1.Frontiers and development in live-cell super-resolution fluorescence microscopy.
Yufei CHENG ; Wei LI ; Tingting JIN ; Sisi WU ; Longhao ZHANG
Journal of Biomedical Engineering 2023;40(1):180-184
This paper reviews the research progress on live-cell super-resolution fluorescence microscopy, discusses the current research status and hotspots in this field, and summarizes the technological application of super-resolution fluorescence microscopy for live-cell imaging. To date, this field has gained progress in numerous aspects. Specifically, the structured illumination microscopy, stimulated emission depletion microscopy, and the recently introduced minimal photon fluxes microscopy are the current research hotspots. According to the current progress in this field, future development trend is likely to be largely driven by artificial intelligence as well as advances in fluorescent probes and relevant labelling methods.
Artificial Intelligence
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Microscopy, Fluorescence
;
Fluorescent Dyes
;
Technology
2.Adzuki bean (Vigna angularis) extract reduces amyloid-β aggregation and delays cognitive impairment in Drosophila models of Alzheimer's disease
Honami MIYAZAKI ; Yoko OKAMOTO ; Aya MOTOI ; Takafumi WATANABE ; Shigeru KATAYAMA ; Sei ichi KAWAHARA ; Hidefumi MAKABE ; Hiroshi FUJII ; Shinichi YONEKURA
Nutrition Research and Practice 2019;13(1):64-69
BACKGROUND/OBJECTIVES: Alzheimer's disease is a neurodegenerative disease that induces symptoms such as a decrease in motor function and cognitive impairment. Increases in the aggregation and deposition of amyloid beta protein (Aβ) in the brain may be closely correlated with the development of Alzheimer's disease. In this study, the effects of an adzuki bean extract on the aggregation of Aβ were examined; moreover, the anti-Alzheimer's activity of the adzuki extract was examined. MATERIALS/METHODS: First, we undertook thioflavin T (ThT) fluorescence analysis and transmission electron microscopy (TEM) to evaluate the effect of an adzuki bean extract on Aβ42 aggregation. To evaluate the effects of the adzuki extract on the symptoms of Alzheimer's disease in vivo, Aβ42-overexpressing Drosophila were used. In these flies, overexpression of Aβ42 induced the formation of Aβ42 aggregates in the brain, decreased motor function, and resulted in cognitive impairment. RESULTS: Based on the results obtained by ThT fluorescence assays and TEM, the adzuki bean extract inhibited the formation of Aβ42 aggregates in a concentration-dependent manner. When Aβ42-overexpressing flies were fed regular medium containing adzuki extract, the Aβ42 level in the brain was significantly lower than that in the group fed regular medium only. Furthermore, suppression of the decrease in motor function, suppression of cognitive impairment, and improvement in lifespan were observed in Aβ42-overexpressing flies fed regular medium with adzuki extract. CONCLUSIONS: The results reveal the delaying effects of an adzuki bean extract on the progression of Alzheimer's disease and provide useful information for identifying novel prevention treatments for Alzheimer's disease.
Alzheimer Disease
;
Amyloid beta-Peptides
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Brain
;
Cognition Disorders
;
Diptera
;
Drosophila
;
Fluorescence
;
Microscopy, Electron, Transmission
;
Neurodegenerative Diseases
3.Recent trends in two-photon auto-fluorescence lifetime imaging (2P-FLIM) and its biomedical applications
Harsh RANAWAT ; Sagnik PAL ; Nirmal MAZUMDER
Biomedical Engineering Letters 2019;9(3):293-310
Two photon fluorescence microscopy and the numerous technical advances to it have served as valuable tools in biomedical research. The fluorophores (exogenous or endogenous) absorb light and emit lower energy photons than the absorption energy and the emission (fluorescence) signal is measured using a fluorescence decay graph. Additionally, high spatial resolution images can be acquired in two photon fluorescence lifetime imaging (2P-FLIM) with improved penetration depth which helps in detection of fluorescence signal in vivo. 2P-FLIM is a non-invasive imaging technique in order to visualize cellular metabolic, by tracking intrinsic fluorophores present in it, such as nicotinamide adenine dinucleotide, flavin adenine dinucleotide and tryptophan etc. 2P-FLIM of these molecules enable the visualization of metabolic alterations, non-invasively. This comprehensive review discusses the numerous applications of 2P-FLIM towards cancer, neuro-degenerative, infectious diseases, and wound healing.
Absorption
;
Communicable Diseases
;
Flavin-Adenine Dinucleotide
;
Fluorescence
;
Microscopy, Fluorescence
;
NAD
;
Photons
;
Tryptophan
;
Wound Healing
4.Pathology of C3 Glomerulopathy
Su Jin SHIN ; Yoonje SEONG ; Beom Jin LIM
Childhood Kidney Diseases 2019;23(2):93-99
C3 glomerulopathy is a renal disorder involving dysregulation of alternative pathway complement activation. In most instances, a membranoproliferative pattern of glomerular injury with a prevalence of C3 deposition is observed by immunofluorescence microscopy. Dense deposit disease (DDD) and C3 glomerulonephritis (C3GN) are subclasses of C3 glomerulopathy that are distinguishable by electron microscopy. Highly electron-dense transformation of glomerular basement membrane is characteristic of DDD. C3GN should be differentiated from post-infectious glomerulonephritis and other immune complex-mediated glomerulonephritides showing C3 deposits.
Complement Activation
;
Complement Pathway, Alternative
;
Dichlorodiphenyldichloroethane
;
Glomerular Basement Membrane
;
Glomerulonephritis
;
Glomerulonephritis, Membranoproliferative
;
Microscopy, Electron
;
Microscopy, Fluorescence
;
Pathology
;
Prevalence
5.Diagnostic Utilization of Laser Fluorescence for Resin Infiltration in Primary Teeth
Soyoung PARK ; Taesung JEONG ; Jiyeon KIM ; Shin KIM
Journal of Korean Academy of Pediatric Dentistry 2019;46(3):265-273
This study was performed to evaluate clinical use of laser fluorescence (LF) to identify early childhood caries lesions suitable for applying resin infiltration.20 exfoliated primary molars with proximal caries were selected and cut buccolingually cross the central pit for regarding the mesial and distal surfaces respectively. 27 specimens corresponding to ICDAS code 1 and 2 were selected and the LF values were measured. When infiltrant resin was applied, double staining for microscopy detection has done simultaneously. Tooth samples were sliced with 0.7 mm thick. The maximum lesion depth, maximum penetration depth, and average penetration rate were measured from the confocal scanning laser microscope image. Pearson correlation analysis was performed.The intraclass correlation coefficient of LF values shows excellent agreement. LF values had positive correlation with penetration rate, but not lesion depth and penetration depth. Significant correlation between LF readings and penetration rate was verified in deep enamel caries and dentin caries except shallow enamel caries.Infiltrant resin could penetrate with a higher rate and LF values could be increased in more active caries lesions. In assessing radiologically similar caries lesion, laser fluorescence might be useful for identifying caries activity.
Dental Enamel
;
Dentin
;
Fluorescence
;
Microscopy
;
Molar
;
Reading
;
Tooth
;
Tooth, Deciduous
6.Rapid and Sparse Labeling of Neurons Based on the Mutant Virus-Like Particle of Semliki Forest Virus.
Fan JIA ; Xutao ZHU ; Pei LV ; Liang HU ; Qing LIU ; Sen JIN ; Fuqiang XU
Neuroscience Bulletin 2019;35(3):378-388
Sparse labeling of neurons contributes to uncovering their morphology, and rapid expression of a fluorescent protein reduces the experiment range. To achieve the goal of rapid and sparse labeling of neurons in vivo, we established a rapid method for depicting the fine structure of neurons at 24 h post-infection based on a mutant virus-like particle of Semliki Forest virus. Approximately 0.014 fluorescent focus-forming units of the mutant virus-like particle transferred enhanced green fluorescent protein into neurons in vivo, and its affinity for neurons in vivo was stronger than for neurons in vitro and BHK21 (baby hamster kidney) cells. Collectively, the mutant virus-like particle provides a robust and convenient way to reveal the fine structure of neurons and is expected to be a helper virus for combining with other tools to determine their connectivity. Our work adds a new tool to the approaches for rapid and sparse labeling of neurons in vivo.
Animals
;
Cells, Cultured
;
Gene Expression
;
Genetic Vectors
;
genetics
;
metabolism
;
Green Fluorescent Proteins
;
genetics
;
metabolism
;
Immunohistochemistry
;
methods
;
Male
;
Mice, Inbred C57BL
;
Microscopy, Fluorescence
;
methods
;
Neurons
;
cytology
;
metabolism
;
Purkinje Cells
;
cytology
;
metabolism
;
Semliki forest virus
;
genetics
7.A Two-Step GRIN Lens Coating for In Vivo Brain Imaging.
Yupeng YANG ; Lifeng ZHANG ; Zhenni WANG ; Bo LIANG ; Giovanni BARBERA ; Casey MOFFITT ; Yun LI ; Da-Ting LIN
Neuroscience Bulletin 2019;35(3):419-424
The complex spatial and temporal organization of neural activity in the brain is important for information-processing that guides behavior. Hence, revealing the real-time neural dynamics in freely-moving animals is fundamental to elucidating brain function. Miniature fluorescence microscopes have been developed to fulfil this requirement. With the help of GRadient INdex (GRIN) lenses that relay optical images from deep brain regions to the surface, investigators can visualize neural activity during behavioral tasks in freely-moving animals. However, the application of GRIN lenses to deep brain imaging is severely limited by their availability. Here, we describe a protocol for GRIN lens coating that ensures successful long-term intravital imaging with commercially-available GRIN lenses.
Animals
;
Biocompatible Materials
;
Brain
;
physiology
;
Hippocampus
;
cytology
;
Lenses
;
Mice, Inbred C57BL
;
Mice, Transgenic
;
Microscopy, Fluorescence
;
methods
;
Neuroimaging
;
instrumentation
;
methods
;
Neurons
;
physiology
8.Recharacterization of the Canine Adenovirus Type 1 Vaccine Strain based on the Biological and Molecular Properties
Dong Kun YANG ; Ha Hyun KIM ; Eun Jin LEE ; Jae Young YOO ; Soon Seek YOON ; Jungwon PARK ; Chae Hyun KIM ; Ho Ryoung KIM
Journal of Bacteriology and Virology 2019;49(3):124-132
Canine adenovirus type 1 (CAV-1) infection results in hepatitis in dogs. In this study, we investigated the biologic and genetic characteristics of the CAV-1 vaccine strain (CAV1V) to improve quality control about CAV vaccine. The identity of CAV1V as CAV-1 was confirmed based on its cytopathic effects and the results of hemagglutination (HA) and immunofluorescence assays, and electron microscopy. The CAV1V strain reached 10(7.5) TCID(50)/mL in MDCK cells at 4 days post-inoculation and exhibited hemmagglutination activity of 256 U using guinea pig erythrocytes. Intranuclear fluorescence in the infected cells was observed and typical adenoviruses were observed in electon microscope. CAV1V strain was identified as a CAV-1 strain by nucleotide sequence analysis. In a comparison of the nucleotide sequences of the fiber genes of several CAV strains, CAV1V showed the highest similarity (99.8%) with the GLAXO strain, which was isolated in Canada. Our biological characterization of CAV1V will facilitate quality control of the canine hepatitis vaccine.
Adenoviridae
;
Adenoviruses, Canine
;
Animals
;
Base Sequence
;
Canada
;
Dogs
;
Erythrocytes
;
Fluorescence
;
Fluorescent Antibody Technique
;
Guinea Pigs
;
Hemagglutination
;
Hepatitis
;
Madin Darby Canine Kidney Cells
;
Microscopy, Electron
;
Quality Control
9.An Enzymolysis-Assisted Agrobacterium tumefaciens-Mediated Transformation Method for the Yeast-Like Cells of Tremella fuciformis
Yuanyuan WANG ; Danyun XU ; Xueyan SUN ; Lisheng ZHENG ; Liguo CHEN ; Aimin MA
Mycobiology 2019;47(1):59-65
Agrobacterium tumefaciens-mediated transformation (ATMT), as a simple and versatile method, achieves successful transformation in the yeast-like cells (YLCs) of Tremella fuciformis with lower efficiency. Establishment of a more efficient transformation system of YLCs is important for functional genomics research and biotechnological application. In this study, an enzymolysis-assisted ATMT method was developed. The degradation degree of YLCs depends on the concentration and digestion time of Lywallzyme. Lower concentration (≤0.1%) of Lywallzyme was capable of formation of limited wounds on the surface of YLCs and has less influence on their growth. In addition, there is no significant difference of YLCs growth among groups treated with 0.1% Lywallzyme for different time. The binary vector pGEH under the control of T. fuciformis glyceraldehyde-3-phosphate dehydrogenase gene (gpd) promoter was utilized to transform the enzymolytic wounded YLCs with different concentrations and digestion time. The results of PCR, Southern blot, quantitative real-time PCR (qRT-PCR) and fluorescence microscopy revealed that the T-DNA was integrated into the YLCs genome, suggesting an efficient enzymolysis-assisted ATMT method of YLCs was established. The highest transformation frequency reached 1200 transformants per 106 YLCs by 0.05% (w/v) Lywallzyme digestion for 15 min, and the transformants were genetically stable. Compared with the mechanical wounding methods, enzymolytic wounding is thought to be a tender, safer and more effective method.
Agrobacterium
;
Blotting, Southern
;
Digestion
;
Genome
;
Genomics
;
Methods
;
Microscopy, Fluorescence
;
Oxidoreductases
;
Polymerase Chain Reaction
;
Real-Time Polymerase Chain Reaction
;
Wounds and Injuries
10.Imaging and analysis of genetically encoded calcium indicators linking neural circuits and behaviors
Jihae OH ; Chiwoo LEE ; Bong Kiun KAANG
The Korean Journal of Physiology and Pharmacology 2019;23(4):237-249
Confirming the direct link between neural circuit activity and animal behavior has been a principal aim of neuroscience. The genetically encoded calcium indicator (GECI), which binds to calcium ions and emits fluorescence visualizing intracellular calcium concentration, enables detection of in vivo neuronal firing activity. Various GECIs have been developed and can be chosen for diverse purposes. These GECI-based signals can be acquired by several tools including two-photon microscopy and microendoscopy for precise or wide imaging at cellular to synaptic levels. In addition, the images from GECI signals can be analyzed with open source codes including constrained non-negative matrix factorization for endoscopy data (CNMF_E) and miniscope 1-photon-based calcium imaging signal extraction pipeline (MIN1PIPE), and considering parameters of the imaged brain regions (e.g., diameter or shape of soma or the resolution of recorded images), the real-time activity of each cell can be acquired and linked with animal behaviors. As a result, GECI signal analysis can be a powerful tool for revealing the functions of neuronal circuits related to specific behaviors.
Animals
;
Behavior, Animal
;
Brain
;
Calcium Channels
;
Calcium
;
Carisoprodol
;
Endoscopy
;
Fires
;
Fluorescence
;
Ions
;
Microscopy
;
Neuronal Calcium-Sensor Proteins
;
Neurons
;
Neurosciences
;
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