1.Heterologous expression and function evaluation of Gloeobacter violaceus rhodopsin in Escherichia coli.
Jiayu FANG ; Taicheng ZHU ; Yanping ZHANG ; Yin LI
Chinese Journal of Biotechnology 2021;37(2):604-614
Proton-pumping rhodopsin (PPR) is a simple photosystem widely distributed in nature. By binding to retinal, PPR can transfer protons from the cytoplasmic to the extracellular side of the membrane under illumination, creating a proton motive force (PMF) to synthesize ATP. The conversion of light into chemical energy by introducing rhodopsin into nonphotosynthetic engineered strains could contribute to promoting growth, increasing production and improving cell tolerance of microbial hosts. Gloeorhodopsin (GR) is a PPR from Gloeobacter violaceus PCC 7421. We expressed GR heterologously in Escherichia coli and verified its functional activity. GR could properly function as a light-driven proton pump and its absorption maximum was at 539 nm. We observed that GR was mainly located on the cell membrane and no inclusion body could be found. After increasing expression level by ribosome binding site optimization, intracellular ATP increased, suggesting that GR could supply additional energy to heterologous hosts under given conditions.
Cyanobacteria/metabolism*
;
Escherichia coli/metabolism*
;
Proton Pumps
;
Rhodopsin/metabolism*
;
Rhodopsins, Microbial/metabolism*
2.Efficacy of Dairy Free Diet and 6-Food Elimination Diet as Initial Therapy for Pediatric Eosinophilic Esophagitis: A Retrospective Single-Center Study
Jonathan WONG ; Sue GOODINE ; Kate SAMELA ; Katherine S VANCE ; Beth CHATFIELD ; Zhu WANG ; Wael N SAYEJ
Pediatric Gastroenterology, Hepatology & Nutrition 2020;23(1):79-88
12 weeks) were 81.8%, 50.0%, and 55.1% for DFD, and 68.8%, 50.0%, and 40.0% for SFED. Response based on age ( < 6, 6–12, and >12 years) were 59.3%, 42.9%, and 67.5% for DFD, and 36.4%, 58.8%, and 72.7% for SFED. In patients treated with DFD, concomitant proton pump inhibitor (PPI) administration resulted in improved outcomes (p=0.0177). Bivariate regression analysis showed that PPI with diet is the only predictor of response (p=0.0491), however, there were no significant predictors on multiple regression analysis.CONCLUSION: DFD and SFED are effective first line therapies for EoE. DFD should be tried first before extensive elimination diets. Concomitant therapy with PPI's may be helpful.]]>
Child
;
Connecticut
;
Diet
;
Endoscopy
;
Eosinophilic Esophagitis
;
Eosinophils
;
Humans
;
Male
;
Proton Pump Inhibitors
;
Proton Pumps
;
Retrospective Studies
3.Comparison of 7- and 14-Day Eradication Therapy for Helicobacter pylori with First- and Second-Line Regimen: Randomized Clinical Trial
Tae Ho KIM ; Jae Myung PARK ; Dae Young CHEUNG ; Jung Hwan OH
Journal of Korean Medical Science 2020;35(5):33-
proton pump inhibitor (PPI)-based standard triple therapy (STT; PPI-clarithromycin-amoxicillin). Bismuth-containing quadruple therapy was used as second-line therapy. Eradication success was defined as a negative ¹³C-urea breath test.RESULTS: In first-line treatment, eradication rate was 78.5% (106/135) and 78.6% (114/143) in the 7-day and 14-day treatment in per-protocol (PP) analysis (P = 0.805). In intention-to-treat (ITT) analysis, eradication rate was 64.0% (114/178) and 66.0% (126/191), respectively (P = 0.924). There was no significant difference in drug compliance (81.5% vs. 84.3%, P = 0.320). In second-line therapy, eradication rate was not significantly different in both treatments of PP analysis (91.7% [33/36] vs. 100% [45/45], P = 0.084). In the ITT analysis, eradication rate was 79.6% (35/44) and 90.4% (47/52), respectively (P = 0.080). Drug compliances were not significantly different between the two groups (95.5% vs. 98.1%, P = 0.728).CONCLUSION: PPI-based STT for H. pylori is not efficient as a first-line therapy both in 7 days and 14 days in Korea. Although bismuth-containing quadruple therapy for 14 days as a second line therapy tend to show higher eradication rate compared to 7-day therapy, this should be elucidated by further larger scaled studies.TRIAL REGISTRATION: ClinicalTrials.gov Identifier: NCT02487511]]>
Anti-Bacterial Agents
;
Breath Tests
;
Compliance
;
Drug Resistance
;
Helicobacter pylori
;
Helicobacter
;
Humans
;
Korea
;
Proton Pump Inhibitors
;
Proton Pumps
;
Stomach Neoplasms
;
Treatment Outcome
4.Multicenter Prospective Study of Laparoscopic Nissen Fundoplication for Gastroesophageal Reflux Disease in Korea
Sungsoo PARK ; Joong Min PARK ; Jin Jo KIM ; In Seob LEE ; Sang Uk HAN ; Kyung Won SEO ; Jin Won KWON
Journal of Neurogastroenterology and Motility 2019;25(3):394-402
BACKGROUNDS/AIMS: This multicenter study aims to evaluate the effect and feasibility of anti-reflux surgery compared with medical treatment for gastroesophageal reflux disease (GERD). METHODS: Patients with GERD who were undergoing medical treatment with proton pump inhibitors for more than 8 weeks and those who were scheduled to undergo anti-reflux surgery were enrolled. Efficacy of pre-operative medical treatment was evaluated retrospectively and effect of anti-reflux surgery was prospectively evaluated at 1 week and 3 months after surgery. Quality of life (QOL) was also investigated before and after surgery. RESULTS: Between February and October 2018, 51 patients underwent laparoscopic Nissen fundoplication for treating GERD at 5 hospitals in Korea. Thirty-four patients (66.7%) showed poor proton pump inhibitor response. At 3 months after surgery, heartburn was completely resolved in 87.9% patients and partially improved in 9.1%. Acid regurgitation was completely resolved in 82.9% and partially improved in 11.4%. Atypical extraesophageal symptoms were completely controlled in 45.5% and partially controlled in 36.4%. GERD-related QOL scores at 1 week after surgery significantly improved compared with pre-operative scores. There was no difference in GERD-related QOL scores between 1 week and 3 months after surgery. General QOL measured with European QOL-5 dimensions and health-related QOL instrument with 8 items significantly improved after anti-reflux surgery. Satisfaction with treatment was significantly higher after surgery than before surgery (72.5% vs 11.8%, P < 0.001). CONCLUSION: Anti-reflux surgery improved GERD symptoms and QOL in patients. Anti-reflux surgery is an effective treatment option compared with medical treatment for GERD patients selected for surgical treatment.
Fundoplication
;
Gastroesophageal Reflux
;
Heartburn
;
Humans
;
Korea
;
Laparoscopy
;
Prospective Studies
;
Proton Pump Inhibitors
;
Proton Pumps
;
Quality of Life
;
Retrospective Studies
5.Diagnosis and Management of Functional Chest Pain in the Rome IV Era
Ronnie FASS ; Fahmi SHIBLI ; Jose TAWIL
Journal of Neurogastroenterology and Motility 2019;25(4):487-498
Functional chest pain accounts for about a third of the patients with noncardiac chest pain. It is a very common functional esophageal disorder that remains even today a management challenge to the practicing physician. Based on the definition offered by the Rome IV criteria, diagnosis of functional chest pain requires a negative workup of noncardiac chest pain patients that includes, proton pump inhibitor test or empirical proton pump inhibitor trial, endoscopy with esophageal mucosal biopsies, reflux testing, and esophageal manometry. The mainstay of treatment are neuromodulators that are primarily composed of anti-depressants. Alternative medicine and psychological interventions may be provided alone or in combination with other therapeutic modalities.
Biopsy
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Chest Pain
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Complementary Therapies
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Diagnosis
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Endoscopy
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Humans
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Manometry
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Neurotransmitter Agents
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Proton Pump Inhibitors
;
Proton Pumps
;
Thorax
6.Proton pump inhibitor intake negatively affects the osseointegration of dental implants: a retrospective study
Mehmet Ali ALTAY ; Alper SINDEL ; Oznur ÖZALP ; Nelli YILDIRIMYAN ; Burak KOCABALKAN
Journal of the Korean Association of Oral and Maxillofacial Surgeons 2019;45(3):135-140
OBJECTIVES: This study sought to investigate the association between the systemic intake of proton pump inhibitors (PPI) and the early failure of dental implants. MATERIALS AND METHODS: A retrospective cohort study involving 1,918 dental implants in 592 patients (69 implants in 24 PPI users and 1,849 implants in 568 nonusers, respectively) was conducted. The effect of PPI intake on the osseointegration of dental implants was evaluated using patient- and implant-level models. RESULTS: Among 24 PPI users, two patients experienced implant failure, one of whom had three and the other of whom had one failed implant, respectively. Thus, the rate of failure for this population was 8.3%. Separately, 11 nonusers each experienced one implant failure, and the failure rate for these patients was 1.9%. Fisher's exact test revealed statistically significant differences between PPI users and nonusers at the implant level (P=0.002) but failed to show any significance at the patient level (P=0.094). The odds of implant failure were 4.60 times greater among PPI users versus nonusers. Dental implants that were placed in patients using PPIs were found to be 4.30 times more likely to fail prior to loading. CONCLUSION: The findings of this study suggest that PPI intake may be associated with an increased risk of early dental implant failure.
Cohort Studies
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Dental Implantation
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Dental Implants
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Humans
;
Morinda
;
Osseointegration
;
Proton Pump Inhibitors
;
Proton Pumps
;
Protons
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Rehabilitation
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Retrospective Studies
;
Risk Factors
7.A Case of Eosinophilic Esophagitis Associated with Herpes Esophagitis in a Pediatric Patient
Jisun KIM ; Kunsong LEE ; Wonae LEE
Clinical Endoscopy 2019;52(6):606-611
Eosinophilic esophagitis is a rare disease in Asian countries, but its incidence is growing rapidly in Western countries. The main pathophysiology of eosinophilic esophagitis is esophageal epithelial barrier dysfunction; disruption of the esophageal epithelial barrier easily induces antigen sensitization to foods and aeroallergens, which leads to subsequent esophageal inflammation as a result of eosinophil recruitment. Here we report a case of an 11-year-old Korean boy who suffered from fever, odynophagia, dysphagia, and chest pain. His upper endoscopic findings showed longitudinal ulcers with a volcano-like appearance at the distal esophagus. Polymerase chain reaction test results and biopsy specimens were positive for herpes simplex virus type 1. He was treated with acyclovir and a proton pump inhibitor, but his follow-up endoscopy showed typical patterns of eosinophilic esophagitis, and the biopsy specimens were compatible with the diagnostic criteria for eosinophilic esophagitis. Therefore, we report a very rare case of eosinophilic esophagitis after herpes esophagitis in a Korean child with normal immunity.
Acyclovir
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Asian Continental Ancestry Group
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Biopsy
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Chest Pain
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Child
;
Deglutition Disorders
;
Endoscopy
;
Eosinophilic Esophagitis
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Eosinophils
;
Esophagitis
;
Esophagus
;
Fever
;
Follow-Up Studies
;
Herpesvirus 1, Human
;
Humans
;
Incidence
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Inflammation
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Male
;
Polymerase Chain Reaction
;
Proton Pumps
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Rare Diseases
;
Simplexvirus
;
Ulcer
8.Risk Factors of Multiple Gastric Polyps according to the Histologic Classification: Prospective Observational Cohort Study
Chan Young JEONG ; Nayoung KIM ; Hye Seung LEE ; Hyuk YOON ; Cheol Min SHIN ; Young Soo PARK ; Jin Wook KIM ; Dong Ho LEE
The Korean Journal of Gastroenterology 2019;74(1):17-29
BACKGROUND/AIMS: The aim of this study was to determine the risk factors of multiple gastric polyps according to the histological classification of gastric polyps.METHODS: Subjects with multiple gastric polyps (at least three) during endoscopy were enrolled prospectively. They were assigned to a fundic gland polyp (FGP) group and hyperplastic polyp (HP) group based on a histological classification of gastric polyps. Helicobacter pylori (H. pylori) was confirmed by its histology. Serum gastrin was measured using the radioimmunoassay method. A questionnaire was taken regarding the intake of proton pump inhibitor and nonsteroidal anti-inflammatory drugs, alcohol, smoking history, and diet.RESULTS: Among the 60 subjects enrolled from 2015 to 2018 at Seoul National University Bungdang Hospital, 47 and 13 subjects were assigned to the FGP and HP groups, respectively. The H. pylori infection rate was 12.8% in the FGP group, which is lower than that in the HP group (69.2%, p<0.001). The gastrin level was higher in the HP group (194.7 pg/dL, range 50.6–387.8 pg/dL) than in the FGP group (57.4 pg/dL, range 24.8–79.0 pg/dL) (p=0.007). Histologically, neutrophil infiltration in the antrum and body of the stomach were higher in the HP group than in the FGP group (p=0.022 and p=0.030, respectively). In contrast, monocyte infiltration in the antrum and body of the stomach were higher in the FGP group than in the HP group (p=0.018 and p<0.001, respectively).CONCLUSIONS: HPs arise from inflammation caused by H. pylori. On the other hand, the FGP was not associated with H. pylori or environmental factors.
Classification
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Cohort Studies
;
Diet
;
Endoscopy
;
Gastrins
;
Hand
;
Helicobacter pylori
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Inflammation
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Methods
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Monocytes
;
Neutrophil Infiltration
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Polyps
;
Prospective Studies
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Proton Pump Inhibitors
;
Proton Pumps
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Radioimmunoassay
;
Risk Factors
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Seoul
;
Smoke
;
Smoking
;
Stomach
9.Issues on the Stress Ulcer Prophylaxis Using Proton Pump Inhibitor in Intensive Care Unit
The Korean Journal of Gastroenterology 2019;74(2):123-125
No abstract available.
Critical Care
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Intensive Care Units
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Proton Pumps
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Protons
;
Ulcer
10.A Review of Making the Modern Diagnosis of Gastrointestinal Reflux Disease: the Lyon Consensus
The Korean Journal of Gastroenterology 2019;74(6):321-325
Gastroesophageal reflux disease (GERD) is diagnosed according to the medical history or in response to proton pump inhibitor therapy. However, the need for further testing is always appropriate. The decisive evidence for the current diagnosis of GERD is severe erosive esophagitis of Los Angeles grade C or D, long-segment Barrett's mucosa or peptic strictures seen on endoscopy or an acid exposure time >6% on ambulatory pH or pH impedance monitoring. If ambulatory reflux monitoring correlates between reflux and the symptoms, then the diagnosis and treatment are certain. If it is difficult to clearly diagnose this malady as seen upon endoscopy and ph/pH impedance monitoring, then this review recommends the biopsy findings, motor evaluation and novel impedance metrics. Novel impedance metrics include the baseline impedance and the post reflux swallow-induced peristaltic wave index. Therefore, making a future GERD diagnosis should focus on defining the patient's phenotype. The phenotype is determined by the level of reflux exposure, clearance efficacy, anatomy of the esophageal gastric junction, and the psychological state of the patient. The purpose of this review is to clarify the diagnostic guideline for GERD according to several test methods.
Biopsy
;
Consensus
;
Constriction, Pathologic
;
Diagnosis
;
Electric Impedance
;
Endoscopy
;
Esophageal pH Monitoring
;
Esophagitis
;
Gastroesophageal Reflux
;
Humans
;
Hydrogen-Ion Concentration
;
Manometry
;
Mucous Membrane
;
Phenotype
;
Proton Pumps

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