1.Extraction and purification of NUDT9 homology domain of human transient receptor potential melastatin 2 channel.
Peiwu YE ; Xiafei YU ; Cheng MA ; Wei YANG
Journal of Zhejiang University. Medical sciences 2019;48(1):5-11
OBJECTIVE:
To develop methods of extraction and purification of Cterminal NUDT9 homology domain of human transient receptor potential melastatin 2 (TRPM2) channel.
METHODS:
After sonication and centrifuge of strain Rosetta (DE3) which was induced by isopropylthio-β-D-galactoside, GST-NUDT9-H was collected after the binding of supernatant with GST beads and eluted with reduced glutathione. Then the elution buffer containing fusion protein was purified by size exclusion chromatography after concentration and centrifuge. Finally, with the cleavage of thrombin and binding with the GST beads, NUDT9-H with high purity in supernatant was collected.
RESULTS:
The GST-NUDT9-H fusion protein was stabilized with lysis buffer containing 0.5% n-dodecyl -β-d-maltoside (DDM), and wash buffer containing 0.025% DDM in size-exclusion chromatography system, and finally the NUDT9-H with high purity was obtained after cleaved by thrombin (1 U/2 mg fusion protein) for 24 h.
CONCLUSIONS
Due to the poor stability of NUDT9-H, it is necessary to add DDM in extraction and purification buffer to stabilize the conformation of NUDT9-H, so as to increase its yields and purity.
Escherichia coli
;
genetics
;
Glucosides
;
chemistry
;
Humans
;
Protein Domains
;
Protein Stability
;
Pyrophosphatases
;
chemistry
;
genetics
;
isolation & purification
;
Recombinant Fusion Proteins
;
chemistry
;
isolation & purification
;
TRPM Cation Channels
;
chemistry
;
isolation & purification
;
Thrombin
;
metabolism
2.Preparation of anti-hCG antibody-like molecule by using a RAD peptide display system.
Mengwen LIU ; Mei WANG ; Qiong WANG ; Huawei XIN
Chinese Journal of Biotechnology 2019;35(5):871-879
By using an RAD peptide display system derived from the ATPase domain of recombinase RadA of Pyrococcus furiosus, an anti-hCG antibody-like molecule was prepared by grafting an hCG-binding peptide to the RAD scaffold. After linking to sfGFP gene, a gene of hCG peptide-grafted RAD was synthesized and cloned into a bacterial expression vector (pET30a-RAD/hCGBP-sfGFP). The vector was transformed into Escherichia coli, and expression of the fusion protein was induced. After isolation and purification of the fusion protein, its binding affinity and specificity to hCG were determined by using a process of immunoabsorption followed by GFP fluorescence measurement. A comparison of hCG-binding activity with a similarly grafted single-domain antibody based on a universal scaffold was performed. The measurement of hCG-binding affinity and specificity revealed that the grafted RAD has an optimally high binding affinity and specificity to hCG, which are better than the grafted single-domain antibody. Moreover, the affinity and specificity of grafted RAD molecule are comparable to those of a commercial monoclonal antibody. In addition, the hCG-binding peptide-grafted RAD molecule has a relatively high biochemical stability, making it a good substitute for antibody with potential application.
Antibodies, Monoclonal
;
chemistry
;
isolation & purification
;
metabolism
;
Antibody Specificity
;
DNA-Binding Proteins
;
genetics
;
metabolism
;
Escherichia coli
;
genetics
;
Escherichia coli Proteins
;
metabolism
;
Humans
;
Peptides
;
Recombinant Fusion Proteins
;
genetics
;
metabolism
3.The binding of a monoclonal antibody to the apical region of SCARB2 blocks EV71 infection.
Xuyuan ZHANG ; Pan YANG ; Nan WANG ; Jialong ZHANG ; Jingyun LI ; Hao GUO ; Xiangyun YIN ; Zihe RAO ; Xiangxi WANG ; Liguo ZHANG
Protein & Cell 2017;8(8):590-600
Entero virus 71 (EV71) causes hand, foot, and mouth disease (HFMD) and occasionally leads to severe neurological complications and even death. Scavenger receptor class B member 2 (SCARB2) is a functional receptor for EV71, that mediates viral attachment, internalization, and uncoating. However, the exact binding site of EV71 on SCARB2 is unknown. In this study, we generated a monoclonal antibody (mAb) that binds to human but not mouse SCARB2. It is named JL2, and it can effectively inhibit EV71 infection of target cells. Using a set of chimeras of human and mouse SCARB2, we identified that the region containing residues 77-113 of human SCARB2 contributes significantly to JL2 binding. The structure of the SCARB2-JL2 complex revealed that JL2 binds to the apical region of SCARB2 involving α-helices 2, 5, and 14. Our results provide new insights into the potential binding sites for EV71 on SCARB2 and the molecular mechanism of EV71 entry.
Amino Acid Sequence
;
Animals
;
Antibodies, Monoclonal
;
chemistry
;
genetics
;
metabolism
;
Binding Sites
;
Cell Line
;
Crystallography, X-Ray
;
Enterovirus A, Human
;
drug effects
;
genetics
;
growth & development
;
immunology
;
Fibroblasts
;
drug effects
;
virology
;
Gene Expression
;
HEK293 Cells
;
Humans
;
Immunoglobulin Fab Fragments
;
chemistry
;
genetics
;
metabolism
;
Lysosome-Associated Membrane Glycoproteins
;
chemistry
;
genetics
;
immunology
;
Mice
;
Models, Molecular
;
Protein Binding
;
Protein Conformation, alpha-Helical
;
Protein Conformation, beta-Strand
;
Protein Interaction Domains and Motifs
;
Receptors, Scavenger
;
chemistry
;
genetics
;
immunology
;
Receptors, Virus
;
chemistry
;
genetics
;
immunology
;
Recombinant Fusion Proteins
;
chemistry
;
genetics
;
immunology
;
Sequence Alignment
;
Sequence Homology, Amino Acid
;
Sf9 Cells
;
Spodoptera
;
Thermodynamics
4.Increasing the safety and efficacy of chimeric antigen receptor T cell therapy.
Protein & Cell 2017;8(8):573-589
Chimeric antigen receptor (CAR) T cell therapy is a promising cancer treatment that has recently been undergoing rapid development. However, there are still some major challenges, including precise tumor targeting to avoid off-target or "on-target/off-tumor" toxicity, adequate T cell infiltration and migration to solid tumors and T cell proliferation and persistence across the physical and biochemical barriers of solid tumors. In this review, we focus on the primary challenges and strategies to design safe and effective CAR T cells, including using novel cutting-edge technologies for CAR and vector designs to increase both the safety and efficacy, further T cell modification to overcome the tumor-associated immune suppression, and using gene editing technologies to generate universal CAR T cells. All these efforts promote the development and evolution of CAR T cell therapy and move toward our ultimate goal-curing cancer with high safety, high efficacy, and low cost.
Cell Movement
;
immunology
;
Cell Proliferation
;
Gene Expression
;
Genetic Vectors
;
chemistry
;
metabolism
;
Humans
;
Immunotherapy, Adoptive
;
methods
;
Lymphocyte Activation
;
Lymphocytes, Tumor-Infiltrating
;
cytology
;
immunology
;
transplantation
;
Neoplasms
;
genetics
;
immunology
;
pathology
;
therapy
;
Patient Safety
;
Receptors, Antigen, T-Cell
;
chemistry
;
genetics
;
immunology
;
Recombinant Fusion Proteins
;
chemistry
;
genetics
;
immunology
;
Signal Transduction
;
Single-Chain Antibodies
;
chemistry
;
genetics
;
T-Lymphocytes
;
cytology
;
immunology
;
transplantation
;
Treatment Outcome
5.Prokaryotic expression and purification of Chlamydomonas reinhardtii intraflagellar transport protein 46(IFT46) and preparation of polyclonal antibody.
Haiyue REN ; Bin DONG ; Zhenchuan FAN ; Demei MENG
Chinese Journal of Biotechnology 2016;32(8):1124-1132
IFT46 is one of the important components of intraflagellar transport complex B in Chlamydomonas reinhardtii, and plays important roles in the assembly, movement and perception of ciliary. To study its functional mechanism, a GST-tagged and an MBP-tagged prokaryotic expression plasmid, pGEX-2T-ift46 and pMAL-C2X-ift46 were constructed, respectively, by inserting ift46 into the pGEX-2T and pMAL-C2X vector, and then transformed into Escherichia coli BL21 (DE3) for protein expression. SDS-PAGE (15%) analysis results showed that the molecular weights of the fusion protein GST-IFT46 and MBP-IFT46 were 70 kDa and 86 kDa, respectively. We used the fusion protein GST-IFT46 purified by affinity adsorption purification (more than 95% purity) for immunity to New Zealand white rabbits. The 5th immune serum was collected and the antibody titer was determined to be 256 000 by ELISA. The antiserum was purified by Protein A affinity adsorption purification and immobilized MBP-IFT46 purification, and the specificity of polyclonal antibodies was evaluated by Western blotting and immunofluorescence. Results showed that the polyclonal antibody prepared could specifically and precisely bind IFT46 in C. reinhardtii, and IFT46 was mainly concentrated at basal body regions and few localized along the entire length of the flagellum as punctuated dots, which will make a foundation to further study the mechanism of IFT46 in cilia related diseases such as obesity, diabetes and polycystic kidney disease.
Algal Proteins
;
biosynthesis
;
immunology
;
Animals
;
Antibodies
;
chemistry
;
Blotting, Western
;
Chlamydomonas reinhardtii
;
chemistry
;
genetics
;
Electrophoresis, Polyacrylamide Gel
;
Enzyme-Linked Immunosorbent Assay
;
Escherichia coli
;
Fluorescent Antibody Technique
;
Intracellular Signaling Peptides and Proteins
;
biosynthesis
;
immunology
;
Plasmids
;
Rabbits
;
Recombinant Fusion Proteins
;
biosynthesis
6.Effect of the hydrophobin HFBI-fusion tag on exogenous protein accumulation in tobacco plant.
Xiqian ZHANG ; Hongzhen MU ; Ting MA ; Xiangzhen DING ; Zhiying LI ; Sheng WANG
Journal of Southern Medical University 2015;35(12):1665-1671
OBJECTIVETo explore the mechanisms by which HFBI fusions increase recombinant fusion protein accumulation in plants.
METHODSThe HFBI sequence from Trichoderma reesei was synthesized and two plant expression vectors for expression of green fluorescence protein (GFP) and GFP-HFBI were constructed. The vectors were inoculated in Nicotiana benthamiana plants through agroinfiltration, and the expression levels and mRNA accumulation levels of GFP in Nicotiana leaves were examined by Western blotting, ELISA and RT-PCR.
RESULTSThe HFBI fusion tag significantly enhanced the accumulation of GFP in the leaves of N. benthamiana without causing toxic effects. Endoplasmic reticulum-targeted GFP-HFBI fusion induced the formation of spherical protein particles in the plant cells.
CONCLUSIONHFBI fusions can increase the accumulation of its fusion partner in plants by forming stable protein particles, which probably shields the target protein from endogenous protease-induced degadation. HFBI fusion technology provides an alternative to improving recombinant protein expression in plants from agroinfection-compatible expression vectors.
Endoplasmic Reticulum ; Genetic Engineering ; methods ; Genetic Vectors ; Green Fluorescent Proteins ; biosynthesis ; Imidazoles ; chemistry ; Plant Leaves ; metabolism ; Plants, Genetically Modified ; genetics ; metabolism ; Recombinant Fusion Proteins ; biosynthesis ; Tobacco ; genetics ; metabolism
7.Construction and Expression of RNase-Resisting His-Tagged Virus-Like Particles Containing FluA/B mRNA.
Jin ZHANG ; Xiaoning XUE ; Hefei XU ; Ke ZHU ; Xiaoguang CHEN ; Juan ZHANG ; Qi ZHANG ; Yuan LIN
Chinese Journal of Virology 2015;31(6):629-633
To prepare virus-like particles containing FluA/B mRNA as RNA standard and control in Influenza RNA detection, the genes coding the coat protein and maturase of E. coli bacteriophage MS2 were amplified and cloned into D-pET32a vector. Then we inserted 6 histidines to MS2 coat protein by QuikChange Site-Directed Mutagenesis Kit to construct the universal expressing vector D-pET32a-CP-His. In addition, the partial gene fragments of FluA and FluB were cloned to the down-stream of expressing vector. The recombinant plasmid D-pET32a-CP-His-FluA/B was transformed to BL21 with induction by IPTG. The virus-like particles were purified by Ni+ chromatography. The virus-like particles can be detected by RT-PCR, but not PCR. They can be conserved stably for at least 3 months at both 4 degrees C and -20 degrees C. His-tagged virus-like particles are more stable and easier to purification. It can be used as RNA standard and control in Influenza virus RNA detection.
Escherichia coli
;
genetics
;
metabolism
;
Influenza A virus
;
genetics
;
metabolism
;
Influenza B virus
;
genetics
;
metabolism
;
RNA, Messenger
;
genetics
;
metabolism
;
RNA, Viral
;
genetics
;
metabolism
;
Recombinant Fusion Proteins
;
genetics
;
metabolism
;
Ribonucleases
;
chemistry
;
Virion
;
genetics
;
metabolism
8.Human atlastin GTPases mediate differentiated fusion of endoplasmic reticulum membranes.
Xiaoyu HU ; Fuyun WU ; Sha SUN ; Wenying YU ; Junjie HU
Protein & Cell 2015;6(4):307-311
Animals
;
COS Cells
;
Cercopithecus aethiops
;
Endoplasmic Reticulum
;
GTP Phosphohydrolases
;
antagonists & inhibitors
;
chemistry
;
genetics
;
metabolism
;
GTP-Binding Proteins
;
antagonists & inhibitors
;
chemistry
;
genetics
;
metabolism
;
Gene Expression
;
Genetic Complementation Test
;
HeLa Cells
;
Humans
;
Kinetics
;
Membrane Fusion
;
genetics
;
Membrane Proteins
;
antagonists & inhibitors
;
chemistry
;
genetics
;
metabolism
;
Protein Multimerization
;
RNA, Small Interfering
;
genetics
;
metabolism
;
Recombinant Proteins
;
chemistry
;
genetics
;
metabolism
;
Saccharomyces cerevisiae
;
genetics
;
metabolism
;
Saccharomyces cerevisiae Proteins
;
genetics
;
metabolism
;
Vesicular Transport Proteins
;
genetics
;
metabolism
9.Expression of Translationally Controlled Tumor Protein (TCTP) Gene of Dirofilaria immitis Guided by Transcriptomic Screening.
Yan FU ; Jingchao LAN ; Xuhang WU ; Deying YANG ; Zhihe ZHANG ; Huaming NIE ; Rong HOU ; Runhui ZHANG ; Wanpeng ZHENG ; Yue XIE ; Ning YAN ; Zhi YANG ; Chengdong WANG ; Li LUO ; Li LIU ; Xiaobin GU ; Shuxian WANG ; Xuerong PENG ; Guangyou YANG
The Korean Journal of Parasitology 2014;52(1):21-26
Dirofilaria immitis (heartworm) infections affect domestic dogs, cats, and various wild mammals with increasing incidence in temperate and tropical areas. More sensitive antibody detection methodologies are required to diagnose asymptomatic dirofilariasis with low worm burdens. Applying current transcriptomic technologies would be useful to discover potential diagnostic markers for D. immitis infection. A filarial homologue of the mammalian translationally controlled tumor protein (TCTP) was initially identified by screening the assembled transcriptome of D. immitis (DiTCTP). A BLAST analysis suggested that the DiTCTP gene shared the highest similarity with TCTP from Loa loa at protein level (97%). A histidine-tagged recombinant DiTCTP protein (rDiTCTP) of 40 kDa expressed in Escherichia coli BL21 (DE3) showed immunoreactivity with serum from a dog experimentally infected with heartworms. Localization studies illustrated the ubiquitous presence of rDiTCTP protein in the lateral hypodermal chords, dorsal hypodermal chord, muscle, intestine, and uterus in female adult worms. Further studies on D. immitis-derived TCTP are warranted to assess whether this filarial protein could be used for a diagnostic purpose.
Animal Structures/chemistry
;
Animals
;
Antibodies, Helminth/blood
;
Antigens, Helminth/chemistry/*genetics/immunology/*isolation & purification
;
Cloning, Molecular
;
Dirofilaria immitis/chemistry/*genetics/immunology
;
Disease Models, Animal
;
Dogs
;
Escherichia coli/genetics
;
Gene Expression
;
Molecular Sequence Data
;
Molecular Weight
;
Recombinant Fusion Proteins/chemistry/genetics/immunology/isolation & purification
;
Sequence Analysis, DNA
;
Tumor Markers, Biological/chemistry/*genetics/immunology/*isolation & purification
10.An antibody reactive to the Gly63-Lys68 epitope of NT-proBNP exhibits O-glycosylation-independent binding.
Yujean LEE ; Hyori KIM ; Junho CHUNG
Experimental & Molecular Medicine 2014;46(9):e114-
The N-terminal fragment of prohormone brain natriuretic peptide (NT-proBNP) is a commonly used biomarker for the diagnosis of congestive heart failure, although its biological function is not well known. NT-proBNP exhibits heavy O-linked glycosylation, and it is quite difficult to develop an antibody that exhibits glycosylation-independent binding. We developed an antibody that binds to the recombinant NT-proBNP protein and its deglycosylated form with similar affinities in an enzyme immunoassay. The epitope was defined as Gly63-Lys68 based on mimetic peptide screening, site-directed mutagenesis and a competition assay with a peptide mimotope. The nearest O-glycosylation residues are Thr58 and Thr71; therefore, four amino acid residues intervene between the epitope and those residues in both directions. In conclusion, we report that an antibody reactive to Gly63-Lys68 of NT-proBNP exhibits O-glycosylation-independent binding.
Amino Acid Sequence
;
Animals
;
Antibodies/*immunology
;
Antigen-Antibody Reactions
;
Epitope Mapping
;
Epitopes/chemistry/genetics/*immunology
;
Glycosylation
;
HEK293 Cells
;
Heart Failure/immunology
;
Humans
;
Molecular Sequence Data
;
Mutagenesis, Site-Directed
;
Natriuretic Peptide, Brain/chemistry/genetics/*immunology
;
Peptide Fragments/chemistry/genetics/*immunology
;
Rabbits
;
Recombinant Fusion Proteins/chemistry/genetics/immunology

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