1.Prediction of Pharmacoresistance in Drug-Naïve Temporal Lobe Epilepsy Using Ictal EEGs Based on Convolutional Neural Network.
Yiwei GONG ; Zheng ZHANG ; Yuanzhi YANG ; Shuo ZHANG ; Ruifeng ZHENG ; Xin LI ; Xiaoyun QIU ; Yang ZHENG ; Shuang WANG ; Wenyu LIU ; Fan FEI ; Heming CHENG ; Yi WANG ; Dong ZHOU ; Kejie HUANG ; Zhong CHEN ; Cenglin XU
Neuroscience Bulletin 2025;41(5):790-804
Approximately 30%-40% of epilepsy patients do not respond well to adequate anti-seizure medications (ASMs), a condition known as pharmacoresistant epilepsy. The management of pharmacoresistant epilepsy remains an intractable issue in the clinic. Its early prediction is important for prevention and diagnosis. However, it still lacks effective predictors and approaches. Here, a classical model of pharmacoresistant temporal lobe epilepsy (TLE) was established to screen pharmacoresistant and pharmaco-responsive individuals by applying phenytoin to amygdaloid-kindled rats. Ictal electroencephalograms (EEGs) recorded before phenytoin treatment were analyzed. Based on ictal EEGs from pharmacoresistant and pharmaco-responsive rats, a convolutional neural network predictive model was constructed to predict pharmacoresistance, and achieved 78% prediction accuracy. We further found the ictal EEGs from pharmacoresistant rats have a lower gamma-band power, which was verified in seizure EEGs from pharmacoresistant TLE patients. Prospectively, therapies targeting the subiculum in those predicted as "pharmacoresistant" individual rats significantly reduced the subsequent occurrence of pharmacoresistance. These results demonstrate a new methodology to predict whether TLE individuals become resistant to ASMs in a classic pharmacoresistant TLE model. This may be of translational importance for the precise management of pharmacoresistant TLE.
Epilepsy, Temporal Lobe/diagnosis*
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Animals
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Drug Resistant Epilepsy/drug therapy*
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Electroencephalography/methods*
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Rats
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Anticonvulsants/pharmacology*
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Neural Networks, Computer
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Male
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Humans
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Phenytoin/pharmacology*
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Adult
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Disease Models, Animal
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Female
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Rats, Sprague-Dawley
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Young Adult
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Convolutional Neural Networks
2.Machine learning model for prediction of bloodstream infections established based on routine test indexes and its predictive efficiency
Yan WANG ; Xin HE ; Yufang LIANG ; Gaixian WANG ; Ruifeng BAI ; Rui ZHOU
Chinese Journal of Nosocomiology 2025;35(10):1542-1548
OBJECTIVE To explore and evaluate the machine learning model for prediction of bacterial bloodstream infections established based on routine test data.METHODS By means of retrospective survey,a total of 5 421 pa-tients who were hospitalized in 3 medical institutions from Jan.2015 to Dec.2022 were recruited as the research subjects,1 914 of whom were assigned as the bloodstream infection group,and 3 507 were assigned as the non-bloodstream infection group.The baseline data including gender and age and the results of routine laboratory tests were collected from the enrolled patients.The 3 types of machine learning algorithms,logistic regression,support vector machine and random forest,were respectively used for the screening of the optimal prediction model;the contribution of feature variables to the predictive capability of the model was interpreted through SHAP.The fea-ture variables of the model were optimized by using recursive feature elimination method,and the predictive effi-ciency of the model was evaluated by the area under the curve(AUC)of receiver operating characteristic(ROC)curves.RESULTS Totally 26 variables involving age,gender and blood routine test indexes were included.The random forest was chosen as the optimal machine learning algorithm for the establishment of prediction model for bloodstream infections,and the accuracy of the model was 0.709,with the AUC 0.706.The result of SHAP ex-planation indicated that the age,hematokrit and erythrocyte volume distribution width-CV had remarkable effect on the model's making right decisions.17 variables of the prediction model showed more remarkable effect than 26 variable on distinguishing from the gram-positive bacteria bloodstream infections from the gram-negative bacteria bloodstream infections,with the AUC 0.715,the sensitivity 0.701,the specificity 0.632.CONCLUSIONS The prediction model that is established based on the blood routine test indexes by machine learning algorithm can pre-dict the bacterial bloodstream infection.Meanwhile,the feature selection strategy can further improve the predic-tive efficiency of the model on basis of lowering the dimensionality.
3.MolP-PC: a multi-view fusion and multi-task learning framework for drug ADMET property prediction.
Sishu LI ; Jing FAN ; Haiyang HE ; Ruifeng ZHOU ; Jun LIAO
Chinese Journal of Natural Medicines (English Ed.) 2025;23(11):1293-1300
The accurate prediction of drug absorption, distribution, metabolism, excretion, and toxicity (ADMET) properties represents a crucial step in early drug development for reducing failure risk. Current deep learning approaches face challenges with data sparsity and information loss due to single-molecule representation limitations and isolated predictive tasks. This research proposes molecular properties prediction with parallel-view and collaborative learning (MolP-PC), a multi-view fusion and multi-task deep learning framework that integrates 1D molecular fingerprints (MFs), 2D molecular graphs, and 3D geometric representations, incorporating an attention-gated fusion mechanism and multi-task adaptive learning strategy for precise ADMET property predictions. Experimental results demonstrate that MolP-PC achieves optimal performance in 27 of 54 tasks, with its multi-task learning (MTL) mechanism significantly enhancing predictive performance on small-scale datasets and surpassing single-task models in 41 of 54 tasks. Additional ablation studies and interpretability analyses confirm the significance of multi-view fusion in capturing multi-dimensional molecular information and enhancing model generalization. A case study examining the anticancer compound Oroxylin A demonstrates MolP-PC's effective generalization in predicting key pharmacokinetic parameters such as half-life (T0.5) and clearance (CL), indicating its practical utility in drug modeling. However, the model exhibits a tendency to underestimate volume of distribution (VD), indicating potential for improvement in analyzing compounds with high tissue distribution. This study presents an efficient and interpretable approach for ADMET property prediction, establishing a novel framework for molecular optimization and risk assessment in drug development.
Deep Learning
4.Machine learning model for prediction of bloodstream infections established based on routine test indexes and its predictive efficiency
Yan WANG ; Xin HE ; Yufang LIANG ; Gaixian WANG ; Ruifeng BAI ; Rui ZHOU
Chinese Journal of Nosocomiology 2025;35(10):1542-1548
OBJECTIVE To explore and evaluate the machine learning model for prediction of bacterial bloodstream infections established based on routine test data.METHODS By means of retrospective survey,a total of 5 421 pa-tients who were hospitalized in 3 medical institutions from Jan.2015 to Dec.2022 were recruited as the research subjects,1 914 of whom were assigned as the bloodstream infection group,and 3 507 were assigned as the non-bloodstream infection group.The baseline data including gender and age and the results of routine laboratory tests were collected from the enrolled patients.The 3 types of machine learning algorithms,logistic regression,support vector machine and random forest,were respectively used for the screening of the optimal prediction model;the contribution of feature variables to the predictive capability of the model was interpreted through SHAP.The fea-ture variables of the model were optimized by using recursive feature elimination method,and the predictive effi-ciency of the model was evaluated by the area under the curve(AUC)of receiver operating characteristic(ROC)curves.RESULTS Totally 26 variables involving age,gender and blood routine test indexes were included.The random forest was chosen as the optimal machine learning algorithm for the establishment of prediction model for bloodstream infections,and the accuracy of the model was 0.709,with the AUC 0.706.The result of SHAP ex-planation indicated that the age,hematokrit and erythrocyte volume distribution width-CV had remarkable effect on the model's making right decisions.17 variables of the prediction model showed more remarkable effect than 26 variable on distinguishing from the gram-positive bacteria bloodstream infections from the gram-negative bacteria bloodstream infections,with the AUC 0.715,the sensitivity 0.701,the specificity 0.632.CONCLUSIONS The prediction model that is established based on the blood routine test indexes by machine learning algorithm can pre-dict the bacterial bloodstream infection.Meanwhile,the feature selection strategy can further improve the predic-tive efficiency of the model on basis of lowering the dimensionality.
5.Challenges of continuous cropping obstacles in Panax ginseng: Formation and response mechanisms
Kang CHEN ; Yuru TONG ; Tielin WANG ; Xiuteng ZHOU ; Junhui ZHOU ; Yang GE ; Han ZHENG ; Muyao YU ; Yunfeng LUO ; Ruifeng JI
Science of Traditional Chinese Medicine 2025;3(1):8-14
Panax ginseng, a perennial herbaceous plant and a representative of the Panax genus, is renowned for its exceptional medicinal value and economic benefits, often referred to as the “King of Herbs.” With the increasing market demand and the limited availability of suitable cultivation land, the issue of continuous cropping obstacles for P. ginseng has become increasingly prominent, directly hindering the sustainable development of the ginseng industry. This article summarizes the concept and hazards of continuous cropping obstacles and, drawing on the latest research, provides an in-depth analysis of the causes and response mechanisms. This work aims to establish a solid foundation for future research into the mechanisms of continuous cropping obstacles in P. ginseng.
6.Challenges of continuous cropping obstacles in Panax ginseng: Formation and response mechanisms
Kang CHEN ; Yuru TONG ; Tielin WANG ; Xiuteng ZHOU ; Junhui ZHOU ; Yang GE ; Han ZHENG ; Muyao YU ; Yunfeng LUO ; Ruifeng JI
Science of Traditional Chinese Medicine 2025;3(1):8-14
Panax ginseng, a perennial herbaceous plant and a representative of the Panax genus, is renowned for its exceptional medicinal value and economic benefits, often referred to as the “King of Herbs.” With the increasing market demand and the limited availability of suitable cultivation land, the issue of continuous cropping obstacles for P. ginseng has become increasingly prominent, directly hindering the sustainable development of the ginseng industry. This article summarizes the concept and hazards of continuous cropping obstacles and, drawing on the latest research, provides an in-depth analysis of the causes and response mechanisms. This work aims to establish a solid foundation for future research into the mechanisms of continuous cropping obstacles in P. ginseng.
7.Challenges of continuous cropping obstacles in Panax ginseng: Formation and response mechanisms
Kang CHEN ; Yuru TONG ; Tielin WANG ; Xiuteng ZHOU ; Junhui ZHOU ; Yang GE ; Han ZHENG ; Muyao YU ; Yunfeng LUO ; Ruifeng JI
Science of Traditional Chinese Medicine 2025;3(1):8-14
Panax ginseng, a perennial herbaceous plant and a representative of the Panax genus, is renowned for its exceptional medicinal value and economic benefits, often referred to as the “King of Herbs.” With the increasing market demand and the limited availability of suitable cultivation land, the issue of continuous cropping obstacles for P. ginseng has become increasingly prominent, directly hindering the sustainable development of the ginseng industry. This article summarizes the concept and hazards of continuous cropping obstacles and, drawing on the latest research, provides an in-depth analysis of the causes and response mechanisms. This work aims to establish a solid foundation for future research into the mechanisms of continuous cropping obstacles in P. ginseng.
8.Guideline for the prevention of intraoperative acquired pressure injury in paraplegic patients with spinal cord injury (version 2025)
Aijun XU ; Shuixia LI ; Bo CHEN ; Mengyuan YE ; Lejiao LANG ; Ning NING ; Lin ZHANG ; Changqing LIU ; Zhonglan CHEN ; Weihu MA ; Weishi LI ; Xiaoning WANG ; Dongmei BIAN ; Jiancheng ZENG ; Xin WANG ; Yuan GAO ; Yaping CHEN ; Jiali CHEN ; Yun HAN ; Xiuting LI ; Yang ZHOU ; Xiaojing SU ; Qiong ZHANG ; Tianwen HUANG ; Ping ZHANG ; Hua LIN ; Xingling XIAO ; Ruifeng XU ; Fanghui DONG ; Bing HAN ; Luo FAN ; Yanling PEI ; Suyun LI ; Xiaoju TAN ; Rongchen GUO ; Yefang ZOU ; Xiaoyun HAN ; Junqin DING ; Yi WANG ; Shuhua DENG ; Jinli GUO ; Yinhua LIANG ; Yuan CEN ; Xiaoqin LIU ; Junru CHEN ; Haiyang YU ; Lunlan LI ; Ying REN ; Yunxia LI ; Jianli LU ; Ying YING ; Lan WEI ; Yin WANG ; Qinhong XU ; Yanqin ZHANG ; Yang LYU ; Shijun ZHANG ; Sui WENJIE ; Sanlian HU ; Shuhong YANG ; Guoqing LI ; Jingjing AN ; Baorong HE ; Leling FENG
Chinese Journal of Trauma 2025;41(6):530-541
Paraplegia caused by spinal cord injury is a serious neurological complication, for which surgery is currently the main treatment method. Due to different surgical approaches, patients are usually expected to maintain a passive prone position for a long time or switch between the supine and prone positions. Affected by multiple factors such as neurogenic sensory disorders, pathological changes in muscle tone and operative duration, the risk of intraoperative acquired pressure injury (IAPI) is significantly increased. Current clinical prevention strategies for IAPI in these patients predominantly focus on localized pressure relief during positioning, lacking systematic, standardized comprehensive prevention protocols or evidence-based guidelines. To address it, Department of Nursing, Orthopedics Branch, China International Exchange and Promotive Association for Medical and Health Care, Spinal Trauma Professional Committee, Orthopedics Branch, Chinese Medical Doctor Association, Nursing Group of Spine and Spinal Cord Professional Committee of Chinese Association of Rehabilitation Medicine organized experts in relevant fields to formulate Guideline for the prevention of intraoperative acquired pressure injury in paraplegic patients with spinal cord injury ( version 2025), based on evidence-based medical evidence and latest research results and clinical practice at home and abroad. Eleven recommendations were put forward from the aspects of preoperative risk assessment, intraoperative prevention strategies, postoperative handover and monitoring, and supportive mechanisms for IAPI prevention, aiming to standardize the prevention measures and management strategies of IAPI in paraplegic patients with spinal cord injury and accelerate the recovery of patients and improve the therapeutic effect.
9.Guideline for the prevention of intraoperative acquired pressure injury in paraplegic patients with spinal cord injury (version 2025)
Aijun XU ; Shuixia LI ; Bo CHEN ; Mengyuan YE ; Lejiao LANG ; Ning NING ; Lin ZHANG ; Changqing LIU ; Zhonglan CHEN ; Weihu MA ; Weishi LI ; Xiaoning WANG ; Dongmei BIAN ; Jiancheng ZENG ; Xin WANG ; Yuan GAO ; Yaping CHEN ; Jiali CHEN ; Yun HAN ; Xiuting LI ; Yang ZHOU ; Xiaojing SU ; Qiong ZHANG ; Tianwen HUANG ; Ping ZHANG ; Hua LIN ; Xingling XIAO ; Ruifeng XU ; Fanghui DONG ; Bing HAN ; Luo FAN ; Yanling PEI ; Suyun LI ; Xiaoju TAN ; Rongchen GUO ; Yefang ZOU ; Xiaoyun HAN ; Junqin DING ; Yi WANG ; Shuhua DENG ; Jinli GUO ; Yinhua LIANG ; Yuan CEN ; Xiaoqin LIU ; Junru CHEN ; Haiyang YU ; Lunlan LI ; Ying REN ; Yunxia LI ; Jianli LU ; Ying YING ; Lan WEI ; Yin WANG ; Qinhong XU ; Yanqin ZHANG ; Yang LYU ; Shijun ZHANG ; Sui WENJIE ; Sanlian HU ; Shuhong YANG ; Guoqing LI ; Jingjing AN ; Baorong HE ; Leling FENG
Chinese Journal of Trauma 2025;41(6):530-541
Paraplegia caused by spinal cord injury is a serious neurological complication, for which surgery is currently the main treatment method. Due to different surgical approaches, patients are usually expected to maintain a passive prone position for a long time or switch between the supine and prone positions. Affected by multiple factors such as neurogenic sensory disorders, pathological changes in muscle tone and operative duration, the risk of intraoperative acquired pressure injury (IAPI) is significantly increased. Current clinical prevention strategies for IAPI in these patients predominantly focus on localized pressure relief during positioning, lacking systematic, standardized comprehensive prevention protocols or evidence-based guidelines. To address it, Department of Nursing, Orthopedics Branch, China International Exchange and Promotive Association for Medical and Health Care, Spinal Trauma Professional Committee, Orthopedics Branch, Chinese Medical Doctor Association, Nursing Group of Spine and Spinal Cord Professional Committee of Chinese Association of Rehabilitation Medicine organized experts in relevant fields to formulate Guideline for the prevention of intraoperative acquired pressure injury in paraplegic patients with spinal cord injury ( version 2025), based on evidence-based medical evidence and latest research results and clinical practice at home and abroad. Eleven recommendations were put forward from the aspects of preoperative risk assessment, intraoperative prevention strategies, postoperative handover and monitoring, and supportive mechanisms for IAPI prevention, aiming to standardize the prevention measures and management strategies of IAPI in paraplegic patients with spinal cord injury and accelerate the recovery of patients and improve the therapeutic effect.
10.Application of Balloon Dilation Technique When Difficult Ureteroscope Accessing in Ureteroscopic Holmium Laser Lithotripsy in Children
Jingda GAO ; Yun ZHOU ; Ruifeng GAO
Chinese Journal of Minimally Invasive Surgery 2024;24(10):662-665
Objective To investigate the effectiveness and safety of balloon dilation technique when difficult ureteroscope accessing in ureteroscopic holmium laser lithotripsy in children.Methods Clinical data of 23 patients(25 sides)receiving ureteroscopic holmium laser lithotripsy with using balloon dilatation technique from March 2020 to October 2023 were retrospectively analyzed.When it was difficult to insert ureteroscope,the ureteral balloon catheter was retrogradely inserted through the ureteroscopic working channel to dilate the narrow part of the ureteral lumen.After dilation,the holmium laser fiber was inserted to powder the stones.Results Of the 23 patients(25 sides)with ureteral calculi,transcatheter ureteral balloon dilation was carried out in 26 places during the operation,including 23 places located in the inner part of the ureteral bladder wall and 3 places located in the lower part of the ureter.The extent of ureteral injury at dilated sites was grade Ⅰ in 23 places and grade Ⅱ in 3 places,respectively.After ureteral balloon dilatation,continued lithotripsy succeeded on 23 sides and failed on 2 sides.No complications related to ureteral dilated balloon catheter were found.The time for removing double-J ureteral stents was 26-45 d(mean,33.5±5.2 d),during which urinary tract infection occurred in 5 cases.Urinary system ultrasound examination was performed within 2 weeks after removal of double-J ureteral stents.The calculi were discharged in all the children,without hydronephrosis.No ureteral stenosis was observed in all the children during 6-24 months(mean,13.7 months)of postoperative follow-ups.Conclusion It is safe and effective to dilate the ureteral with balloon dilation technique through the working channel when difficult ureteroscope accessing.

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