1.Advances in plant heavy metal transporter P1B-ATPases.
Penghu AN ; Duomin ZHANG ; Zifang ZHOU ; Dan HAN ; Zicheng XU ; Wuxing HUANG
Chinese Journal of Biotechnology 2021;37(9):3020-3030
P1B-ATPases are a group of proteins that can transport heavy metal ions across membranes by hydrolyzing ATP and they are a subclass of the P-type ATPase family. It was found that P1B-ATPases are mainly responsible for the active transport of heavy metal ions in plants and play an important role in the regulation of heavy metal homeostasis in plants. In this paper, we dissusses the mechanism of P1B-ATPases from the structure and classification of P1B-ATPases, and review the current research progress in the function of P1B-ATPases, in order to provide reference for future research and application of P1B-ATPases in improving crop quality and ecological environment management.
Adenosine Triphosphatases/metabolism*
;
Biological Transport
;
Metals, Heavy
;
Plants/enzymology*
2.Structure, function and application of serine carboxypeptidase-like acyltransferases from plants.
Yu WANG ; Yan YANG ; Minzhi LIU ; Wei WANG
Chinese Journal of Biotechnology 2021;37(6):1887-1899
Plant serine carboxypeptidase-like acyltransferases (SCPL-AT) have similar structural characteristics and high homology compared to the serine carboxypeptidase. They can transfer the acyl from acyl glucose esters to many natural products, participate in the acylation modification of plant secondary metabolites, enrich the structural diversity of natural products, and improve the physicochemical properties such as water solubility and stability of compounds. This review summarizes the structural characteristics, catalytic mechanism, functional characterization, and biocatalytic applications of SCPL-AT from plants. This will help to promote the functional characterization of these acyltransferase genes and the biosynthesis of useful plant secondary metabolites by synthetic biotechnology.
Acylation
;
Acyltransferases/metabolism*
;
Carboxypeptidases/metabolism*
;
Plants/enzymology*
3.Vitellaria paradoxa nutshells from seven sub-Saharan countries as potential herbal medicines for treating diabetes based on chemical compositions, HPLC fingerprints and bioactivity evaluation.
Da LI ; Jian-Qi XIAO ; Wen-Yuan LIU ; Chao-Feng ZHANG ; Toshihiro AKIHISA ; Masahiko ABE ; Eliot-T MASTERS ; Wei-Wei ZHAI ; Feng FENG ; Jie ZHANG
Chinese Journal of Natural Medicines (English Ed.) 2019;17(6):446-460
The aim of the study was to determine the feasibility of the Vitellaria paradoxa nutshell as a new medicinal resource for treating diabetes. A total of forty-one compounds were identified by HPLC-DAD-Q-TOF-MS and phytochemical methods in V. paradoxa nutshell methanol extract. Based on HPLC fingerprints, four characteristic constituents were quantified and the origin of twenty-eight V. paradoxa nutshells from seven sub-Saharan countries was compared, which were classified into three groups with chemometric method. Twenty-eight samples contained high total phenolic content, and exhibited moderate-higher antioxidant activity and strong α-glucosidase inhibitory activity. Furthermore, all fractions and isolated compounds were evaluated for their antioxidant and α-glucosidase inhibitory activities, and α-glucosidase inhibitory action mechanism of four characteristic constituents including protocatechuic acid, 3, 5, 7-trihydroxycoumarin, (2R, 3R)-(+)-taxifolin and quercetin was investigated via molecular docking method, which were all stabilized by hydrogen bonds with α-glucosidase. The study provided an effective approach to waste utilization of V. paradoxa nutshell, which would help to resolve waste environmental pollution and provide a basis for developing potential herbal resource for treating diabetes.
Africa South of the Sahara
;
Chromatography, High Pressure Liquid
;
Diabetes Mellitus
;
drug therapy
;
enzymology
;
Glycoside Hydrolase Inhibitors
;
chemistry
;
pharmacology
;
Humans
;
Hypoglycemic Agents
;
chemistry
;
pharmacology
;
Molecular Docking Simulation
;
Plant Extracts
;
chemistry
;
pharmacology
;
Plants, Medicinal
;
chemistry
;
Sapotaceae
;
chemistry
;
alpha-Glucosidases
;
metabolism
4.Cloning,expression and characterization of chalcone isomerase from medicinal plant Chinese sumac (Rhus chinensis).
Xiao-Yue YANG ; Jing WANG ; Chen LI ; Zhu-Mei REN ; Wen-Li MA
China Journal of Chinese Materia Medica 2019;44(15):3253-3260
Flavonoids are a group of secondary metabolites found in plants. They have many pharmacological functions and play an important role in Chinese sumac( Rhus chinensis),which is a well-known traditional Chinese medicinal plant. Chalcone isomerase( CHI,EC 5. 5. 1. 6) is one of the key enzymes in the flavonoids biosynthesis pathway. In this paper,the full-length c DNA sequence encoding the chalcone isomerase from R. chinensis( designated as Rc CHI) was cloned by RT-PCR and rapid-amplification of c DNA Ends( RACE). The Rc CHI c DNA sequence was 1 058 bp and the open reading frame( ORF) was 738 bp. The ORF predicted to encode a 245-amino acid polypeptide. Rc CHI gene contained an intron and two exons. The sequence alignments revealed Rc CHI shared47. 1%-71. 6% identity with the homologues in other plants. Real-time PCR analysis showed that the total flavonoid levels were positively correlated with tissue-specific expressions of Rc CHI mRNA in different tissues. The recombinant protein was successfully expressed in an Escherichia coli strain with the p GEX-6 P-1 vector. In this paper,the CHI gene was cloned and characterized in the family of Anacardiaceae and will help us to obtain better knowledge of the flavonoids biosynthesis of the flavonoid compounds in R. chinensis.
Cloning, Molecular
;
DNA, Complementary
;
Flavonoids
;
biosynthesis
;
Intramolecular Lyases
;
genetics
;
Plants, Medicinal
;
enzymology
;
genetics
;
Rhus
;
enzymology
;
genetics
5.Recent Advances in Function-based Metagenomic Screening.
Tanyaradzwa Rodgers NGARA ; Houjin ZHANG
Genomics, Proteomics & Bioinformatics 2018;16(6):405-415
Metagenomes from uncultured microorganisms are rich resources for novel enzyme genes. The methods used to screen the metagenomic libraries fall into two categories, which are based on sequence or function of the enzymes. The sequence-based approaches rely on the known sequences of the target gene families. In contrast, the function-based approaches do not involve the incorporation of metagenomic sequencing data and, therefore, may lead to the discovery of novel gene sequences with desired functions. In this review, we discuss the function-based screening strategies that have been used in the identification of enzymes from metagenomes. Because of its simplicity, agar plate screening is most commonly used in the identification of novel enzymes with diverse functions. Other screening methods with higher sensitivity are also employed, such as microtiter plate screening. Furthermore, several ultra-high-throughput methods were developed to deal with large metagenomic libraries. Among these are the FACS-based screening, droplet-based screening, and the in vivo reporter-based screening methods. The application of these novel screening strategies has increased the chance for the discovery of novel enzyme genes.
Animals
;
Bacteria
;
enzymology
;
Enzymes
;
genetics
;
Gene Library
;
High-Throughput Screening Assays
;
methods
;
Metagenome
;
genetics
;
Metagenomics
;
methods
;
Plants
;
enzymology
6.Moutan Cortex Radicis inhibits the nigrostriatal damage in a 6-OHDA-induced Parkinson's disease model.
Yeong-Gon CHOI ; Yeon-Mi HONG ; Li-Hua KIM ; Sujung YEO ; Sabina LIM
Chinese Journal of Natural Medicines (English Ed.) 2018;16(7):490-498
The traditionally used oriental herbal medicine Moutan Cortex Radicis [MCR; Paeonia Suffruticosa Andrews (Paeoniaceae)] exerts anti-inflammatory, anti-spasmodic, and analgesic effects. In the present study, we investigated the therapeutic effects of differently fractioned MCR extracts in a 6-hydroxydopamine (OHDA)-induced Parkinson's disease model and neuro-blastoma B65 cells. Ethanol-extracted MCR was fractionated by n-hexane, butanol, and distilled water. Adult Sprague-Dawley rats were treated first with 20 μg of 6-OHDA, followed by three MCR extract fractions (100 or 200 mg·kg) for 14 consecutive days. In the behavioral rotation experiment, the MCR extract-treated groups showed significantly decreased number of net turns compared with the 6-OHDA control group. The three fractions also significantly inhibited the reduction in tyrosine hydroxylase-positive cells in the substantia nigra pars compacta following 6-OHDA neurotoxicity. Western blotting analysis revealed significantly reduced tyrosine hydroxylase expression in the substantia nigra pars compacta in the 6-OHDA-treated group, which was significantly inhibited by the n-hexane or distilled water fractions of MCR. B65 cells were exposed to the extract fractions for 24 h prior to addition of 6-OHDA for 30 min; treatment with n-hexane or distilled water fractions of MCR reduced apoptotic cell death induced by 6-OHDA neurotoxicity and inhibited nitric oxide production and neuronal nitric oxide synthase expression. These results showed that n-hexane- and distilled water-fractioned MCR extracts inhibited 6-OHDA-induced neurotoxicity by suppressing nitric oxide production and neuronal nitric oxide synthase activity, suggesting that MCR extracts could serve as a novel candidate treatment for the patients with Parkinson's disease.
Animals
;
Anti-Inflammatory Agents
;
pharmacology
;
therapeutic use
;
Antiparkinson Agents
;
pharmacology
;
therapeutic use
;
Cell Death
;
drug effects
;
Cell Line
;
Disease Models, Animal
;
Drugs, Chinese Herbal
;
chemistry
;
Neurons
;
pathology
;
Nitric Oxide
;
analysis
;
Nitric Oxide Synthase Type I
;
biosynthesis
;
Oxidopamine
;
toxicity
;
Paeonia
;
chemistry
;
Parkinsonian Disorders
;
chemically induced
;
drug therapy
;
Phytotherapy
;
Plant Extracts
;
pharmacology
;
therapeutic use
;
Plants, Medicinal
;
Rats
;
Rats, Sprague-Dawley
;
Substantia Nigra
;
drug effects
;
enzymology
;
Tyrosine 3-Monooxygenase
;
genetics
;
metabolism
7.HPPR encodes the hydroxyphenylpyruvate reductase required for the biosynthesis of hydrophilic phenolic acids in Salvia miltiorrhiza.
Guo-Quan WANG ; Jun-Feng CHEN ; Bo YI ; He-Xin TAN ; Lei ZHANG ; Wan-Sheng CHEN
Chinese Journal of Natural Medicines (English Ed.) 2017;15(12):917-927
Salvia miltiorrhiza is a medicinal plant widely used in the treatment of cardiovascular and cerebrovascular diseases. Hydrophilic phenolic acids, including rosmarinic acid (RA) and lithospermic acid B (LAB), are its primary medicinal ingredients. However, the biosynthetic pathway of RA and LAB in S. miltiorrhiza is still poorly understood. In the present study, we accomplished the isolation and characterization of a novel S. miltiorrhiza Hydroxyphenylpyruvate reductase (HPPR) gene, SmHPPR, which plays an important role in the biosynthesis of RA. SmHPPR contained a putative catalytic domain and a NAD(P)H-binding motif. The recombinant SmHPPR enzyme exhibited high HPPR activity, converting 4-hydroxyphenylpyruvic acid (pHPP) to 4-hydroxyphenyllactic acid (pHPL), and exhibited the highest affinity for substrate 4-hydroxyphenylpyruvate. SmHPPR expression could be induced by various treatments, including SA, GA, MeJA and Ag, and the changes in SmHPPR activity were correlated well with hydrophilic phenolic acid accumulation. SmHPPR was localized in cytoplasm, most likely close to the cytosolic NADPH-dependent hydroxypyruvate reductase active in photorespiration. In addition, the transgenic S. miltiorrhiza hairy roots overexpressing SmHPPR exhibited up to 10-fold increases in the products of hydrophilic phenolic acid pathway. In conclusion, our findings provide a new insight into the synthesis of active pharmaceutical compounds at molecular level.
Amino Acid Sequence
;
Benzofurans
;
Biosynthetic Pathways
;
genetics
;
Cinnamates
;
Depsides
;
Gene Expression Regulation, Plant
;
genetics
;
Oxidoreductases
;
genetics
;
Phenylpropionates
;
metabolism
;
Phenylpyruvic Acids
;
metabolism
;
Phylogeny
;
Plant Proteins
;
genetics
;
metabolism
;
Plant Roots
;
chemistry
;
enzymology
;
genetics
;
metabolism
;
Plants, Genetically Modified
;
Recombinant Proteins
;
analysis
;
biosynthesis
;
Salvia miltiorrhiza
;
chemistry
;
enzymology
;
genetics
;
metabolism
;
Sequence Alignment
8.Progress and application prospects of glutamine synthase in plants.
Wanjun FENG ; Guofang XING ; Xulong NIU ; Chen DOU ; Yuanhuai HAN
Chinese Journal of Biotechnology 2015;31(9):1301-1312
Nitrogen is one of the most important nutrient elements for plants and a major limiting factor in plant growth and crop productivity. Glutamine synthase (GS) is a key enzyme involved in the nitrogen assimilation and recycling in plants. So far, members of the glutamine synthase gene family have been characterized in many plants such as Arabidopsis, rice, wheat, and maize. Reports show that GS are involved in the growth and development of plants, in particular its role in seed production. However, the outcome has generally been inconsistent, which are probably derived from the transcriptional and post-translational regulation of GS genes. In this review, we outlined studies on GS gene classification, QTL mapping, the relationship between GS genes and plant growth with nitrogen and the distribution characters, the biological functions of GS genes, as well as expression control at different regulation levels. In addition, we summarized the application prospects of glutamine synthetase genes in enhancing plant growth and yield by improving the nitrogen use efficiency. The prospects were presented on the improvement of nitrogen utility efficiency in crops and plant nitrogen status diagnosis on the basis of glutamine synthase gene regulation.
Arabidopsis
;
Genes, Plant
;
Glutamate-Ammonia Ligase
;
genetics
;
Nitrogen
;
metabolism
;
Oryza
;
Plants
;
enzymology
;
genetics
;
Triticum
;
Zea mays
9.A Case of Lead Poisoning with Drug-induced Liver Injury after Ingestion of Herbal Medicine.
Gi Jung JEON ; Jongha PARK ; Min Sung KIM ; Jong Won YU ; Jae Hyun PARK ; Min Sik KIM
The Korean Journal of Gastroenterology 2015;65(6):375-378
A 61-year-old male patient was admitted because of unexplained abdominal pain and anemia. His past medical history was unremarkable except for having taken herbal medicine to treat facial palsy two months ago. The result of health examination performed about a month ago showed increased serum aspartate and alanine aminotransferase level, and he was diagnosed with toxic hepatitis by herbal medicine. When the patient presented to the outpatient department three weeks ago, follow-up liver function test results showed improvement but he complained of abdominal pain. Despite extensive blood chemistry tests and computed tomography, the cause of pain could not be found. After much deliberation, serum lead level and herbal medicines analysis was performed based on the fact that he took herbal medicine two months ago, and he could finally be diagnosed with lead poisoning. Since the serum lead level was high enough to be indicated for lead chelating therapy, conservative management was given. When a patient with toxic hepatitis due to herbal medication presents with abdominal pain, the possibility of lead poisoning should always be taken into consideration.
Acute Disease
;
Alanine Transaminase/analysis
;
Aspartate Aminotransferases/analysis
;
Chemical and Drug Induced Liver Injury/*diagnosis
;
Hemoglobins/analysis
;
Humans
;
Lead/analysis
;
*Lead Poisoning
;
Liver/enzymology/metabolism
;
Liver Function Tests
;
Male
;
Middle Aged
;
Plants, Medicinal/chemistry
10.Molecular characterization of a HMG-CoA reductase gene from a rare and endangered medicinal plant, Dendrobium officinale.
Lin ZHANG ; Ji-Tao WANG ; Da-Wei ZHANG ; Gang ZHANG ; Shun-Xing GUO
Acta Pharmaceutica Sinica 2014;49(3):411-418
The 3-hydroxy-3-methylglutaryl-CoA reductase (HMGR) catalyzes the conversion of HMG-CoA to mevalonate in mavalonic acid pathway, which is the first committed step for isoprenoid biosynthesis in plants. However, it still remains unclear whether HGMR gene plays a role in the isoprenoid biosynthesis in Dendrobium officinale, an endangered epiphytic orchid species. In the present study, a HMGR encoding gene, designed as DoHMGR1 (GenBank accession JX272632), was identified from D. officinale using the reverse transcription polymerase chain reaction (RT-PCR) and rapid amplification of cDNA ends (RACE) methods, for the first time. The full length cDNA of DoHMGR1 was 2 071 bp in length and encoded a 562-aa protein with a molecular weight of 59.73 kD and an isoelectric point (pI) of 6.18. The deduced DoHMGR1 protein, like other HMGR proteins, constituted four conserved domains (63-561, 147-551, 268-383 and 124-541) and two transmembrane motifs (42-64 and 85-107). Multiple sequence alignment and phylogenetic analyses demonstrated that DoHMGR1 had high identity (67%-89%) to a number of HMGR genes from various plants and was closely related to Vanda hybrid cultivar, rice and maize monocots. Real time quantitative PCR (qPCR) analysis revealed that DoHMGR1 was expressed in the three included organs. The transcripts were the most abundant in the roots with 2.13 fold over that in the leaves, followed by that in the stems with 1.98 fold. Molecular characterization of DoHMGR1 will be useful for further functional elucidation of the gene involving in isoprenoid biosynthesis pathway in D. officinale.
Base Sequence
;
Cloning, Molecular
;
DNA, Complementary
;
genetics
;
Dendrobium
;
enzymology
;
genetics
;
Gene Expression Regulation, Plant
;
Hydroxymethylglutaryl CoA Reductases
;
genetics
;
metabolism
;
Molecular Weight
;
Phylogeny
;
Plant Leaves
;
enzymology
;
genetics
;
Plant Roots
;
enzymology
;
genetics
;
Plant Stems
;
enzymology
;
genetics
;
Plants, Medicinal
;
enzymology
;
genetics
;
Sequence Alignment
;
Sequence Homology, Amino Acid

Result Analysis
Print
Save
E-mail