1.Advances in the catalytic promiscuity of nitrilases.
Hongjuan DIAO ; Xinfan LIN ; Renchao ZHENG ; Yuguo ZHENG
Chinese Journal of Biotechnology 2025;41(1):131-147
As important biocatalysts, nitrilases can efficiently convert nitrile groups into acids and ammonia in a mild and eco-friendly manner, being widely used in the synthesis of important pharmaceutical intermediates. Early studies reported that nitrilases only had the hydrolysis activity of catalyzing the formation of corresponding carboxylic acid products from nitriles, showing catalytic specificity. However, recent studies have shown that some nitrilases exhibit the hydration activity for catalyzing the formation of amides from nitriles, showing catalytic promiscuity. The catalytic promiscuity of nitrilases has dual effects. On the one hand, the presence of amide by-products increases the difficulties and costs of subsequent separation and purification of carboxylic acid products. On the other hand, however, if the catalytic reaction pathways of nitrilases can be precisely regulated to reshape enzyme functions, the reactions catalyzed by nitrilases can be broadened to provide new ideas for the biosynthesis of high-value amides, which is crucial for the development of artificial enzymes and biocatalysis. This review summarized the research progress in the catalytic promiscuity of nitrilases and discussed the key regulatory factors that may affect the catalytic promiscuity of nitrilases from the evolutionary origin, catalytic domains, and catalytic mechanisms, hoping to provide reference and inspiration for the application of nitrilases in biocatalysis.
Aminohydrolases/chemistry*
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Biocatalysis
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Nitriles/chemistry*
;
Substrate Specificity
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Catalytic Domain
;
Catalysis
2.Euphorbia fischeriana extract reactivates latent HIV through nuclear factor-κB pathway.
Xiaoyan PAN ; Mingjiao ZHANG ; Xiaoyun ZENG ; Jian LIN ; Lin LI ; Minmin LI ; Wei ZHAO
Journal of Southern Medical University 2015;35(11):1614-1618
OBJECTIVETo investigate the effect of Euphorbia fischeriana extract on latent HIV reactivation and the pathway involved in this process and discuss the value of Euphorbia fischeriana extract in eliminating HIV.
METHODSFresh tissues of Euphorbia fischeriana root were crushed into powder after quick freezing with liquid nitrogen and extracted with acetone followed by a three-day vacuum freeze-drying for dehydration of the extract. The extract (EFE) was separated using RP-C18 column with high-performance liquid chromatography (HPLC) and identified with mass spectrometry (MS). The activity of reactivated latent HIV was analyzed by fluorescence-activated cell sorting in a J-Lat 10.6 cell model treated with EFE (50 µg/mL) for 24 h, using TNF-α (10 ng/mL) as the positive control. The effect of a NF-κB pathway inhibitor (Bay 11-7082) on EFE activity was tested. The changes in P65 expression in the cell nuclei within 2 h and HIV protein p24 expression within 24 h were analyzed by Western blotting in cells treated with EFE.
RESULTSEFE was obtained by one-step acetone extraction, and the concentration of prostratin in the extract was around 0.53 mmol/L. About 50% of the cells showed HIV reactivation after treatment with 50 µg/mL EFE for 24 h accompanied by a significantly increased p24 expression. The activity of EFE in reactivating latent HIV was inhibited by Bay 11-7082 in a concentration-dependent manner, and p65 accumulation was detected in the cell nuclei within 2 h.
CONCLUSIONEFE we obtained contains the active compounds of prostratin and its analogues and shows a strong capacity to reactivate latent HIV through classical NF-κB pathway.
Euphorbia ; chemistry ; Flow Cytometry ; HIV ; drug effects ; HIV Infections ; Humans ; NF-kappa B ; metabolism ; Nitriles ; Phorbol Esters ; chemistry ; Plant Extracts ; pharmacology ; Signal Transduction ; Sulfones ; Tumor Necrosis Factor-alpha ; Virus Latency ; drug effects
3.Determination of myclobutanil 25% WG degradation dynamics in ginseng root, stem, leaf and soil by HPLC-MS/MS.
Yan WANG ; Chun-Wei WANG ; Jie GAO ; Li-Li CUI ; Yun-Cheng XU
China Journal of Chinese Materia Medica 2014;39(13):2464-2468
A high performance liquid chromatography coupled with tandem mass spectrometry (HPLC-MS/MS) method was developed for determining degradation dynamics and final residues of myclobutanil 25% WG in ginseng root, stem, leaf and soil. The samples were extracted with acetonitrile, cleaned-up with primary secondary amine (PSA) solid phase extraction cartridge, separated by Kromasil Eternity-5-C18 (2.1 mm x 150 mm, 5 microm) column with a gradient of acetonitrile and 0.1% formate in water as mobile phases, and analyzed with the multiple reaction monitoring (MRM) in positive ion mode by employing the external standard method. The average recoveries and the relative standard derivations (RSDs) of myclobutanil at the spiked level of 0.01-0.20 mg x kg(-1) were 80.9%-90.7% and 5.54%-9.29%, respectively, and the limit of quantification (LOQ) was 0.005 mg x kg(-1). The method with good reproducible, high precision and low detection limit could meet the requirements of residual analysis on ginseng production. The half-lives of myclobutanil were from 6.25 days to 9.94 days in ginseng root, stem, leaf and soil at spraying dosage of 1 152 g x hm(-2) The final residues were below 0.060 1 mg x kg(-1) in root, below 0.081 7 mg x kg(-1) in stem, 0.006 0-0.102 2 mg x kg(-1) in leaf and below 0.037 6 mg x kg(-1) in soil at spraying dosage range from 576 to 1 152 g x hm(-2). It is recommended that the MRLs of myclobutanil in dried ginseng may be suggested to be 0.10 mg x kg(-1) temporarily, and the preharvest interval was set at 35 days.
Chromatography, High Pressure Liquid
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methods
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Drug Contamination
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Fungicides, Industrial
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chemistry
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Nitriles
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chemistry
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Panax
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chemistry
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Plant Leaves
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chemistry
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Plant Roots
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chemistry
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Plant Stems
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chemistry
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Soil Pollutants
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chemistry
;
Spectrometry, Mass, Electrospray Ionization
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methods
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Tandem Mass Spectrometry
;
methods
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Triazoles
;
chemistry
4.GC-MS analysis of Cocus nucifera flower extract and its effects on heterogeneous symptoms of polycystic ovarian disease in female Wistar rats.
V SOUMYA ; Y Indira MUZIB ; P VENKATESH ; K HARIPRASATH
Chinese Journal of Natural Medicines (English Ed.) 2014;12(9):677-684
AIM:
To evaluate the effect of Cocus nucifera L. flowers in reducing the major multiple symptoms of letrozole-induced polycystic ovarian disease (PCOD) in female rats.
METHOD:
Female, virgin Wistar rats were treated with letrozole (1 mg/kg body wt) to induce PCOD, and after 21 days of induction rats were administered orally with 100 and 200 mg·kg(-1) of Cocus nucifera flower aqueous extract, respectively. Estrus cycle and blood sugar were monitored once a week throughout the study. After scarification, various biochemical parameters, such as antioxidant status (superoxide dismutase (SOD) and glutathione reductase (GSH)) of the uterus homogenate, lipid profile (total cholesterol (TC), high density lipoprotein (HDL), low density lipoprotein (LDL), and triglycerides (TG)) of the serum were determined. Weights of the uterus and ovaries were separately monitored. The characteristics of changes in the ovary were evaluated by histopathological studies.
RESULTS:
GC-MS analysis of the aqueous extract showed the presence of volatile and pharmacologically active phytoconstituents. C. nucifera flower extract-treated groups showed estrus cyclicity and increased uterus weight which indicates the estrogenic effect. The improved blood sugar level, ideal lipid profile, good antioxidant status, and histopathology results revealed the recovery from poly cystic ovaries.
CONCLUSION
The results indicate that C. nucifera flower is a potential medicine for the treatment of PCOD and this study supports the traditional uses of C. nucifera flower.
Animals
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Antioxidants
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metabolism
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Blood Glucose
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metabolism
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Cocos
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chemistry
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Estrus
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drug effects
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Female
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Flowers
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chemistry
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Gas Chromatography-Mass Spectrometry
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Hypoglycemic Agents
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pharmacology
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therapeutic use
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Letrozole
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Lipids
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blood
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Nitriles
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Oils, Volatile
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analysis
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pharmacology
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therapeutic use
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Ovary
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drug effects
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pathology
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Phytoestrogens
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pharmacology
;
therapeutic use
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Phytotherapy
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Plant Extracts
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chemistry
;
pharmacology
;
therapeutic use
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Polycystic Ovary Syndrome
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blood
;
chemically induced
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drug therapy
;
pathology
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Rats, Wistar
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Triazoles
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Uterus
;
drug effects
5.Chemical constituents from the linseed meal.
Li SONG ; Jian-Gong SHI ; Sheng LIN ; Yong-Chun YANG ; Chun-Suo YAO
Acta Pharmaceutica Sinica 2013;48(4):521-525
Ten compounds were isolated from the 70% ethanol extract of linseed meal (Linum usitatissimum L) through a combination of various chromatographic techniques, including silica gel, macroporous adsorbent resin, Sephadex LH-20, and preparative HPLC. On the basis of spectroscopic data analysis, they were elucidated as 1-methylethyl-2-O-beta-D-glucopyranosyl-(1" --> 6')-beta-D-glucopyanoside (1), linustatin (2), neolinustatin (3), lotaustralin (4), linamarin (5), deoxyguanosine (6), deoxyadenosine (7), (+)-pinoresinol-4'-O-beta-D-glucopyranoside (8), 4-O-beta-D-glucopyranosylvanillyl alcohol (9) and tachioside (10), separately. Among them, compound 1 is a new compound, and compounds 6, 8 and 10 were isolated from the linseed meal for the first time.
Amygdalin
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analogs & derivatives
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chemistry
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isolation & purification
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Deoxyadenosines
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chemistry
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isolation & purification
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Deoxyguanosine
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chemistry
;
isolation & purification
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Flax
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chemistry
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Glucosides
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chemistry
;
isolation & purification
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Glycosides
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chemistry
;
isolation & purification
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Lignans
;
chemistry
;
isolation & purification
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Molecular Structure
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Nitriles
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chemistry
;
isolation & purification
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Plants, Medicinal
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chemistry
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Seeds
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chemistry
6.Biocatalytic desymmetric hydrolysis of 3-(4-chlorophenyl)-glutaronitrile to the key precursor of optically pure baclofen.
Meizhen XU ; Jie REN ; Jingsong GONG ; Wenyue DONG ; Qiaqing WU ; Zhenghong XU ; Dunming ZHU
Chinese Journal of Biotechnology 2013;29(1):31-40
We produced (S)-4-cyano-3-(4-chlorophenyl)-butyrate by highly stereoselective biocatalyst in this study. A nitrilase-producing strain, named Gibberella intermedia WX12, was isolated by 3-(4-chlorophenyl)-glutaronitrile as substrate in the screening with phenol-sodium hypochlorite method. The fermentation conditions and catalytic properties of this strain were investigated. The preferred carbon and nitrogen sources for nitrilase production were lactose (30 g/L) and peptone (20 g/L). After being cultivated for 96 h, the cells were collected for use in biotransformation. The hydrolysis of 3-(4-chlorophenyl)-glutaronitrile was performed at 30 degrees C in phosphate buffer (pH 8.0, 50 mmol/L) for 24 h to give (S)-4-cyano-3-(4-chlorophenyl)-butyric acid with 90% yield and > 99% of ee, which can be used for the synthesis of (R)- and (S)-baclofen. The configuration of product was determined by chemically converting it to baclofen and comparison with the authentic sample by chiral HPLC analysis.
Aminohydrolases
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metabolism
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Baclofen
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chemical synthesis
;
chemistry
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Biocatalysis
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Chlorophenols
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chemistry
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Gibberella
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enzymology
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Hydrolysis
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Nitriles
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chemistry
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Prodrugs
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chemical synthesis
;
chemistry
7.Oxidative stress, biochemical and histopathological alterations in the liver and kidney of female rats exposed to low doses of deltamethrin (DM): a molecular assessment.
Issam CHARGUI ; Intissar GRISSA ; Fatma BENSASSI ; Mohamed Yahia HRIRA ; Samir HAOUEM ; Zohra HAOUAS ; Hassen BENCHEIKH
Biomedical and Environmental Sciences 2012;25(6):672-683
OBJECTIVETo evaluate histopathological alterations of the liver and kidney of female rats exposed to low doses of DM and its potential genotoxic activity.
METHODSFemale Wistar rats were randomly assigned to control (3 groups, 6 rats in each) and treatment groups (3 groups, 6 rats in each). They were subjected to subcutaneous injections of DM (at doses of 0.003, 0.03, and 0.3 mg/kg bw/d) after 30, 45, and 60 d, respectively.
RESULTSSignificant alterations were recorded in liver parenchyma induced by hepatic vacuolization, fragmented chromatin in nuclei, dilatation of sinusoids and congestions. Lesions within proximal and distal tubules were observed in the kidneys. Tissue congestions and severe alterations within glomeruli were visible. DM as a pyrethroid insecticide induced significant increase (P≤0.05) of plasma MDA concentrations after 45 d. A significant increase (P≤0.05) in plasma ALT (after 45 and 60 d) and AST (after 60 d) concentrations was recorded as compared to controls. During the whole experimental period the toxic agent provoked significant DNA damages (P≤0.05), especially in the dominance of classes 3 and 4 of obtained comet.
CONCLUSIONDM even at a very low dose displays harmful effects by disrupting hepatic and renal function and causing DNA damages in puberscent female rats. Low doses of DM are hepatotoxic and nephrotoxic.
Animals ; Aspartate Aminotransferases ; metabolism ; Behavior, Animal ; drug effects ; Chemical and Drug Induced Liver Injury ; metabolism ; pathology ; Creatinine ; blood ; Dose-Response Relationship, Drug ; Female ; Insecticides ; administration & dosage ; chemistry ; toxicity ; Kidney ; drug effects ; Kidney Diseases ; chemically induced ; pathology ; Liver ; drug effects ; Malondialdehyde ; Molecular Structure ; Nitriles ; administration & dosage ; chemistry ; toxicity ; Organ Size ; Oxidative Stress ; drug effects ; Pyrethrins ; administration & dosage ; chemistry ; toxicity ; Random Allocation ; Rats ; Urea ; blood ; Weight Gain ; drug effects
8.Progress in study of the structure, catalytic mechanism and inhibitors of aromatase.
Jing FU ; Zhong-Hua SHEN ; Fei-Xiong CHENG ; Gui-Xia LIU ; Wei-Hua LI ; Yun TANG
Acta Pharmaceutica Sinica 2012;47(1):18-28
Aromatase is a key enzyme responsible for in vivo estrogen biosynthesis. Inhibition of the activity of the aromatase has become an alterative way for treatment of breast cancer. In this review, the structure and catalytic mechanism of the aromatase is briefly introduced followed by thorough review of the progress in the study of the steroidal and non-steroidal aromatase inhibitors. This review is focused on the natural compounds that exhibit the aromatase inhibition, which include flavonoids, xanthones, coumarins, and sesquiterpenes. The structure-activity relationship of these compounds is also discussed.
Androstenedione
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analogs & derivatives
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Antineoplastic Agents
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chemistry
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pharmacology
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therapeutic use
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Aromatase
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chemistry
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metabolism
;
pharmacology
;
Aromatase Inhibitors
;
chemistry
;
classification
;
pharmacology
;
therapeutic use
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Breast Neoplasms
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drug therapy
;
Catalysis
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Coumarins
;
chemistry
;
pharmacology
;
Estrogens
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biosynthesis
;
Flavonoids
;
chemistry
;
pharmacology
;
Humans
;
Inhibitory Concentration 50
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Nitriles
;
chemistry
;
pharmacology
;
Sesquiterpenes
;
chemistry
;
pharmacology
;
Structure-Activity Relationship
;
Triazoles
;
chemistry
;
pharmacology
;
Xanthones
;
chemistry
;
pharmacology
9.Comparison of Pharmacokinetics and Safety of Two Formulations of Letrozole (2.5 mg) in Healthy Male Volunteers.
Yook Hwan NOH ; Kyun Seop BAE ; Sang Heon CHO ; Sangmin CHOE ; Jong Lyul GHIM ; Jin Ah JUNG ; Un Jib KIM ; Seok Joon JIN ; Hyun Jung PARK ; Jung Chul KIM ; Hyeong Seok LIM
Journal of Korean Society for Clinical Pharmacology and Therapeutics 2012;20(2):135-144
BACKGROUND: Letrozole is an oral non-steroidal inhibitor of the aromatase enzyme, which has proven to be a useful drug against breast cancer. METHODS: This single-dose, randomized 2 x 2 crossover study was conducted in healthy male volunteers. Participants of each sequence group (each 13 volunteers for sequence group) received, in randomized sequence, a single oral 2.5-mg dose of generic letrozole (test) or branded letrozole (reference). Each treatment period was separated by a 5-week washout period. Blood samples were collected for up to 312 hours after drug administration, and drug concentrations were determined using validated LC/MS-MS. Pharmacokinetic properties were obtained using noncompartmental analysis. Drug tolerability was assessed throughout the study, using measurements of vital signs, physical examination, clinical chemistry testing, EKG, and interviews. RESULTS: A total of 26 subjects completed the study. The geometric mean ratios (90% CI) of Cmax and AUClast were 0.92 (0.85 - 0.99) and 1.01 (0.97 - 1.04), respectively. No serious AEs were reported, and there were no clinically significant differences between test and reference groups. CONCLUSION: The findings from this study suggest bioequivalence between two formulations of letrozole in healthy male volunteers. The safety profile of two formulations had similar characteristics.
Aromatase
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Breast
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Clinical Chemistry Tests
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Cross-Over Studies
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Electrocardiography
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Humans
;
Male
;
Nitriles
;
Physical Examination
;
Therapeutic Equivalency
;
Triazoles
;
Vital Signs
10.The pharmacological mechanism of gastrodin on calcitonin gene-related peptide of cultured rat trigeminal ganglion.
Guo-Gang LUO ; Wen-Jing FAN ; Xing-Yun YUAN ; Bo-Bo YUAN ; She-Min LÜ ; Yong-Xiao CAO ; Cang-Bao XU
Acta Pharmaceutica Sinica 2011;46(12):1451-1456
The Chinese herbal medicine Tianma (Gastrodia elata) has been used for treating and preventing primary headache over thousands of years, but the exact pharmacological mechanism of the main bioactive ingredient gastrodin remains unclear. In present study, the effects of gastrodin on calcitonin gene-related peptide (CGRP) and phosphorylated extracellular signal-regulated kinase1/2 (pERK1/2) expression were observed in rat trigeminal ganglion (TG) after in vitro organ culture to explore the underlying intracellular mechanism of gastrodin on primary vascular-associated headache. CGRP-immunoreactivity (CGRP-ir) positive neurons count, positive area, mean optical density and integrated optical density by means of immunohistochemistry stain were compared at different concentrations of gastrodin, which was separately co-incubated with DMEM in SD rat TG for 24 hours. Only at 5 or 10 mmol L(-1) concentration, gastrodin demonstrated significantly concentration-dependent reduction of CGRP-ir (+) expression and its action closed to 1.2 mmol L(-1) sumatriptan succinate. While at 2.5, 20, and 40 mmol L(-1) concentration, gastrodin did not show remarkable effects on CGRP-ir (+) expression. The optimal concentration of gastrodin (5 and 10 mmol L(-1)) similarly inhibited CGRP-mRNA expression level separately compared with 1.2 mmol L(-1) sumatriptan succinate and 10 micromol L(-1) flunarizine hydrochloride, which was quantitatively analyzed by real-time PCR (RT-PCR). pERK1/2 level was examined by Western blotting after co-cultured with optimal concentration of gastrodin and effective specific ERK1/2 pathway inhibitors PD98059, U0126. The result indicated that gastrodin significantly reduced pERK1/2 protein actions similarly to ERK1/2 pathway specific blockade. It suggests ERK1/2 signaling transduction pathway may be involved in gastrodin intracellular mechanism. This study indicates gastrodin (5 and 10 mmol L(-1)) can remarkably reduce CGRP-ir (+) neuron, CGRP-mRNA and pERK1/2 expression level in cultured rat TG, with its actions similar to the effective concentration of sumatriptan succinate, flunarizine hydrochloride and specific ERK1/2 pathway blocker. The intracellular signaling transduction ERK1/2 pathway may be involved in the gastrodin reducing CGRP up-regulation in rat TG after organ culture.
Animals
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Benzyl Alcohols
;
administration & dosage
;
isolation & purification
;
pharmacology
;
Butadienes
;
pharmacology
;
Calcitonin Gene-Related Peptide
;
genetics
;
metabolism
;
Dose-Response Relationship, Drug
;
Flavonoids
;
pharmacology
;
Flunarizine
;
pharmacology
;
Gastrodia
;
chemistry
;
Glucosides
;
administration & dosage
;
isolation & purification
;
pharmacology
;
MAP Kinase Signaling System
;
drug effects
;
Male
;
Mitogen-Activated Protein Kinase 1
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antagonists & inhibitors
;
metabolism
;
Mitogen-Activated Protein Kinase 3
;
antagonists & inhibitors
;
metabolism
;
Nitriles
;
pharmacology
;
Organ Culture Techniques
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Plants, Medicinal
;
chemistry
;
RNA, Messenger
;
Rats
;
Rats, Sprague-Dawley
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Sumatriptan
;
pharmacology
;
Trigeminal Ganglion
;
metabolism
;
Vasoconstrictor Agents
;
pharmacology
;
Vasodilator Agents
;
pharmacology

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