(1.0, 2.0)points and (13.8±2.0)points ( P>0.05). Both groups showed improvement in neck and shoulder VAS scores and JOA scores at 2 weeks, 6 months postoperatively, and at the last follow-up, compared to preoperative scores ( P<0.05); further improvement was observed at 6 months postoperatively and at the last follow-up compared to that at 2 weeks postoperatively ( P<0.05). There were no significant differences between neck and shoulder VAS scores or JOA scores at 6 months postoperatively and at the last follow-up ( P>0.05). In the navigation-assisted group, 2 patients had axial neck-shoulder pain postoperatively, with a complication rate of 7% (2/30); while in the conventional surgery group, 7 patients had axial neck-shoulder pain and one patient developed cerebrospinal fluid leakage and low-pressure headache, with a complication rate of 27% (8/30) ( P<0.05). Conclusion:Compared to the conventional intermuscular approach, O-arm navigation-assisted intermuscular approach CEOL for CSCIWFD reduces surgical duration and intraoperative blood loss, improves the accuracy of hinge and open-door position preparation, and lowers complication rates.
5.Safety evaluation of food and drug packaging pigments
Ruomeng YANG ; Lifang WANG ; Wei DU ; Shouqian JIA ; Rundong FENG
Adverse Drug Reactions Journal 2025;27(8):486-494
Objective:To analyze the safety of pigments and inks commonly used in food and drug packaging materials.Methods:The acute oral toxicity, skin irritation, and eye irritation tests in 4 different batches of pigment samples (YP-001 to YP-008) and one kind of ink (YP-009) were investigated by animal experiments. Median lethal dose (LD 50), body weight, and stimulation intensity were used as detection indicators. The test sample with LD 50>5 000 mg/kg was judged as practically non-toxicity, the test sample with skin irritation intensity of 0-<0.50 points and eye irritation intensity of 0-3 points were judged as no irritation. Bacterial reverse mutation test, in vitro mammalian chromosome aberration test, and mammalian erythrocyte micronucleus test were carried out on oil paint (YP-007). The number of revertant colonies, chromosome aberration rate, and erythrocyte micronucleus rate were used as the detection indexes. If the number of revertant colonies in each dose group in the test sample was less than 2 times of that in the blank control group, the chromosome aberration rate and erythrocyte micronucleus rate were not statistically significant compared with the negative control group, the test sample was judged to be negative. Results:The acute oral toxicity test showed that the weight of mice in different test groups was not reduced, and the LD 50 was more than 5 000 mg/kg, so the samples were judged to be practically non-toxic, no irritation to skin and eyes of rabbits. The bacterial reverse mutation test showed that the results in 5 different dose groups and 5 repeated dose groups of oil paint test samples were all negative. The in vitro mammalian chromosome aberration test showed that the results in 3 dose groups of oil paint test samples (5.0, 2.5 and 1.25 mg/ml) were all negative. The mammalian erythrocyte micronucleus test showed that the results in 3 dose groups of oil paint test samples (10.0, 5.0 and 2.5 mg/kg) were all negative. Conclusions:The test samples of 4 different batches of pigments and one kind of ink are practically non-toxic and free of skin and eye irritation. The oil paint (YP-007) has no genotoxicity and potential carcinogenicity in vivo and in vitro.
6.Parameter estimation using time-dependent Weibull proportional hazards model for survival analysis with partly interval censored data.
Shuying WANG ; Xinyu LIU ; Rundong LI ; Yang LI
Journal of Southern Medical University 2024;44(12):2461-2468
OBJECTIVE: To assess the validity and effectiveness of parameter estimation using a time-dependent Weibull proportional hazards model for survival analysis containing partly interval censored data and explore the impact of different covariates on the results of analysis. METHODS: We established a time-dependent Weibull proportional hazards model using the Weibull distribution as the baseline hazard function of the model which incorporated time-varying covariates. Maximum likelihood estimation was employed to estimate the model parameters, which were obtained by optimization of the likelihood function. RESULTS AND CONCLUSION: Numerical simulation results showed that with higher proportions of precise observations across different sample sizes and parameter settings, the proposed model resulted in improved accuracy of parameter estimation with coverage probabilities approximating the theoretical expectation of 95%. As the sample sizes increased, the parameter biases of the model tended to decrease. Experiments with empirical data further validated the effectiveness of the model. Compared with the failure time data for each precisely observed individual, additional interval-censored data helped to obtain more effective estimates of the regression parameters. Comparison with the Cox model that included time-varying covariates further demonstrated the effectiveness of the time-dependent Weibull proportional hazards model for parameter estimation in survival analysis with partly interval censored data.
Proportional Hazards Models
;
Survival Analysis
;
Likelihood Functions
;
Humans
;
Computer Simulation
;
Time Factors
7.Progress of perioperative analgesia in abdominal surgery
Chinese Journal of General Surgery 2024;39(11):822-826
Enhanced recovery after surgery (ERAS) is a concept based on evidence-based medicine, with the reduction of patients' physiological and psychological stress as the core, multiple optimized perioperative paths as specific measures, and the ultimate goal of rapid rehabilitation. In the field of abdominal surgery, perioperative analgesia is a key factor affecting the rapid recovery of patients after surgery and an important link in accelerating the rehabilitation of ERAS program. With the development of modern medical technology and clinical research, breakthroughs have been made in the development of new analgesic drugs, and analgesic techniques and programs have been improved day by day. Preventive, multimodal and individualized analgesic regiments are currently recommended. We reviewed the current application status of analgesics and pain management techniques in the field of abdominal surgery. Combined with the pain management experience of our center, the research progress and existing problems in preventive, multi-modal and individualized analgesia are discussed.
8.Efficacy of stage I modified posterior vertebral column resection in the treatment of postoperative infection after percutaneous vertebroplasty for osteoporotic vertebral compression fracture
Zhe SHAO ; Qingde WANG ; Rundong GUO ; Zhenhui ZHANG ; Kai SU ; Wentao JIANG ; Peilin LIU ; Yongsheng KANG ; Wei MEI
Chinese Journal of Trauma 2024;40(3):214-220
Objective:To explore the efficacy of stage I modified posterior vertebral column resection (mPVCR) in the treatment of postoperative infection after percutaneous vertebroplasty (PVP) for osteoporotic vertebral compression fracture (OVCF).Methods:A retrospective case series study was conducted to analyze the clinical data of 11 OVCF patients with post-PVP infection who were admitted to Zhengzhou Orthopedics Hospital from January 2016 to June 2022, including 4 males and 7 females, aged 61-81 years [(70.2±6.4)years]. Injured segments included T 9 in 1 patient, T 11 in 2, T 12 in 3, L 1 in 1, L 2 in 2, T 11-T 12 in 1, and T 12-L 1 in 1. American Spinal Injury Association (ASIA) grading was grade D in 5 patients and grade E in 6. All the patients were treated with stage I mPVCR. The operation time and intraoperative bleeding volume were recorded. The values of Visual Analogue Scale (VAS), Oswestry Dysfunction Index (ODI), and Cobb angle of the lesion segments before, at 2 weeks, 3 months after surgery, and at the last follow-up were compared. The loss of Cobb angle of the lesion segments at 2 weeks after surgery and at the last follow-up were compared, and the ASIA grading at the last follow-up was recorded. The infection control, bone healing, and the incidence of complications were observed at the last follow-up. Results:All the patients were followed up for 12-44 months [(26.0±9.4)months]. The operation time and intraoperative bleeding volume were 230-330 minutes [(279.2±28.6)minutes] and 500-1 100 ml [(840.9±184.1)ml] respectively. At 2 weeks, 3 months after surgery and at the last follow-up, the VAS scores were (4.0±0.8)points, (2.7±0.9)points, and (2.4±0.7)points respectively, which were all lower than that before surgery [(8.1±1.2)points] ( P<0.01); the ODI was (45.5±5.1)%, (30.0±6.5)%, and (18.5±3.6)% respectively, which were all lower than that before surgery [(78.7±6.2)%] ( P<0.01); the Cobb angle of the lesion segments were (7.9±1.4)°, (8.5±1.4)°, and (9.2±1.5)° respectively, which were lower than that before surgery [(25.5±9.2)°] ( P<0.01). The VAS and ODI were both improved at 3 months after surgery compared with those at 2 weeks after surgery ( P<0.05), while there was no significant difference in Cobb angle of the lesion segments ( P>0.05). The ODI was further improved at the last follow-up compared with that at 3 months after surgery ( P<0.05), while there were no significant differences in VAS or Cobb angle of the lesion segments ( P>0.05). The loss of Cobb angle correction of the lesion segment at the last follow-up was 0.96 (0.69, 1.45)° compared with that at 2 weeks after surgery and the rate of loss of Cobb angle correction of the lesion segment was 4.4(2.2, 7.4)%. At the last follow-up, the ASIA grading was grade E for all the patients, who were able to walk normally independently. The infection was all cured and good bony fusion was observed in the operated area at the last follow-up. Two patients had pleural effusion and pulmonary atelectasis, 1 incision fat liquefaction, and 1 pneumonia after the surgery. None of the patients had internal fixation failure and serious complications such as worsening neurological symptoms or death. Conclusion:Stage I mPVCR for the treatment of post-PVP infection in patients with OVCF is proved to attain significant pain relief and functional improvement, good correction results, effective reconstruction of spinal stability, complete removal of infected lesions, and few serious complications.
9.One-stage posterior-anterior combined operation for treatment of abnormal fusion after facet joint dislocation in subaxial cervical spine
Yongsheng KANG ; Peilin LIU ; Kai SU ; Qingde WANG ; Rundong GUO ; Wentao JIANG ; Zhenhui ZHANG ; Zhe SHAO ; Wei MEI
Chinese Journal of Orthopaedic Trauma 2024;26(1):85-88
Objective:To investigate the efficacy of one-stage posterior-anterior combined operation for the treatment of abnormal fusion after facet joint dislocation in the subaxial cervical spine.Methods:A retrospective study of case series was conducted to analyze the clinical data of 10 patients with abnormal fusion after facet joint dislocation in the subaxial cervical spine who had been admitted to Department of Spine Surgery, Zhengzhou Orthopedic Hospital from January 2015 to May 2023. There were 7 males and 3 females with an age of (41.2±3.1) years. Preoperative American Spinal Injury Association (ASIA) grading: 5 cases of grade A, 4 cases of grade B, and 1 cases of grade C. All the patients were treated with one-stage posterior-anterior combined operation. The surgical time and intraoperative bleeding volume were recorded. The ASIA grading was used to evaluate the improvements in nerve function of the spinal cord 3 months after surgery. The VAS scores, cervical intervertebral heights, and Cobb angles were compared between pre-surgery, 3 months after surgery, and the last follow-up. The fusion of intervertebral bone graft was evaluated 3 months after surgery using the Bridgell intervertebral fusion criteria. Complications were observed.Results:All patients were followed up for 15.5 (13.8, 20.5) months. The surgical time was (119.5±3.6) minutes, and the intraoperative bleeding volume (141.6±25.6) mL. Significant improvements in VAS score, cervical intervertebral height, and Cobb angle were observed at 3 months after surgery and the last follow-up compared with the pre-surgery values ( P<0.05), but there was no statistically significant difference between 3 months after surgery and the last follow-up ( P>0.05). ASIA grading 3 months after surgery: 4 cases of grade A, 4 cases of grade B, and 2 cases of grade C. By the Bridgell intervertebral fusion criteria at 3 months after surgery: 9 cases of grade Ⅰ and 1 cases of grade Ⅱ, showing good intervertebral fusion. Surgery went on well for all patients, showing no postoperative complications such as aggravation of nerve lesion or vascular injury. Conclusion:In the treatment of abnormal fusion after facet joint dislocation in the subaxial cervical spine, the efficacy of one-stage posterior-anterior combined operation is definite because it can effectively reduce pain, restore the height and physiological curvature of the cervical intervertebral space, and achieve good intervertebral fusion.
10.Virus spectrum and epidemic characteristics of hospitalized children with acute respiratory tract infections in Guilin area, 2021 to 2022
Renhe ZHU ; Hu LONG ; Rundong CAO ; Lulu WANG ; Juan SONG ; Qinqin SONG ; Guoyong MEI ; Zhiqiang XIA ; Jun HAN ; Chen GAO
Chinese Journal of Experimental and Clinical Virology 2024;38(1):43-48
Objective:To understand the composition of respiratory virus spectrum in hospitalized children with acute respiratory infections in Guilin City from 2021 to 2022, and to explore the epidemic characteristics of different respiratory viruses.Methods:Information of a total of 638 hospitalized children with acute respiratory infections (ARI) syndrome under the age of 14 years in Guilin city, Guangxi from September 2021 to October 2022 was collected as research data. The collected pharyngeal swabs from pediatric patients were subjected to real-time fluorescence reverse transcription polymerase chain reaction for nucleic acid testing, screening for 15 common respiratory viruses, and analyzing the virus spectrum characteristics of hospitalized pediatric patients with acute respiratory infections.Results:Among the 638 specimens, 365 were tested positive for at least one virus, with a positive rate of 57.21% (365/638). The detection rate for two or more viruses was 12.85% (82/638). There were 12 types of viruses detected, and the difference in virus detection rates among different seasons was statistically significant (P<0.002). The virus positive detection rate of samples from different age groups was the highest in the 0-2-year old group (40.66%), followed by the 3-5-year old group (34.80%) and the 6-year and older group (24.54%).Conclusions:During the period from September 2021 to October 2022, all 12 respiratory viruses were prevalent in Guilin area, with obvious summer peak as characteristics. It is suggested that corresponding prevention and control measures should be focused on pathogens that may cause acute respiratory infections in children during the local summer to prevent and control the spread and prevalence of respiratory infections.

Result Analysis
Print
Save
E-mail