1.Role and mechanisms of histone methylation in osteogenic/odontogenic differentiation of dental mesenchymal stem cells.
International Journal of Oral Science 2025;17(1):24-24
Dental mesenchymal stem cells (DMSCs) are pivotal for tooth development and periodontal tissue health and play an important role in tissue engineering and regenerative medicine because of their multidirectional differentiation potential and self-renewal ability. The cellular microenvironment regulates the fate of stem cells and can be modified using various optimization techniques. These methods can influence the cellular microenvironment, activate disparate signaling pathways, and induce different biological effects. "Epigenetic regulation" refers to the process of influencing gene expression and regulating cell fate without altering DNA sequences, such as histone methylation. Histone methylation modifications regulate pivotal transcription factors governing DMSCs differentiation into osteo-/odontogenic lineages. The most important sites of histone methylation in tooth organization were found to be H3K4, H3K9, and H3K27. Histone methylation affects gene expression and regulates stem cell differentiation by maintaining a delicate balance between major trimethylation sites, generating distinct chromatin structures associated with specific downstream transcriptional states. Several crucial signaling pathways associated with osteogenic differentiation are susceptible to modulation via histone methylation modifications. A deeper understanding of the regulatory mechanisms governing histone methylation modifications in osteo-/odontogenic differentiation and immune-inflammatory responses of DMSCs will facilitate further investigation of the epigenetic regulation of histone methylation in DMSC-mediated tissue regeneration and inflammation. Here is a concise overview of the pivotal functions of epigenetic histone methylation at H3K4, H3K9, and H3K27 in the regulation of osteo-/odontogenic differentiation and renewal of DMSCs in both non-inflammatory and inflammatory microenvironments. This review summarizes the current research on these processes in the context of tissue regeneration and therapeutic interventions.
Mesenchymal Stem Cells/physiology*
;
Humans
;
Osteogenesis/genetics*
;
Histones/metabolism*
;
Cell Differentiation/physiology*
;
Methylation
;
Odontogenesis/genetics*
;
Epigenesis, Genetic
2.Profiling and functional characterization of long noncoding RNAs during human tooth development.
Xiuge GU ; Wei WEI ; Chuan WU ; Jing SUN ; Xiaoshan WU ; Zongshan SHEN ; Hanzhang ZHOU ; Chunmei ZHANG ; Jinsong WANG ; Lei HU ; Suwen CHEN ; Yuanyuan ZHANG ; Songlin WANG ; Ran ZHANG
International Journal of Oral Science 2025;17(1):38-38
The regulatory processes in developmental biology research are significantly influenced by long non-coding RNAs (lncRNAs). However, the dynamics of lncRNA expression during human tooth development remain poorly understood. In this research, we examined the lncRNAs present in the dental epithelium (DE) and dental mesenchyme (DM) at the late bud, cap, and early bell stages of human fetal tooth development through bulk RNA sequencing. Developmental regulators co-expressed with neighboring lncRNAs were significantly enriched in odontogenesis. Specific lncRNAs expressed in the DE and DM, such as PANCR, MIR205HG, DLX6-AS1, and DNM3OS, were identified through a combination of bulk RNA sequencing and single-cell analysis. Further subcluster analysis revealed lncRNAs specifically expressed in important regions of the tooth germ, such as the inner enamel epithelium and coronal dental papilla (CDP). Functionally, we demonstrated that CDP-specific DLX6-AS1 enhanced odontoblastic differentiation in human tooth germ mesenchymal cells and dental pulp stem cells. These findings suggest that lncRNAs could serve as valuable cell markers for tooth development and potential therapeutic targets for tooth regeneration.
Humans
;
RNA, Long Noncoding/metabolism*
;
Odontogenesis/genetics*
;
Tooth Germ/embryology*
;
Cell Differentiation
;
Gene Expression Regulation, Developmental
;
Mesoderm/metabolism*
;
Tooth/embryology*
;
Gene Expression Profiling
;
Sequence Analysis, RNA
;
Dental Pulp/cytology*
3.Prespecified dental mesenchymal cells for the making of a tooth.
Eun-Jung KIM ; Hyun-Yi KIM ; Suyeon LEE ; Junsu KIM ; Shujin LI ; Anish Ashok ADPAIKAR ; Thantrira PORNTAVEETUS ; Senthil Kumar BASKARAN ; Jong-Min LEE ; Han-Sung JUNG
International Journal of Oral Science 2025;17(1):67-67
Positional information plays a crucial role in embryonic pattern formation, yet its role in tooth development remains unexplored. In this study, we investigated the regional specification of lingual and buccal dental mesenchyme during tooth development. Tooth germs at the cap stage were dissected from mouse mandibles, and their lingual and buccal mesenchymal regions were separated for bulk RNA sequencing. Gene ontology analysis revealed that odontogenesis, pattern specification, and proliferation-related genes were enriched in the lingual mesenchyme, whereas stem cell development, mesenchymal differentiation, neural crest differentiation, and regeneration-related genes were predominant in the buccal mesenchyme. Reaggregation experiments using Wnt1creERT/+; R26RtdT/+ and WT mouse models demonstrated that lingual mesenchyme contributes to tooth formation, while buccal mesenchyme primarily supports surrounding tissues. Furthermore, only the lingual part of tooth germs exhibited odontogenic potential when cultured in vitro and transplanted under the kidney capsule. Bulk RNA transcriptomic analysis further validated the regional specification of the lingual and buccal mesenchyme. These findings provide novel insights into the molecular basis of positional information in tooth development and pattern formation.
Animals
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Mice
;
Odontogenesis/genetics*
;
Tooth Germ/cytology*
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Mesoderm/cytology*
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Cell Differentiation
;
Mesenchymal Stem Cells
;
Tooth/embryology*
4.Knockout fth1b affects early mineralization of zebrafish pharyngeal teeth.
Chun-Yan ZHOU ; Xue-Dan ZHENG ; De-Qin YANG
West China Journal of Stomatology 2021;39(1):32-37
OBJECTIVES:
A study was conducted to explore the expression pattern and function of ferritin heavy polypeptide gene (fth1b) in zebrafish pharyngeal teeth development and lay the foundation for subsequent research on teeth development and mineralization.
METHODS:
The zebrafish embryos were harvested at 56, 72, 96, and 120 h after fertilization. The expression of fth1b in zebrafish pharyngeal teeth development was detected by whole embryo
RESULTS:
The expression pattern of fth1b gene was very similar to that of the known zebrafish pharyngeal teeth marker dlx2b and was specifically expressed in the zebrafish pharyngeal teeth during development. After the specific knockout of the gene fth1b, the earliest gene that can be detect in zebrafish pharyngeal teeth-pitx2 was expressed normally during early development. The dlx2b expression was not significantly different from that of wild type zebrafish, but the mineralization of pharyngeal teeth in the mutant was weaker than that of wild type zebrafish.
CONCLUSIONS
The gene fth1b is specifically expressed in zebrafish pharyngeal teeth and acts on their early mineralization.
Animals
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In Situ Hybridization
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Odontogenesis
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Pharynx
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Tooth
;
Zebrafish/genetics*
5.Retinoic acid signal pathway regulation of zebra fish tooth development through manipulation of the differentiation of neural crest.
Xin LIU ; Xing HUANG ; Zhiyun XU ; Deqin YANG
West China Journal of Stomatology 2016;34(2):115-120
OBJECTIVETo investigate the mechanism of retinoic acid (RA) signal in dental evolution, RA is used to explore the influence of the mechanism on neural crest's migration during the early stage of zebra fish embryos.
METHODSWe divided embryos of wild type and transgenic line zebra fish into three groups. 1 x 10(-7) to 6 x 10(-7) mol x L(-1) RA and 1 x 10(-7) mo x L(-1) 4-diethylaminobenzaldehyde (DEAB) were added into egg water at 24 hpf for 9 h. Dimethyl sulfoxid (DMSO) with the concentration was used as control group. Then, antisense probes of dlx2a, dlx2b, and barxl were formulated to perform whole-mount in situ hybridization to check the expressions of the genes in 48 hpf to 72 hpf embryos. We observed fluorescence of transgenic line in 4 dpf embryos.
RESULTSWe obtained three mRNA probes successfully. Compared with DMSO control group, a low concentration (1 x 10(-7) mol x L(-1)) of RA could up-regulate the expression of mRNA (barx1, dlx2a) in neural crest. Obvious migration trend was observed toward the pharyngeal arch in which teeth adhered. Transgenic fish had spreading fluorescence tendency in pharyngeal arch. However, a high concentration (4 x 10(-7) mol x L(-1)) of RA malformed the embryos and killed them after treatment. One third of the embryos of middle concentration (3 x 10(-7) mo x L(-1)) exhibited delayed development. DEAB resulted in neural crest dysplasia. The expression of barxl and dlx2a were suppressed, and the appearance of dlx2b in tooth was delayed.
CONCLUSIONRA signal pathway can regulate the progenitors of tooth by controlling the growth of the neural crest and manipulating tooth development
Animals ; Branchial Region ; Cell Differentiation ; drug effects ; Embryo, Nonmammalian ; drug effects ; embryology ; metabolism ; In Situ Hybridization ; Neural Crest ; drug effects ; Odontogenesis ; Signal Transduction ; Tooth ; drug effects ; embryology ; metabolism ; Tretinoin ; pharmacology ; Zebrafish ; embryology ; genetics ; metabolism
6.Characterization of Fam20C expression in odontogenesis and osteogenesis using transgenic mice.
Er-Xia DU ; Xiao-Fang WANG ; Wu-Chen YANG ; Deborah KABACK ; Siu-Pok YEE ; Chun-Lin QIN ; Anne GEORGE ; Jian-Jun HAO
International Journal of Oral Science 2015;7(2):89-94
Our previous studies have demonstrated that Fam20C promotes differentiation and mineralization of odontoblasts, ameloblasts, osteoblasts and osteocytes during tooth and bone development. Ablation of the Fam20C gene inhibits bone and tooth growth by increasing fibroblast growth factor 23 in serum and causing hypophosphatemia in conditional knockout mice. However, control and regulation of the expression of Fam20C are still unknown. In this study, we generated a transgenic reporter model which expresses green fluorescence protein (GFP) driven by the Fam20C promoter. Recombineering was used to insert a 16 kb fragment of the mouse Fam20C gene (containing the 15 kb promoter and 1.1 kb of exon 1) into a pBluescript SK vector with the topaz variant of GFP and a bovine growth hormone polyadenylation sequence. GFP expression was subsequently evaluated by histomorphometry on cryosections from E14 to adult mice. Fluorescence was evident in the bone and teeth as early as E17.5. The GFP signal was maintained stably in odontoblasts and osteoblasts until 4 weeks after birth. The expression of GFP was significantly reduced in teeth, alveolar bone and muscle by 8 weeks of age. We also observed colocalization of the GFP signal with the Fam20C antibody in postnatal 1- and 7-day-old animals. Successful generation of Fam20C-GFP transgenic mice will provide a unique model for studying Fam20C gene expression and the biological function of this gene during odontogenesis and osteogenesis.
Animals
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Calcium-Binding Proteins
;
genetics
;
Extracellular Matrix Proteins
;
genetics
;
Green Fluorescent Proteins
;
genetics
;
HEK293 Cells
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Humans
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Mice
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Mice, Inbred C57BL
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Mice, Transgenic
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Odontogenesis
;
genetics
;
Osteogenesis
;
genetics
7.Nucleus-targeted Dmp1 transgene fails to rescue dental defects in Dmp1 null mice.
Shu-Xian LIN ; Qi ZHANG ; Hua ZHANG ; Kevin YAN ; Leanne WARD ; Yong-Bo LU ; Jian-Quan FENG
International Journal of Oral Science 2014;6(3):133-141
Dentin matrix protein 1 (DMP1) is essential to odontogenesis. Its mutations in human subjects lead to dental problems such as dental deformities, hypomineralization and periodontal impairment. Primarily, DMP1 is considered as an extracellular matrix protein that promotes hydroxyapatite formation and activates intracellular signaling pathway via interacting with αvβ3 integrin. Recent in vitro studies suggested that DMP1 might also act as a transcription factor. In this study, we examined whether full-length DMP1 could function as a transcription factor in the nucleus and regulate odontogenesis in vivo. We first demonstrated that a patient with the DMP1 M1V mutation, which presumably causes a loss of the secretory DMP1 but does not affect the nuclear translocation of DMP1, shows a typical rachitic tooth defect. Furthermore, we generated transgenic mice expressing (NLS)DMP1, in which the endoplasmic reticulum (ER) entry signal sequence of DMP1 was replaced by a nuclear localization signal (NLS) sequence, under the control of a 3.6 kb rat type I collagen promoter plus a 1.6 kb intron 1. We then crossbred the (NLS)DMP1 transgenic mice with Dmp1 null mice to express the (NLS)DMP1 in Dmp1-deficient genetic background. Although immunohistochemistry demonstrated that (NLS)DMP1 was localized in the nuclei of the preodontoblasts and odontoblasts, the histological, morphological and biochemical analyses showed that it failed to rescue the dental and periodontal defects as well as the delayed tooth eruption in Dmp1 null mice. These data suggest that the full-length DMP1 plays no apparent role in the nucleus during odontogenesis.
Animals
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Cell Nucleus
;
genetics
;
Codon, Initiator
;
genetics
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Collagen Type I
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genetics
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Endoplasmic Reticulum
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genetics
;
Extracellular Matrix Proteins
;
genetics
;
Familial Hypophosphatemic Rickets
;
genetics
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Gene Targeting
;
methods
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Genetic Vectors
;
genetics
;
Humans
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Introns
;
genetics
;
Methionine
;
genetics
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Mice, Inbred C57BL
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Mice, Transgenic
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Mutation
;
genetics
;
Odontoblasts
;
cytology
;
Odontogenesis
;
genetics
;
Periodontal Diseases
;
genetics
;
Periodontal Ligament
;
pathology
;
Phosphoproteins
;
genetics
;
Promoter Regions, Genetic
;
genetics
;
Tooth Abnormalities
;
genetics
;
Tooth Eruption
;
genetics
;
Transcription Factors
;
genetics
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Transgenes
;
genetics
;
Valine
;
genetics
;
Young Adult
8.KDM6B epigenetically regulates odontogenic differentiation of dental mesenchymal stem cells.
Juan XU ; Bo YU ; Christine HONG ; Cun-Yu WANG
International Journal of Oral Science 2013;5(4):200-205
Mesenchymal stem cells (MSCs) have been identified and isolated from dental tissues, including stem cells from apical papilla, which demonstrated the ability to differentiate into dentin-forming odontoblasts. The histone demethylase KDM6B (also known as JMJD3) was shown to play a key role in promoting osteogenic commitment by removing epigenetic marks H3K27me3 from the promoters of osteogenic genes. Whether KDM6B is involved in odontogenic differentiation of dental MSCs, however, is not known. Here, we explored the role of KDM6B in dental MSC fate determination into the odontogenic lineage. Using shRNA-expressing lentivirus, we performed KDM6B knockdown in dental MSCs and observed that KDM6B depletion leads to a significant reduction in alkaline phosphate (ALP) activity and in formation of mineralized nodules assessed by Alizarin Red staining. Additionally, mRNA expression of odontogenic marker gene SP7 (osterix, OSX), as well as extracellular matrix genes BGLAP (osteoclacin, OCN) and SPP1 (osteopontin, OPN), was suppressed by KDM6B depletion. When KDM6B was overexpressed in KDM6B-knockdown MSCs, odontogenic differentiation was restored, further confirming the facilitating role of KDM6B in odontogenic commitment. Mechanistically, KDM6B was recruited to bone morphogenic protein 2 (BMP2) promoters and the subsequent removal of silencing H3K27me3 marks led to the activation of this odontogenic master transcription gene. Taken together, our results demonstrated the critical role of a histone demethylase in the epigenetic regulation of odontogenic differentiation of dental MSCs. KDM6B may present as a potential therapeutic target in the regeneration of tooth structures and the repair of craniofacial defects.
Alkaline Phosphatase
;
analysis
;
Bone Morphogenetic Protein 2
;
genetics
;
Bone Morphogenetic Protein 4
;
genetics
;
Calcification, Physiologic
;
genetics
;
Cell Culture Techniques
;
Cell Differentiation
;
genetics
;
Cell Lineage
;
Dental Papilla
;
cytology
;
Epigenesis, Genetic
;
genetics
;
Gene Knockdown Techniques
;
Homeodomain Proteins
;
genetics
;
Humans
;
Jumonji Domain-Containing Histone Demethylases
;
genetics
;
Mesenchymal Stromal Cells
;
physiology
;
Odontoblasts
;
physiology
;
Odontogenesis
;
genetics
;
Osteocalcin
;
analysis
;
Osteopontin
;
analysis
;
Promoter Regions, Genetic
;
genetics
;
RNA, Small Interfering
;
genetics
;
Sp7 Transcription Factor
;
Transcription Factors
;
analysis
;
genetics
;
Transcriptional Activation
;
genetics
9.Bone morphogenetic protein-2 gene controls tooth root development in coordination with formation of the periodontium.
Audrey RAKIAN ; Wu-Chen YANG ; Jelica GLUHAK-HEINRICH ; Yong CUI ; Marie A HARRIS ; Demitri VILLARREAL ; Jerry Q FENG ; Mary MACDOUGALL ; Stephen E HARRIS
International Journal of Oral Science 2013;5(2):75-84
Formation of the periodontium begins following onset of tooth-root formation in a coordinated manner after birth. Dental follicle progenitor cells are thought to form the cementum, alveolar bone and Sharpey's fibers of the periodontal ligament (PDL). However, little is known about the regulatory morphogens that control differentiation and function of these progenitor cells, as well as the progenitor cells involved in crown and root formation. We investigated the role of bone morphogenetic protein-2 (Bmp2) in these processes by the conditional removal of the Bmp2 gene using the Sp7-Cre-EGFP mouse model. Sp7-Cre-EGFP first becomes active at E18 in the first molar, with robust Cre activity at postnatal day 0 (P0), followed by Cre activity in the second molar, which occurs after P0. There is robust Cre activity in the periodontium and third molars by 2 weeks of age. When the Bmp2 gene is removed from Sp7(+) (Osterix(+)) cells, major defects are noted in root, cellular cementum and periodontium formation. First, there are major cell autonomous defects in root-odontoblast terminal differentiation. Second, there are major alterations in formation of the PDLs and cellular cementum, correlated with decreased nuclear factor IC (Nfic), periostin and α-SMA(+) cells. Third, there is a failure to produce vascular endothelial growth factor A (VEGF-A) in the periodontium and the pulp leading to decreased formation of the microvascular and associated candidate stem cells in the Bmp2-cKO(Sp7-Cre-EGFP). Fourth, ameloblast function and enamel formation are indirectly altered in the Bmp2-cKO(Sp7-Cre-EGFP). These data demonstrate that the Bmp2 gene has complex roles in postnatal tooth development and periodontium formation.
Actins
;
analysis
;
Activating Transcription Factor 2
;
genetics
;
Age Factors
;
Ameloblasts
;
pathology
;
Amelogenesis
;
genetics
;
Animals
;
Bone Morphogenetic Protein 2
;
genetics
;
Cell Adhesion Molecules
;
analysis
;
Cell Differentiation
;
genetics
;
Cementogenesis
;
genetics
;
Dental Cementum
;
pathology
;
Dental Pulp
;
blood supply
;
Fluorescent Dyes
;
Green Fluorescent Proteins
;
Male
;
Mice
;
Mice, Knockout
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Microvessels
;
pathology
;
Molar
;
growth & development
;
Molar, Third
;
growth & development
;
NFI Transcription Factors
;
analysis
;
Odontoblasts
;
pathology
;
Odontogenesis
;
genetics
;
Periodontal Ligament
;
growth & development
;
Sp7 Transcription Factor
;
Stem Cells
;
physiology
;
Tooth Root
;
growth & development
;
Transcription Factors
;
genetics
;
Vascular Endothelial Growth Factor A
;
analysis
;
Zinc Fingers
;
genetics
10.Biology of tooth replacement in amniotes.
John A WHITLOCK ; Joy M RICHMAN
International Journal of Oral Science 2013;5(2):66-70
Tooth replacement is a common trait to most vertebrates, including mammals. Mammals, however, have lost the capacity for continuous tooth renewal seen in most other vertebrates, and typically have only 1-2 generations of teeth. Here, we review the mechanisms of tooth replacement in reptiles and mammals, and discuss in detail the current and historical theories on control of timing and pattern of tooth replacement and development.
Animals
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Biology
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Humans
;
Mammals
;
physiology
;
Odontogenesis
;
genetics
;
physiology
;
Reptiles
;
physiology
;
Tooth
;
growth & development
;
Tooth Germ
;
embryology
;
Tooth, Deciduous
;
growth & development

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