2.Mitochondrial pyruvate carrier deficiency: 3 cases report and literature review.
Hua Fang JIANG ; Fang FANG ; Zhi Mei LIU ; Chao Long XU ; PeiQing ZHAO ; Xiao Ling FU
Chinese Journal of Pediatrics 2023;61(11):995-1000
Objective: To analyze the clinical and genetic features of patients with mitochondrial pyruvate carrier deficiency (MPYCD). Methods: This was a case series research. The clinical data, genetic characteristics, and glutamine treatment efficacy of 3 patients diagnosed with MPYCD at the Department of Neurology, Beijing Children's Hospital, Capital Medical University and Department of Pediatrics, Guizhou Provincial People's Hospital, from August 2019 to June 2023 were retrospectively collected. A literature search with "MPC1 gene" "MPC2 gene and" "mitochondrial pyruvate carrier deficiency" as keywords was conducted at the Wanfang Data Knowledge Service Platform, China National Knowledge Infrastructure (CNKI) and PubMed (up to June 2023). Clinical and genetic characteristics of patients with MPYCD were summarized. Results: Case 1 was a 3 years and 11 months old boy, while case 2 was a 4 years and 10 months old boy and case 3 was an 8 years and 9 months old girl. Case 2 and case 3 were siblings from one consanguineous family. All 3 patients presented with general developmental delay, growth failure and elevated serum lactate. Cranial magnetic resonance imaging (MRI) showed subtle bilateral symmetrical T2 signal hyperintensity in basal ganglia and thalamus in case 1, but normal in case 2 and 3. Trio-WES revealed case 1 harboring compound heterozygous missense variants c.208G>A (p.Ala70Thr) and c.290G>A (p.Arg97Gln) in MPC1 gene, while case 2 and 3 revealed a homozygous variant c.290G>A (p.Arg97Gln) in the same gene. All 3 cases were diagnosecl as MPYCD. Clinical symptoms including motor ability, cognition and activity endurance were improved in these 3 patients after taking glutamine for 2 years. A total of 5 articles published in English were reviewed, and no Chinese literature was found. Including these 3 cases, 15 cases were enrolled for analysis. Eleven patients carried MPC1 gene variants and 4 cases carried MPC2 gene variants. Except for 3 cases died during prenatal period, 9 of 12 enrolled born cases were onset before 6 months old. The most common clinical symptoms were mental and motor general developmental delay, microcephaly, growth failure and hypotonia. All patients had elevated blood lactate and pyruvate, but the ratio of lactate/pyruvate was normal. Seven patients performed cranial MRI, 3 exhibited non-specific changes, 2 showed bilateral symmetrical T2 signal hyperintensity in basal ganglia and thalamus, and 3 were normal. A total of 5 MPC1 gene missense variants and 2 MPC2 gene variants were identified in 15 cases. Conclusions: Onset age of patients with MPYCD is usually within 6 months. The main clinical characteristics are developmental delay, microcephaly and growth failure, accompanied by increased serum lactate and pyruvate. Glutamine supplement could lead to clinical improvements.
Child
;
Female
;
Humans
;
Male
;
Glutamine
;
Lactates
;
Microcephaly
;
Monocarboxylic Acid Transporters
;
Pyruvates
;
Retrospective Studies
;
Child, Preschool
3.Analysis of SLC25A13 gene variants in 16 infants with intrahepatic cholestasis caused by citrin protein deficiency.
Wenwen LIU ; Xin MA ; Meijuan WANG ; Huijuan NING ; Xuemei ZHONG
Chinese Journal of Medical Genetics 2022;39(2):139-142
OBJECTIVE:
To explore the characteristics of SLC25A13 gene variants in 16 infants with neonatal intrahepatic cholestasis caused by citrin deficiency (NICCD).
METHODS:
The infants were subjected to high-throughput DNA sequencing for coding exons and flanking regions of the target genes. Suspected variants were verified by Sanger sequencing and bioinformatic analysis.
RESULTS:
Among the 16 NICCD cases, 15 were found to harbor pathogenic variants. Among these, IVS14-9A>G, c.1640G>A, c.762T>A, c.736delG, c.1098Tdel and c.851G>A were previously unreported.
CONCLUSION
Six novel SLC25A13 variants were found by high-throughput sequencing, which has enriched the spectrum of SLC25A13 gene variants and provided a basis for genetic counseling and prenatal diagnosis.
Calcium-Binding Proteins/genetics*
;
Cholestasis, Intrahepatic/genetics*
;
Citrullinemia/genetics*
;
Humans
;
Infant
;
Infant, Newborn
;
Mitochondrial Membrane Transport Proteins/genetics*
;
Mutation
;
Organic Anion Transporters/genetics*
;
Protein Deficiency
4.Association of periconceptional folate supplements and FOLR1 and FOLR2 gene polymorphisms with risk of congenital heart disease in offspring: A hospital-based case-control study.
Xinli SONG ; Peng HUANG ; Tingting WANG ; Senmao ZHANG ; Letao CHEN ; Jiabi QIN
Journal of Central South University(Medical Sciences) 2022;47(1):52-62
OBJECTIVES:
Maternal periconceptional folic acid supplement is by far the most effective primary prevention strategy to reduce the incidence of congenital heart disease (CHD) in offspring. It was revealed that the underlying mechanisms are complex, including a combination of genetic and environmental factors. The purpose of this study is to investigate the association between periconceptional folic acid supplement, the genetic polymorphisms of maternal folic acid receptor 1 gene (FOLR1) and folic acid receptor 2 gene (FOLR2) and the impact of their interaction on the risk of CHD in offspring, and to provide epidemiological evidence for individualized folic acid dosing in hygienic counseling.
METHODS:
A case-control study on 569 mothers of CHD infants and 652 mothers of health controls was performed. The interesting points were periconceptional folate supplements, single nucleotide polymorphisms (SNPs) of maternal FOLR1 gene and FOLR2 gene.
RESULTS:
Mothers who took folate in the periconceptional period were observed a decreased risk of CHD [adjusted odds ratio (aOR)=0.58, 95% CI 0.35 to 0.95]. Our study also found that polymorphisms of maternal FOLR1 gene at rs2071010 (G/A vs G/G: aOR=0.67, 95% CI 0.47 to 0.96) and FOLR2 gene at rs514933 (T/C vs T/T: aOR=0.60, 95% CI 0.43 to 0.84; C/C vs T/T: aOR=0.55, 95% CI 0.33 to 0.90; the dominant model: T/C+ C/C vs T/T: aOR=0.59, 95% CI 0.43 to 0.81; and the addictive model: C/C vs T/C vs T/T: aOR=0.70, 95% CI 0.56 to 0.88) were significantly associated with lower risk of CHD [all P<0.05, false discovery rate P value (FDR_P)<0.1]. Besides, significant interaction between periconceptional folate supplements and rs2071010 G→A (aOR=0.59, 95% CI 0.41-0.86) and rs514933 T→C (aOR=0.52, 95% CI 0.37 to 0.74) on CHD risk were observed (all P<0.05, FDR_P<0.1).
CONCLUSIONS
Periconceptional folate supplements, polymorphisms of FOLR1 gene and FOLR2 gene and their interactions are significantly associated with risk of CHD. However, more studies in different ethnic populations with a larger sample and prospective designs are required to confirm our findings.
Case-Control Studies
;
Dietary Supplements
;
Female
;
Folate Receptor 1/genetics*
;
Folate Receptor 2/genetics*
;
Folic Acid/administration & dosage*
;
Heart Defects, Congenital/genetics*
;
Hospitals
;
Humans
;
Infant
;
Polymorphism, Single Nucleotide
;
Prospective Studies
;
Risk Factors
5.Influence of 6-shogaol potentiated on 5-fluorouracil treatment of liver cancer by promoting apoptosis and cell cycle arrest by regulating AKT/mTOR/MRP1 signalling.
Yi ZHANG ; Yong QU ; Yun-Zhong CHEN
Chinese Journal of Natural Medicines (English Ed.) 2022;20(5):352-363
Currently, chemoresistance seriously attenuates the curative outcome of liver cancer. The purpose of our work was to investigate the influence of 6-shogaol on the inhibition of 5-fluorouracil (5-FU) in liver cancer. The cell viability of cancer cells was determined by MTT assay. Liver cancer cell apoptosis and the cell cycle were examined utilizing flow cytometry. Moreover, qRT-PCR and western blotting was used to analyse the mRNA and protein expression levels, respectively. Immunohistochemistry assays were used to examine multidrug resistance protein 1 (MRP1) expression in tumour tissues. In liver cancer cells, we found that 6-shogaol-5-FU combination treatment inhibited cell viability, facilitated G0/G1 cell cycle arrest, and accelerated apoptosis compared with 6-shogaol or 5-FU treatment alone. In cancer cells cotreated with 6-shogaol and 5-FU, AKT/mTOR pathway- and cell cycle-related protein expression levels were inhibited, and MRP1 expression was downregulated. AKT activation or MRP1 increase reversed the influence of combination treatment on liver cancer cell viability, apoptosis and cell cycle arrest. The inhibition of AKT activation to the anticancer effect of 6-shogaol-5-FU could be reversed by MRP1 silencing. Moreover, our results showed that 6-shogaol-5-FU combination treatment notably inhibited tumour growth in vivo. In summary, our data demonstrated that 6-shogaol contributed to the curative outcome of 5-FU in liver cancer by inhibiting the AKT/mTOR/MRP1 signalling pathway.
ATP Binding Cassette Transporter, Subfamily B, Member 1
;
Apoptosis
;
Catechols
;
Cell Cycle
;
Cell Cycle Checkpoints
;
Cell Line, Tumor
;
Cell Proliferation
;
Drug Resistance, Neoplasm
;
Fluorouracil/pharmacology*
;
Humans
;
Liver Neoplasms/genetics*
;
Multidrug Resistance-Associated Proteins
;
Proto-Oncogene Proteins c-akt/metabolism*
;
TOR Serine-Threonine Kinases/metabolism*
6.Genetic analysis of a case with Dubin-Johnson syndrome due to two novel variants of ABCC2 gene.
Ganye ZHAO ; Xuechao ZHAO ; Li'na LIU ; Conghui WANG ; Qianqian LI ; Xiangdong KONG
Chinese Journal of Medical Genetics 2022;39(9):974-978
OBJECTIVE:
To explore the genetic etiology and differential diagnosis for a patient with jaundice.
METHODS:
Clinical data of the patient and his parents were collected. Genes associated with metabolic liver diseases were subjected to high-throughput sequencing. The pathogenicity of the candidate variants was predicted by using bioinformatics software.
RESULTS:
High-throughput sequencing revealed that the proband has harbored two variants of the ABCC2 gene (NM_000392) including c.3011C>T (p.T1004I) and c.3541C>T (p.R1181X), which were respectively inherited from his father and mother. Both variants have been previously unreported and predicted to be pathogenic by bioinformatics analysis.
CONCLUSION
The proband was diagnosed with Dubin-Johnson syndrome due to the compound heterozygous variants of the ABCC2 gene. Genetic testing has enabled accurate differential diagnosis of Dubin-Johnson syndrome in this patient.
Genetic Testing
;
High-Throughput Nucleotide Sequencing
;
Humans
;
Jaundice, Chronic Idiopathic/pathology*
;
Multidrug Resistance-Associated Protein 2
;
Multidrug Resistance-Associated Proteins/genetics*
;
Mutation
7.The phenotypes and genotypes of four patients with Dubin-Johnson syndrome.
Qinghua WU ; Beibei MA ; Saisai YANG ; Zhihui JIAO ; Xin CHEN ; Shumin REN ; Yibing CHEN ; Huirong SHI ; Xiangdong KONG
Chinese Journal of Medical Genetics 2022;39(10):1065-1069
OBJECTIVE:
To explore the genetic etiology in four patients with hyperbilirubinemia, and discuss the correlation between clinical characteristics and molecular basis.
METHODS:
The data of clinical manifestation and auxiliary examinations were collected. Genomic DNA of the four patients was extracted and analyzed by next-generation sequencing using the panel including genes involved in hereditary metabolic liver diseases. Suspected variants were verified by Sanger sequencing.
RESULTS:
All of the four patients were males with normal liver enzymes. It was revealed that all the patients had heterozygous variants, among which c.3011C>T, c.2443C>T and c.2556del were the variants which have not been reported previously.
CONCLUSION
All of the patients were diagnosed as Dubin-Johnson syndrome (DJS) caused by ABCC2 gene variants. The novel variants add to the spectrum of genetic variants of the disease. Because of the favorite prognosis, precise diagnosis can greatly reduce the psychological pressure of patients and avoid excessive treatments. At the same time, it could provide pertinent genetic counseling for the families.
DNA
;
Female
;
Heterozygote
;
Humans
;
Jaundice, Chronic Idiopathic/genetics*
;
Male
;
Multidrug Resistance-Associated Protein 2
;
Multidrug Resistance-Associated Proteins/genetics*
;
Phenotype
8.Association between maternal reduced folate carrier gene polymorphisms and congenital heart disease in offspring: a case-control study.
Jia-Bi QIN ; Xiao-Qi SHENG ; Ting-Ting WANG ; Peng HUANG ; Yi-Huan LI ; Liu LUO ; Yi-Ping LIU ; Jing-Yi DIAO ; Ping ZHU
Chinese Journal of Contemporary Pediatrics 2021;23(6):547-554
OBJECTIVE:
To study the association between maternal reduced folate carrier (
METHODS:
A hospital-based case-control study was conducted. The mothers of 683 infants with CHD who attended the Department of Cardiothoracic Surgery, Hunan Children's Hospital, from November 2017 to March 2020 were enrolled as the case group. The mothers of 740 healthy infants without any deformity who attended the hospital during the same period of time were enrolled as the control group. A questionnaire survey was performed to collect the exposure data of subjects. Venous blood samples of 5 mL were collected from the mothers for genetic polymorphism detection. A multivariate logistic regression analysis was used to evaluate the association of
RESULTS:
After control for confounding factors, the multivariate logistic regression analysis showed that maternal
CONCLUSIONS
Maternal
Case-Control Studies
;
Child
;
Female
;
Genetic Predisposition to Disease
;
Genotype
;
Heart Defects, Congenital/genetics*
;
Humans
;
Infant
;
Polymorphism, Single Nucleotide
;
Reduced Folate Carrier Protein/genetics*
;
Risk Factors
9.Liver Tissue-specific Genes IGFALS,CYP3A4,SLC22A1 and CYP2E1 May be Associated with Poor Prognosis of Liver Cancer.
Yan-Yan ZHANG ; Jing CAO ; Xiao-Tong CHEN ; Jun-Hui CHEN ; Yu-Bao ZHENG
Acta Academiae Medicinae Sinicae 2021;43(3):371-381
Objective To explore the function and mechanism of related genes in the occurrence and development of liver cancer, and the possibility of key genes as potential biomarkers and prognostic indicators for the treatment of liver cancer.Methods We selected 4 datasets(GSE57957, GSE121248, GSE36376 and GSE14520)from the GEO database.With
Biomarkers, Tumor/genetics*
;
Carrier Proteins
;
Computational Biology
;
Cytochrome P-450 CYP2E1
;
Cytochrome P-450 CYP3A
;
Gene Expression Profiling
;
Gene Expression Regulation, Neoplastic
;
Gene Regulatory Networks
;
Glycoproteins
;
Humans
;
Liver Neoplasms/genetics*
;
Prognosis
;
Protein Interaction Maps
10.New deafness gene: Progress of research on ABCC1 in biological barriers.
Shuai ZHANG ; Jie LING ; Meng LI ; Lingyun MEI
Chinese Journal of Medical Genetics 2021;38(9):907-911
ABCC1 gene is expressed in various tissues and organs of the human body, and can transport substrates including drugs, heavy metals, toxic substances and organic anions. Previous research on ABCC1 gene has mostly focused on tumor multidrug resistance. Recently, ABCC1 has been proposed as a candidate gene for hereditary hearing impairment, which has attracted much attention. ABCC1-associated deafness may be related to its role in biological barriers. This article has summarized recent progress in the study of the role of ABCC1 in the blood-testis barrier, placental barrier, blood-brain barrier, blood-labyrinth barrier, which may provide insight into its biological functions.
Biological Transport
;
Deafness/genetics*
;
Female
;
Humans
;
Male
;
Multidrug Resistance-Associated Proteins/genetics*
;
Placenta
;
Pregnancy

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