2.Inhibition of Escherichia coli nitroreductase by the constituents in Syzygium aromaticum.
Lu CHEN ; Xi CHEN ; Yue BAI ; Zi-Nan ZHAO ; Yun-Feng CAO ; Li-Kun LIU ; Tao JIANG ; Jie HOU
Chinese Journal of Natural Medicines (English Ed.) 2022;20(7):506-517
Gut bacterial nitroreductases play an important role in reduction of various nitroaromatic compounds to the corresponding N-nitroso compounds, hydroxylamines or aromatic amines, most of which are carcinogenic and mutagenic agents. Inhibition of gut nitroreductases has been recognized as an attractive approach for reducing mutagen metabolites in the colon, so as to prevent colon diseases. In this study, the inhibitory effects of 55 herbal medicines against Escherichia coli(E. coli) nitroreductase (EcNfsA) were examined. Compared with other herbal extracts, Syzygium aromaticum extract showed superior inhibitory potency toward EcNfsA mediated nitrofurazone reduction. Then, the inhibitory effects of 22 major constituents in Syzygium aromaticum against EcNfsA were evaluted. Compared with other tested natural compounds, ellagic acid, corilagin, betulinic acid, oleanic acid, ursolic acid, urolithin M5 and isorhamnetin were found with strong to moderate inhibitory effect against EcNfsA, with IC50 values ranging from 0.67 to 28.98 mol·L-1. Furthermore, the inhibition kinetic analysis and docking simulation demonstrated that ellagic acid and betulinic acid potently inhibited EcNfsA (Ki < 2 μmol·L -1) in a competitively inhibitory manner, which created strong interactions with the catalytic triad of EcNfsA. In summary, our findings provide new scientific basis for explaining the anti-mutagenic activity of Syzygium aromaticum, where some newly identified EcNfsA inhibitors can be used for developing novel agents to reduce the toxicity induced by bacterial nitroreductase.
Ellagic Acid/pharmacology*
;
Escherichia coli
;
Kinetics
;
Nitroreductases/pharmacology*
;
Plant Extracts/pharmacology*
;
Syzygium
3.Identification of a new azoreductase driven prodrug from bardoxolone methyl and 5-aminosalicylate for the treatment of colitis in mice.
Xin QIAO ; Yan GONG ; Yi MOU ; Yi-Hua ZHANG ; Zhang-Jian HUANG ; Xiao-Dong WEN
Chinese Journal of Natural Medicines (English Ed.) 2021;19(7):545-550
For local treatment of ulcerative colitis, a new azoreductase driven prodrug CDDO-AZO from bardoxolone methyl (CDDO-Me) and 5-aminosalicylate (5-ASA) was designed, synthesized and biologically evaluated. It is proposed that orally administrated CDDO-AZO is stable before reaching the colon, while it can also be triggered by the presence of azoreductase in the colon to fragment into CDDO-Me and 5-ASA, generating potent anti-colitis effects. Superior to olsalazine (OLS, a clinically used drug for ulcerative colitis) and CDDO-Me plus 5-ASA, CDDO-AZO significantly attenuated inflammatory colitis symptoms in DSS-induced chronic colitis mice, which suggested that CDDO-AZO may be a promising anti-ulcerative colitis agent.
Animals
;
Colitis/drug therapy*
;
Mesalamine/pharmacology*
;
Mice
;
Nitroreductases
;
Oleanolic Acid/pharmacology*
;
Prodrugs
4.Allelopathic effects of extracts from fibrous roots of Coptis chinensis on two leguminous species.
Qian LI ; Ye-Kuan WU ; Ling YUAN ; Jian-Guo HUANG
China Journal of Chinese Materia Medica 2013;38(6):806-811
An experiment was carried out to study the allelopathic effects of Coptis chinensis fibrous root extracts (CRE) on the germination and seedling growth of Vicia faba and Pisum sativum in order to alleviate the allelopathic effects and increase land productivity. The seeds of both garden pea (P. sativum) and broad been (V. faba) were germinated in CRE solution of various concentrations, the germination rate, seedling growth and related physiological indexes were measured. The result indicated that there were no significant effects of CRE in low concentrations on seed germination, including both the rate and index, and seed vitality and membrane permeability. With the increment of CRE concentrations, however, the high seed membrane permeability and germination inhibition were observed. For example, the germination rates were reduced by 23.4% (P. sativum) and 9.5% (V. faba), respectively, in CRE solution with 800 mg . L-1. Simultaneously, soluble sugars and the free amino acids in the seeds were lower than those in the control (without CRE) after soaking seeds in CRE solutions. In addition, the seedling growth and nitrate reductase activity were stimulated by CRE at low concentrations in contrast to high concentrations which behaved otherwise and inhibited the nutrient utilization in endosperm. Therefore, the large amount of allelochemicals released from the roots and remains of C. chinensis in soils could inhibit the seed germination and seedling growth of legumes, which may lead to decrease even fail crop yields after growing this medical plant.
Amino Acids
;
metabolism
;
Cell Membrane Permeability
;
drug effects
;
Coptis
;
chemistry
;
Dose-Response Relationship, Drug
;
Germination
;
drug effects
;
Nitrate Reductase
;
metabolism
;
Peas
;
drug effects
;
metabolism
;
physiology
;
Pheromones
;
isolation & purification
;
pharmacology
;
Plant Extracts
;
isolation & purification
;
pharmacology
;
Plant Roots
;
chemistry
;
Seedlings
;
drug effects
;
growth & development
;
Vicia faba
;
drug effects
;
metabolism
;
physiology
5.Establishment and evaluation of nitrate reductase combined with mycobacteriophage assay.
Ai-Ying XING ; Zhong-Quan LIU ; Hong-Yan JIA ; Shu-Xiang GU ; Zong-De ZHANG
Acta Academiae Medicinae Sinicae 2009;31(4):413-416
<p>OBJECTIVETo establish a rapid, inexpensive, and simple drug susceptibility test (DST) for Mycobacterium tuberculosis (M. tb) and evaluate its feasibility.p><p>METHODWe used nitrate reductase combined with mycobacteriophage assay (PhaB-NRA) to test 49 clinical M. tb isolates of, and the results were compared with those of PhaB-NRA and traditional absolute concentration method.p><p>RESULTSThe sensitivity, specificity, and accuracy of PhaB-NRA for rifampicin were 89.1%, 91.67%, and 89.8%; on the contrary, those of isonicotinyl hydrazide were 86.21%, 90.0%, and 87.8%, respectively. The coincidence between PhaB-NRA and traditional assay were 0.746 for rifampicin and 0.750 for isonicotinyl hydrazide.p><p>CONCLUSIONSPhaB-NRA is an inexpensive, rapid, and simple DST method. It is a promising rapid screening technique for DST of M. tb.p>
Anti-Bacterial Agents
;
pharmacology
;
Biological Assay
;
methods
;
Humans
;
Microbial Sensitivity Tests
;
methods
;
Mycobacteriophages
;
physiology
;
Mycobacterium tuberculosis
;
drug effects
;
Nitrate Reductase
;
metabolism
;
Rifampin
;
pharmacology
;
Sensitivity and Specificity
6.Effects of NH4(+)-N/NO3(-)-N ratio in applied supplementary fertilizer on nitrogen metabolism, photosynthesis and growth of Isatis indigotica.
Fengxia YAN ; Kangcai WANG ; Qingyun LUO ; Chunhong LUO
China Journal of Chinese Materia Medica 2009;34(16):2039-2042
<p>OBJECTIVETo study the effect of NH4(+)-N/NO3(-)-N ratios in the applied supplementary fertilizer on the growth, nitrogen metabolis related enzymes activity and photosynthetic characteristics of Isatis indigotica.p><p>METHODThe sand culture experiment was conducted, and seedling of I. indigotica was fertilized with the mixed nutrition that containing the Hoagland's macro elements and the Aron's micro elements, the additional 63 mmol N was supplementary with the NH4(+)-N/NO3(-)-N ratio of 100:0, 75:25, 50:50, 25:75 and 0:100.p><p>RESULTThe biomass of I. indigotica increased at first when the supplementary N of NH4(+)-N/NO3(-)-N ratio changed from 100:0 to 50:50 and decreased afterwards. The maximum value was at 50:50 and the minimum at 100: 0. With increasing the ratio of NO3(-)-N, the activity of nitrate reductase and glutamine synthetase increased and then decreased and the relationship between the activity and the ratio could be described with an approximate parabola curve. The net photosynthetic rate of I. indigotica was the highest at the NH4(+)-N/NO3(-)-N ratio of 75:25 and the lowest at 100:0.p><p>CONCLUSIONIncreasing the NO3(-)-N ratio properly was beneficial to promote the growth and improve the activity of nitrate reductase and glutamine synthetase and net photosynthetic rate of I. indigotica.p>
Biomass
;
Fertilizers
;
analysis
;
Isatis
;
chemistry
;
enzymology
;
growth & development
;
metabolism
;
Nitrate Reductase
;
metabolism
;
Nitrate Reductases
;
metabolism
;
Nitrates
;
analysis
;
metabolism
;
Nitrogen
;
analysis
;
metabolism
;
Photosynthesis
;
Plant Proteins
;
metabolism
;
Quaternary Ammonium Compounds
;
analysis
;
metabolism
7.Progress in study on microbial enzymes for the metabolism of environmental refractory organic compounds.
Ke WU ; Renrui PAN ; Jingmin CAI ; Bin LIU
Chinese Journal of Biotechnology 2009;25(12):1871-1881
With the rapid development of socialization and industrialization, more and more pollutes were produced and discharged into natural environment. It is harmful to human health and life. These pollutes included refractory degradation organic compounds like PAHs, RDX, HMX, CL-20, PCBs and alkanes and their relative substances. Various compounds exist in nature with long life span. They are the most hazardous than other organics. The impact of pollutes can be treated by microorganisms. Results showed that it is an effective way for bioremediation of these pollutes with microbial metabolism or cometabolism. A few key enzymes, mainly oxidative and reductive enzymes, connected with the first step of initial degradation. Normally, enzymes grouped with other active fraction on the cell membrane are composed of one oxidative and reductive system for substrates oxidation. The metabolic intermediates can be used with TCA by microorganisms. The pathways of metabolism and the key enzymes were summarized. The further research topics should be focused on microorganism screen and its relative enzyme, pathway and mechanism of metabolism or cometabolism for such compounds degradation, and the result was hoped for the environmental protection.
Bacteria
;
enzymology
;
metabolism
;
Biodegradation, Environmental
;
Environmental Pollutants
;
metabolism
;
Nitroreductases
;
metabolism
;
Organic Chemicals
;
isolation & purification
;
metabolism
;
Oxidation-Reduction
;
Oxidoreductases
;
metabolism
;
Polychlorinated Biphenyls
;
metabolism
;
Polycyclic Aromatic Hydrocarbons
;
metabolism
8.Directed molecular evolution of nitrite oxido-reductase by DNA-shuffling.
Jun-Wen LI ; Jin-Lai ZHENG ; Xin-Wei WANG ; Min JIN ; Fu-Huan CHAO
Biomedical and Environmental Sciences 2007;20(2):113-118
<p>OBJECTIVETo develop directly molecular evolution of nitrite oxido-reductase using DNA-shuffling technique because nitrobacteria grow extremely slow and are unable to nitrify effectively inorganic nitrogen in wastewater treatment.p><p>METHODSThe norB gene coding the ndtrite oxido-reductase in nitrobacteria was cloned and sequenced. Then, directed molecular evolution of nitrite oxido-reductase was developed by DNA-shuffling of 15 norB genes from different nitrobacteria.p><p>RESULTSAfter DNA-shuffling with sexual PCR and staggered extension process PCR, the sequence was different from its parental DNA fragments and the homology ranged from 98% to 99%. The maximum nitrification rate of the modified bacterium of X16 by DNA-shuffling was up to 42.9 mg/L x d, which was almost 10 times higher than that of its parental bacteria. Furthermore, the modified bacterium had the same characteristics of its parental bacteria of E. coli and could grow rapidly in normal cultures.p><p>CONCLUSIONDNA-shuffling was successfully used to engineer E. coli, which had norB gene and could degrade inorganic nitrogen effectively.p>
Cloning, Molecular
;
DNA Shuffling
;
Deltaproteobacteria
;
enzymology
;
genetics
;
Directed Molecular Evolution
;
Escherichia coli
;
genetics
;
Gammaproteobacteria
;
enzymology
;
genetics
;
Nitrite Reductases
;
chemistry
;
genetics
;
Nitrogen
;
metabolism
;
Phylogeny
;
Sequence Analysis, DNA
9.Effect of spermine on cell growth and polysaccharide production in suspension cultures of protocorm-like bodies from Dendrobium huoshanense.
Ming WEI ; Shao-Tong JIANG ; Jian-Ping LUO
Chinese Journal of Biotechnology 2007;23(2):327-331
The effect of outer spermine on cell growth, accumulation of polysaccharides and utilization of nutrient together with the intracellular polyamine contents were investigated in suspension cultures of protocorm-like bodies from Dendrobium huoshanense. The results indicated that spermine at 0.6 mmol/L was the most effective in increasing cell growth and polysaccharide synthesis. The specific growth rate of cell increased from 0.046d(-1) to 0.054d(-1), and the maximum dry weight and polysaccharide production reached 32.4g DW/L and 2.46g/L respectively, which were 1.32-fold and 1.31-fold that of the control on day 30. The titres of intracellular free polyamines were higher in the cultures treated with spermine than that of the control. Invertase and nitrate reductase activities were found to increase significantly in the cultured cells treated with spermine, which was beneficial to the utilization of carbon and nitrogen source.
Biomass
;
Carbon
;
metabolism
;
Cell Proliferation
;
drug effects
;
Cells, Cultured
;
Dendrobium
;
cytology
;
drug effects
;
metabolism
;
Nitrate Reductase
;
metabolism
;
Nitrogen
;
metabolism
;
Plant Proteins
;
metabolism
;
Plant Stems
;
cytology
;
drug effects
;
metabolism
;
Polyamines
;
metabolism
;
Polysaccharides
;
biosynthesis
;
Spermine
;
pharmacology
;
Time Factors
;
beta-Fructofuranosidase
;
metabolism
10.Rapid testing on drug susceptibility of Mycobacterium tuberculosis with nitrate reducrase assay.
Zhong-Quan LIU ; Chuan-You LI ; Xiao-You CHEN ; Xi CHEN ; Yu MA
Chinese Journal of Epidemiology 2007;28(7):697-699
<p>OBJECTIVETo establish a rapid method for testing drug sussceptibility on Mycobacterium tuberculosis.p><p>METHODSTaking absolute Concentration method for drug susceptibility testing of M. tuberculosis as the "gold standard", we examined the drug-resistant of M. tuberculosis strain with nitrate reducrase assay (NRA) and the drug-resistant of M. tuberculosis germ in sputum with NRA.p><p>RESULTSNRA and absolute concentration method was basically comparable with NRA susceptibility as 96.5% and the specificity was 100%, When comparing with traditional absolute concentration method, NRA could shorten the time about 3 weeks. Using NRA to test the drug-resistant of M. tuberculosis germ in sputum, its susceptibility was more than 66.7% and specificity was 100%, within 10-20 days.p><p>CONCLUSIONNRA could be used as a rapid drug susceptibility testing on M. tuberculosis.p>
Anti-Bacterial Agents
;
pharmacology
;
Drug Resistance, Bacterial
;
Enzyme Assays
;
methods
;
Humans
;
Microbial Sensitivity Tests
;
methods
;
Mycobacterium tuberculosis
;
drug effects
;
pathogenicity
;
Nitrate Reductase
;
metabolism
;
Sputum
;
microbiology

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