1.Development of a quality control indicator system for neonatal screening of inherited metabolic diseases in obstetric settings.
Hui LI ; Jin ZHANG ; Dan-Feng CAO
Chinese Journal of Contemporary Pediatrics 2025;27(8):994-1001
OBJECTIVES:
To develop a quality control indicator system for neonatal screening of inherited metabolic diseases in obstetric settings, so as to provide a standardized tool for quality control in clinical neonatal screening of inherited metabolic diseases.
METHODS:
From March to May 2024, a literature review combined with expert clinical experience was conducted to develop a preliminary questionnaire on quality control indicators for neonatal screening of inherited metabolic diseases. The final indicator system was established after two rounds of the Delphi method, and the Analytic Hierarchy Process was used to determine indicator weights.
RESULTS:
Sixteen questionnaires were distributed in each of the two consultation rounds, with a valid response rate of 100% for both. The expert authority coefficients were 0.863 and 0.876, respectively. Kendall's coefficient of concordance for the importance and feasibility of the indicators ranged from 0.091 to 0.125. The final indicator system comprised 3 primary indicators, 8 secondary indicators, and 28 tertiary indicators for neonatal screening of inherited metabolic diseases in obstetric settings.
CONCLUSIONS
The quality control indicator system developed using the Delphi method demonstrates a strong systematic structure, high clinical adaptability, and strong operability, and can be effectively applied to quality control in neonatal screening of inherited metabolic diseases in obstetric settings.
Humans
;
Infant, Newborn
;
Neonatal Screening/standards*
;
Quality Control
;
Metabolism, Inborn Errors/diagnosis*
;
Metabolic Diseases/diagnosis*
;
Delphi Technique
;
Female
;
Quality Indicators, Health Care
;
Pregnancy
2.Preimplantation genetic testing for monogenic/single gene disorders in a family with Molybdenum co-factor deficiency.
Zhan LI ; Hong ZHOU ; Jinhui SHU ; Caizhu WANG ; Peng HUANG
Chinese Journal of Medical Genetics 2023;40(2):143-147
OBJECTIVE:
To carry out preimplantation genetic testing for monogenic/single gene disorders (PGT-M) for a Chinese family affected with Molybdenum co-factor deficiency due to pathogenic variant of MOCS2 gene.
METHODS:
A family with molybdenum co-factor deficiency who attended to the Maternal and Child Health Care Hospital of Guangxi Zhuang Autonomous Region in April 2020 was selected as the research subject. Trophoblast cells were biopsied from blastocysts fertilized by intracytoplasmic sperm injection. Embryos carrying the MOCS2 gene variant and chromosome copy number variation (CNV) of more than 4 Mb were detected by single-cell whole genome amplification, high-throughput sequencing and single nucleotide polymorphism typing. Embryos without or carrying the heterozygous variant and without abnormal chromosome CNV were transplanted. During mid-pregnancy, amniotic fluid sample was collected for prenatal diagnosis to verify the results of PGT-M.
RESULTS:
Eleven oocytes were obtained, among which three blastocysts were formed through culturing. Results of genetic testing suggested that one embryo was heterozygous for the maternally derived MOCS2 gene variant and without chromosomal CNV. Following embryo transfer, intrauterine singleton pregnancy was attained. Prenatal diagnosis by amniocentesis at 18 weeks of gestation revealed that the MOCS2 gene variant and chromosomal analysis results were both consistent with that of PGT-M, and a healthy male infant was born at 37+5 weeks of gestation.
CONCLUSION
PGT-M has helped the couple carrying the MOCS2 gene variant to have a healthy offspring, and may become an important method for couples carrying other pathogenic genetic variants.
Female
;
Humans
;
Pregnancy
;
Aneuploidy
;
China
;
DNA Copy Number Variations
;
Genetic Testing/methods*
;
Preimplantation Diagnosis/methods*
;
Metal Metabolism, Inborn Errors/genetics*
3.Analysis of SUOX gene variants and clinical features in a child with Isolated sulfite oxidase deficiency.
Chinese Journal of Medical Genetics 2023;40(2):177-180
OBJECTIVE:
To explore the clinical features and genetic basis for a child with early-onset Isolated sulfite oxidase deficiency (ISOD).
METHODS:
A child with ISOD who was admitted to Weihai Hospital Affiliated to Qingdao University on May 10, 2020 was selected as the study subject. Clinical data of the child was analyzed. The child and her parents were subjected to trio-whole exome sequencing, and candidate variants were verified by Sanger sequencing.
RESULTS:
The female neonate was transferred to the intensive care unit due to "secondary pollution of amniotic fluid and laborious breathing for 11 minutes", and had developed frequent convulsions. Genetic testing revealed that she has harbored c.1200C>G and c.188G>A compound heterozygous variants of the SUOX gene, which were inherited from her mother and father, respectively. The c.1200C>G has been described previously and was rated as pathogenic based on guidelines from the American College of Medical Genetics and Genomics, whilst the c.188G>A variant was unreported previously and rated as variant of unknown significance.
CONCLUSION
The compound heterozygous variants of the SUOX gene probably underlay the ISOD in this child. Above finding has enriched the spectrum of SUOX gene variants and provided a basis for the clinical diagnosis and genetic counseling.
Female
;
Humans
;
Infant, Newborn
;
Amino Acid Metabolism, Inborn Errors/diagnosis*
;
Genetic Counseling
;
Genetic Testing
;
Mutation
;
Oxidoreductases Acting on Sulfur Group Donors/genetics*
;
Sulfite Oxidase/genetics*
4.Clinical features and genetic analysis of a child with 3-methylglutenedioic aciduria type VII due to novel variants of CLPB gene.
Pengwu LIN ; Xuan FENG ; Shengju HAO ; Ling HUI ; Chuan ZHANG ; Bingbo ZHOU ; Lian WANG ; Jingyun SHI ; Qinghua ZHANG
Chinese Journal of Medical Genetics 2023;40(11):1377-1381
OBJECTIVE:
To explore the clinical features and genetic basis for a child with 3-methylglutaconic aciduria type VII.
METHODS:
A child who was diagnosed at the Gansu Provincial Maternity and Child Health Care Hospital on August 9, 2019 was selected as the study subject. Clinical data of the child, including urine gas chromatography and mass spectrometry, were collected. The child and her parents were subjected to whole exome sequencing.
RESULTS:
The child, a female neonate, had presented mainly with intermittent skin cyanosis, convulsions, hypomagnesemia, apnea, neutropenia after birth. Her urine 3-methylpentenedioic acid has increased to 17.53 μmol/L. DNA sequencing revealed that she has harbored compound heterozygous variants of the CLPB gene, namely c.1016delT (p.L339Rfs*5) and c.1087A>G (p.R363G), which were respectively inherited from her mother and father. Both variants were unreported previously. Based on the standards from the American College of Medical Genetics and Genomics (ACMG), the variants were respectively predicted to be pathogenic and likely pathogenic.
CONCLUSION
The child was diagnosed with 3-methylglutenedioic aciduria type VII. Discovery of the c.1016delT and c.1087A>G variants has enriched the mutational spectrum of the CLPB gene.
Female
;
Humans
;
Infant, Newborn
;
Pregnancy
;
Base Sequence
;
Metabolism, Inborn Errors/diagnosis*
;
Mutation
;
Neutropenia/genetics*
;
Sequence Analysis, DNA
5.Genetic variant analysis and prenatal diagnosis for Chinese pedigrees affected with cblC methylmalonic acidemia.
Lei LI ; Yanjie XIA ; Shuang HU ; Guiying CHENG ; Xiaofan ZHU ; Yang LIU ; Xiangdong KONG
Chinese Journal of Medical Genetics 2022;39(10):1058-1064
OBJECTIVE:
To detect variants of the MMACHC gene among 110 ethnic Han Chinese pedigrees affected with metabolic deficiency methylmalonic acidemia (MMA) of cobalamin C (cblC).
METHODS:
Peripheral blood samples were collected from the probands and their parents. Following DNA extraction, the coding regions of the MMACHC gene were subjected to PCR amplification, Sanger sequencing and quantitative PCR assaying. For 48 pedigrees, chorionic villus samples were taken for prenatal genetic diagnosis.
RESULTS:
Thirty five types of variants were detected among the 110 pedigrees, which included missense, nonsense, frameshifting, splicing variants and exonic deletions. Most variants have occurred in exons 4 (73.18%). The detection rate for c.609G>A (p.Trp203Ter) variant was the highest (33.64%), followed by c.658_660delAAG (12.27%), c.567dupT (9.09%) and c.80A>G (6.82%). Two variants, namely c.57_58insT (p.Gly20Trpfs*14) and c.505_506delAT (p.Ile169Argfs*12), were unreported previously and both were of frameshifting types. For the 48 pedigrees undergoing prenatal diagnosis, 14 fetuses were found to be normal, 24 have carried heterozygous variants, the remaining 10 have carried compound heterozygous or homozygous variants.
CONCLUSION
The discovery of the two novel variants has expanded the spectrum of the MMACHC gene variants among ethnic Han population. Above finding has provide a basis for the prenatal diagnosis and genetic counseling for the affected pedigrees.
Amino Acid Metabolism, Inborn Errors/genetics*
;
China
;
DNA
;
Female
;
Humans
;
Mutation
;
Oxidoreductases/genetics*
;
Pedigree
;
Pregnancy
;
Prenatal Diagnosis
;
Vitamin B 12/genetics*
6.Genetic testing and prenatal diagnosis for a Chinese pedigree affected with mitochondrial DNA depletion syndrome due to variant of MPV17 gene.
Ganye ZHAO ; Xiaoyan ZHAO ; Xuechao ZHAO ; Li'na LIU ; Conghui WANG ; Xiangdong KONG
Chinese Journal of Medical Genetics 2022;39(10):1085-1088
OBJECTIVE:
To explore the genetic etiology of a Chinese pedigree affected with infantile hepatitis syndrome.
METHODS:
Genes associated with liver diseases subjected to high-throughput sequencing. Candidate variants were validated by Sanger sequencing of the proband and his parents. The pathogenicity of the variants was analyzed through bioinformatic analysis.
RESULTS:
High-throughput sequencing revealed that the proband has harbored c.182T>C (p.F61S) and c.293C>T (p.P98L) variants of the MPV17 gene, which were verified by Sanger sequencing to be inherited from his parents. The variant c.182T>C (p.F61S) was unreported previously and predicted to be likely pathogenic by bioinformatic analysis.
CONCLUSION
The proband was caused by the compound heterozygous variations of MPV17 gene including c.182T>C (p.F61S) and c.293C>T (p.P98L). Discovery of the novel variant has enriched the spectrum of pathogenic variants of the MPV17 gene.
China
;
DNA, Mitochondrial/genetics*
;
Female
;
Genetic Testing
;
Humans
;
Membrane Proteins/genetics*
;
Metabolism, Inborn Errors/genetics*
;
Mitochondrial Proteins/genetics*
;
Mutation
;
Pedigree
;
Pregnancy
;
Prenatal Diagnosis
;
Syndrome
7.Application and the limitation of next generation sequencing for the diagnosis of methylmalonic acidemia.
Lisa SU ; Shuang HU ; Xiangdong KONG
Chinese Journal of Medical Genetics 2021;38(8):740-744
OBJECTIVE:
To identify genetic variants among patients with methylmalonic acidemia and provide genetic evidence for prenatal diagnosis.
METHODS:
Thirty-one probands and their parents were subjected to next generation sequencing (NGS). Suspected variants were verified by Sanger sequencing.
RESULTS:
25 probands or their parents were found to harbor previously known pathogenic or likely pathogenic variants, and three probands were found to carry heterozygous MMACHC exonic deletion. The overall diagnostic yield was 90.32%.
CONCLUSION
NGS can improve the detection rate for methylmalonic acidemia for its accuracy and efficiency, yet the detection of exonic deletion is required to further improve the diagnostic yield. The identification of specific variants provided evidence for prenatal diagnosis.
Amino Acid Metabolism, Inborn Errors/genetics*
;
Female
;
Heterozygote
;
High-Throughput Nucleotide Sequencing
;
Humans
;
Mutation
;
Oxidoreductases
;
Pregnancy
;
Prenatal Diagnosis
8.Newborn screening and variant analysis for methionine adenosyltransferase I/III deficiency.
Chunmei LIN ; Quanzhi ZHENG ; Mengyi JIANG ; Yiming LIN
Chinese Journal of Medical Genetics 2020;37(5):527-531
OBJECTIVE:
To summarize newborn screening for methionine adenosyltransferase I/III (MAT I/III) deficiency in Quanzhou region of Fujian Province.
METHODS:
A total of 364 545 neonates were screened for inherited metabolic diseases by tandem mass spectrometry. High-throughput next generation sequencing combined with Sanger sequencing was used to detect potential variants in newborns with MAT I/III deficiency. Pathogenicity of suspected variants was predicted by using MutationTaster and HSF software.
RESULTS:
Three newborns were identified with MAT I/III deficiency by newborn screening, which yielded an incidence rate of 1 in 121 515. Amino acid and acylcarnitine analysis suggested that the serum methionine of the three patients have increased to various extents. All patients showed normal growth and development during follow-up, and were found to carry MAT1A gene variants including two missense variants [c.776C>T (p.Ala259Val) and c.791G>A (p.Arg264His)] and a synonymous variant [c.360C>T (p.Cys120Cys)]. Among these, c.776C>T (p.Ala259Val) and c.791G>A (p.Arg264His) were known to be pathogenic, whereas c.360C>T (p.Cys120Cys) was a novel variant. Bioinformatics analysis suggested that this variant may alter RNA splicing and affect the structure and function of the MAT1A protein.
CONCLUSION
A systematic review of newborn screening for MAT I/III deficiency was provided. Discovery of the novel variant has enriched the variant profile of the MAT1A gene and provided a basis for the diagnosis of this disease.
Amino Acid Metabolism, Inborn Errors
;
diagnosis
;
China
;
Genetic Variation
;
Humans
;
Infant, Newborn
;
Methionine Adenosyltransferase
;
deficiency
;
genetics
;
Neonatal Screening
9.Renal replacement therapy in neonates with an inborn error of metabolism
Korean Journal of Pediatrics 2019;62(2):43-47
Hyperammonemia can be caused by several genetic inborn errors of metabolism including urea cycle defects, organic acidemias, fatty acid oxidation defects, and certain disorders of amino acid metabolism. High levels of ammonia are extremely neurotoxic, leading to astrocyte swelling, brain edema, coma, severe disability, and even death. Thus, emergency treatment for hyperammonemia must be initiated before a precise diagnosis is established. In neonates with hyperammonemia caused by an inborn error of metabolism, a few studies have suggested that peritoneal dialysis, intermittent hemodialysis, and continuous renal replacement therapy (RRT) are effective modalities for decreasing the plasma level of ammonia. In this review, we discuss the current literature related to the use of RRT for treating neonates with hyperammonemia caused by an inborn error of metabolism, including optimal prescriptions, prognosis, and outcomes. We also review the literature on new technologies and instrumentation for RRT in neonates
Ammonia
;
Astrocytes
;
Brain Edema
;
Coma
;
Diagnosis
;
Edema
;
Emergency Treatment
;
Humans
;
Hyperammonemia
;
Infant, Newborn
;
Metabolism
;
Metabolism, Inborn Errors
;
Peritoneal Dialysis
;
Plasma
;
Prescriptions
;
Prognosis
;
Renal Dialysis
;
Renal Replacement Therapy
;
Urea
10.Analysis of inborn error metabolism in 277 children with autism spectrum disorders from Hainan.
Haijie SHI ; Jie WANG ; Zhendong ZHAO
Chinese Journal of Medical Genetics 2019;36(9):870-873
OBJECTIVE:
To assess the value of dry blood spot tandem mass spectrometry for the diagnosis of autism spectrum disorder (ASD).
METHODS:
Peripheral blood samples of 277 autistic children were collected. Their amino acid and carnitine profiles were detected by liquid chromatography tandem mass spectrometry. Urine samples of suspected patients were collected for verification by gas chromatography mass spectrometry. Blood samples were also taken for genetic testing.
RESULTS:
Of the 277 children with ASD, 19 (6.9%) were suspected to be with inborn error of metabolism (IEM), which included 6 cases with amino acidemia, 9 with organic acidemia and 4 with fatty acidemia. Three cases of phenylketonuria, one case of homocysteinemia, one case of propionemia, one case of methylmalonic acidemia, one case of glutaric acidemia, one case of isovaleric acidemia, one case of argininemia, one case of citrullinemia I and four cases of primary carnitine deficiency were confirmed by genetic testing, which yielded an overall diagnostic rate of 5.1% (14/277).
CONCLUSION
Our result has provided further evidence for the co-occurrence of ASD and IEM. Tandem mass spectrometry has a great value for the diagnosis and treatment of ASD in childhood.
Amino Acid Metabolism, Inborn Errors
;
complications
;
diagnosis
;
Autism Spectrum Disorder
;
complications
;
diagnosis
;
Child
;
Dried Blood Spot Testing
;
Gas Chromatography-Mass Spectrometry
;
Humans
;
Metabolism, Inborn Errors
;
complications
;
diagnosis
;
Tandem Mass Spectrometry

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