1.Network pharmacology and animal experiments reveal molecular mechanisms of Cordyceps sinensis in ameliorating heart aging and injury in mice by regulating Nrf2/HO-1/NF-κB pathway.
Si-Yi LIU ; Yue TU ; Wei-Ming HE ; Wen-Jie LIU ; Kai-Zhi WEN ; Cheng-Juan LI ; Chao HAN ; Xin-Yu LIANG
China Journal of Chinese Materia Medica 2025;50(4):1063-1074
This study aims to explore the effects and mechanisms of the traditional Chinese medicine Cordyceps sinensis(CS) in ameliorating heart aging and injury in mice based on animal experiments and network pharmacology. A mouse model of heart aging was established by continuously subcutaneous injection of D-galactose(D-gal). Thirty mice were randomly assigned into a normal group, a model group, a low-dose CS(CS-L) group, a high-dose CS(CS-H) group, and a vitamin E(VE) group. Mice in these groups were administrated with normal saline, different doses of CS suspension, or VE suspension via gavage daily. After 60 days of treatment with D-gal and various drugs, all mice were euthanized, and blood and heart tissue samples were collected for determination of the indicators related to heart aging and injury in mice. Experimental results showed that both high and low doses of CS and VE ameliorated the aging phenotype, improved the heart index and myocardial enzyme spectrum, restored the expression levels of proteins associated with cell cycle arrest and senescence-associated secretory phenotypes(SASP), and alleviated the fibrosis and histopathological changes of the heart tissue in model mice. From the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform(TCMSP),259 active ingredients of CS were retrieved. From Gene Cards and OMIM, 2 568 targets related to heart aging were identified, and 133common targets shared by CS and heart aging were obtained. The Gene Ontology(GO) functional annotation and Kyoto Encyclopedia of Genes and Genomes( KEGG) pathway enrichment revealed that the pathways related to heart aging involved oxidative stress,apoptosis, inflammation-related signaling pathways, etc. The animal experiment results showed that both high and low doses of CS and VE ameliorated oxidative stress and apoptosis in the heart tissue to varying degrees in model mice. Additionally, CS-H and VE activated the nuclear factor E2-related factor 2(Nrf2)/heme oxygenase-1(HO-1) pathway and inhibited the expression of key proteins in the nuclear factor-κB(NF-κB) pathway in the heart tissue of model mice. In conclusion, this study demonstrated based on network pharmacology and animal experiments that CS may alleviate heart aging and injury in aging mice by reducing oxidative stress,apoptosis, and inflammation in the heart via the Nrf2/HO-1/NF-κB pathway.
Animals
;
Cordyceps/chemistry*
;
Mice
;
NF-E2-Related Factor 2/genetics*
;
NF-kappa B/genetics*
;
Aging/genetics*
;
Male
;
Signal Transduction/drug effects*
;
Network Pharmacology
;
Drugs, Chinese Herbal/pharmacology*
;
Heme Oxygenase-1/genetics*
;
Heart/drug effects*
;
Humans
;
Myocardium/metabolism*
;
Membrane Proteins/genetics*
2.MiR-1180 from bone marrow-derived mesenchymal stem cells induces glycolysis and chemoresistance in ovarian cancer cells by upregulating the Wnt signaling pathway.
Zhuo-Wei GU ; Yi-Feng HE ; Wen-Jing WANG ; Qi TIAN ; Wen DI
Journal of Zhejiang University. Science. B 2019;20(3):219-237
BACKGROUND:
Bone marrow-derived mesenchymal stem cells (BM-MSCs) play an important role in cancer development and progression. However, the mechanism by which they enhance the chemoresistance of ovarian cancer is unknown.
METHODS:
Conditioned media of BM-MSCs (BM-MSC-CM) were analyzed using a technique based on microRNA arrays. The most highly expressed microRNAs were selected for testing their effects on glycolysis and chemoresistance in SKOV3 and COC1 ovarian cancer cells. The targeted gene and related signaling pathway were investigated using in silico analysis and in vitro cancer cell models. Kaplan-Merier survival analysis was performed on a population of 59 patients enrolled to analyze the clinical significance of microRNA findings in the prognosis of ovarian cancer.
RESULTS:
MiR-1180 was the most abundant microRNA detected in BM-MSC-CM, which simultaneously induces glycolysis and chemoresistance (against cisplatin) in ovarian cancer cells. The secreted frizzled-related protein 1 (SFRP1) gene was identified as a major target of miR-1180. The overexpression of miR-1180 led to the activation of Wnt signaling and its downstream components, namely Wnt5a, β-catenin, c-Myc, and CyclinD1, which are responsible for glycolysis-induced chemoresistance. The miR-1180 level was inversely correlated with SFRP1 mRNA expression in ovarian cancer tissue. The overexpressed miR-1180 was associated with a poor prognosis for the long-term (96-month) survival of ovarian cancer patients.
CONCLUSIONS
BM-MSCs enhance the chemoresistance of ovarian cancer by releasing miR-1180. The released miR-1180 activates the Wnt signaling pathway in cancer cells by targeting SFRP1. The enhanced Wnt signaling upregulates the glycolytic level (i.e. Warburg effect), which reinforces the chemoresistance property of ovarian cancer cells.
Adenosine Triphosphate/chemistry*
;
Adult
;
Aged
;
Bone Marrow Cells/cytology*
;
Cell Line, Tumor
;
Cell Proliferation
;
Cells, Cultured
;
Drug Resistance, Neoplasm/genetics*
;
Female
;
Flow Cytometry
;
Follow-Up Studies
;
Glycolysis
;
Humans
;
Intercellular Signaling Peptides and Proteins/metabolism*
;
Membrane Proteins/metabolism*
;
Mesenchymal Stem Cells/cytology*
;
MicroRNAs/genetics*
;
Middle Aged
;
Multivariate Analysis
;
Ovarian Neoplasms/genetics*
;
Up-Regulation
;
Wnt Signaling Pathway
3.Two natural molecules preferentially inhibit azole-resistant Candida albicans with MDR1 hyperactivation.
Hong-Zhuo SHI ; Wen-Qiang CHANG ; Ming ZHANG ; Hong-Xiang LOU
Chinese Journal of Natural Medicines (English Ed.) 2019;17(3):209-217
Antifungal drug resistance is a significant clinical problem, and antifungal agents that can evade resistance are urgently needed. In infective niches, resistant organisms often co-existed with sensitive ones, or a subpopulation of antibiotic-susceptible organisms may evolve into resistant ones during antibiotic treatment and eventually dominate the whole population. In this study, we established a co-culture assay in which an azole-resistant Candida albicans strain was mixed with a susceptible strain labeled with green fluorescent protein to mimic in vivo conditions and screen for antifungal drugs. Fluconazole was used as a positive control to verify the validity of this co-culture assay. Five natural molecules exhibited antifungal activity against both susceptible and resistant C. albicans. Two of these compounds, retigeric acid B (RAB) and riccardin D (RD), preferentially inhibited C. albicans strains in which the efflux pump MDR1 was activated. This selectivity was attributed to greater intracellular accumulation of the drugs in the resistant strains. Changes in sterol and lipid compositions were observed in the resistant strains compared to the susceptible strain, and might increase cell permeability to RAB and RD. In addition, RAB and RD interfered with the sterol pathway, further aggregating the decrease in ergosterol in the sterol synthesis pathway in the MDR1-activated strains. Our findings here provide an alternative for combating resistant pathogenic fungi.
ATP-Binding Cassette Transporters
;
genetics
;
metabolism
;
Antifungal Agents
;
chemistry
;
metabolism
;
pharmacology
;
Azoles
;
pharmacology
;
Biosynthetic Pathways
;
drug effects
;
genetics
;
Candida albicans
;
chemistry
;
drug effects
;
metabolism
;
Cell Membrane
;
chemistry
;
metabolism
;
Coculture Techniques
;
Drug Resistance, Fungal
;
drug effects
;
Ergosterol
;
metabolism
;
Fungal Proteins
;
genetics
;
metabolism
;
Lipids
;
chemistry
;
Molecular Structure
;
Permeability
;
Phenyl Ethers
;
chemistry
;
metabolism
;
pharmacology
;
Sterols
;
chemistry
;
metabolism
;
Stilbenes
;
chemistry
;
metabolism
;
pharmacology
;
Triterpenes
;
chemistry
;
metabolism
;
pharmacology
4.The binding of a monoclonal antibody to the apical region of SCARB2 blocks EV71 infection.
Xuyuan ZHANG ; Pan YANG ; Nan WANG ; Jialong ZHANG ; Jingyun LI ; Hao GUO ; Xiangyun YIN ; Zihe RAO ; Xiangxi WANG ; Liguo ZHANG
Protein & Cell 2017;8(8):590-600
Entero virus 71 (EV71) causes hand, foot, and mouth disease (HFMD) and occasionally leads to severe neurological complications and even death. Scavenger receptor class B member 2 (SCARB2) is a functional receptor for EV71, that mediates viral attachment, internalization, and uncoating. However, the exact binding site of EV71 on SCARB2 is unknown. In this study, we generated a monoclonal antibody (mAb) that binds to human but not mouse SCARB2. It is named JL2, and it can effectively inhibit EV71 infection of target cells. Using a set of chimeras of human and mouse SCARB2, we identified that the region containing residues 77-113 of human SCARB2 contributes significantly to JL2 binding. The structure of the SCARB2-JL2 complex revealed that JL2 binds to the apical region of SCARB2 involving α-helices 2, 5, and 14. Our results provide new insights into the potential binding sites for EV71 on SCARB2 and the molecular mechanism of EV71 entry.
Amino Acid Sequence
;
Animals
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Antibodies, Monoclonal
;
chemistry
;
genetics
;
metabolism
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Binding Sites
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Cell Line
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Crystallography, X-Ray
;
Enterovirus A, Human
;
drug effects
;
genetics
;
growth & development
;
immunology
;
Fibroblasts
;
drug effects
;
virology
;
Gene Expression
;
HEK293 Cells
;
Humans
;
Immunoglobulin Fab Fragments
;
chemistry
;
genetics
;
metabolism
;
Lysosome-Associated Membrane Glycoproteins
;
chemistry
;
genetics
;
immunology
;
Mice
;
Models, Molecular
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Protein Binding
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Protein Conformation, alpha-Helical
;
Protein Conformation, beta-Strand
;
Protein Interaction Domains and Motifs
;
Receptors, Scavenger
;
chemistry
;
genetics
;
immunology
;
Receptors, Virus
;
chemistry
;
genetics
;
immunology
;
Recombinant Fusion Proteins
;
chemistry
;
genetics
;
immunology
;
Sequence Alignment
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Sequence Homology, Amino Acid
;
Sf9 Cells
;
Spodoptera
;
Thermodynamics
5.A Population-Based Genomic Study of Inherited Metabolic Diseases Detected Through Newborn Screening.
Kyoung Jin PARK ; Seungman PARK ; Eunhee LEE ; Jong Ho PARK ; June Hee PARK ; Hyung Doo PARK ; Soo Youn LEE ; Jong Won KIM
Annals of Laboratory Medicine 2016;36(6):561-572
BACKGROUND: A newborn screening (NBS) program has been utilized to detect asymptomatic newborns with inherited metabolic diseases (IMDs). There have been some bottlenecks such as false-positives and imprecision in the current NBS tests. To overcome these issues, we developed a multigene panel for IMD testing and investigated the utility of our integrated screening model in a routine NBS environment. We also evaluated the genetic epidemiologic characteristics of IMDs in a Korean population. METHODS: In total, 269 dried blood spots with positive results from current NBS tests were collected from 120,700 consecutive newborns. We screened 97 genes related to NBS in Korea and detected IMDs, using an integrated screening model based on biochemical tests and next-generation sequencing (NGS) called NewbornSeq. Haplotype analysis was conducted to detect founder effects. RESULTS: The overall positive rate of IMDs was 20%. We identified 10 additional newborns with preventable IMDs that would not have been detected prior to the implementation of our NGS-based platform NewbornSeq. The incidence of IMDs was approximately 1 in 2,235 births. Haplotype analysis demonstrated founder effects in p.Y138X in DUOXA2, p.R885Q in DUOX2, p.Y439C in PCCB, p.R285Pfs*2 in SLC25A13, and p.R224Q in GALT. CONCLUSIONS: Through a population-based study in the NBS environment, we highlight the screening and epidemiological implications of NGS. The integrated screening model will effectively contribute to public health by enabling faster and more accurate IMD detection through NBS. This study suggested founder mutations as an explanation for recurrent IMD-causing mutations in the Korean population.
Computational Biology
;
DNA/chemistry/isolation & purification/metabolism
;
Dried Blood Spot Testing
;
Galactokinase
;
Genomics
;
Haplotypes
;
High-Throughput Nucleotide Sequencing
;
Humans
;
Incidence
;
Infant, Newborn
;
Membrane Proteins/genetics
;
Metabolic Diseases/*diagnosis/epidemiology/genetics
;
Metabolism, Inborn Errors/diagnosis/epidemiology/genetics
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Mitochondrial Membrane Transport Proteins/genetics
;
Neonatal Screening
;
Polymorphism, Genetic
;
Republic of Korea/epidemiology
;
Sequence Analysis, DNA
6.First Report on Familial Hemophagocytic Lymphohistiocytosis with an Abnormal Immunophenotype and T Cell Monoclonality in Korea.
Sang Yong SHIN ; Kyunghoon LEE ; Mi Ae JANG ; Seung Tae LEE ; Keon Hee YOO ; Hong Hoe KOO ; Dae Shick KIM ; Hee Jin KIM ; Sun Hee KIM
Annals of Laboratory Medicine 2015;35(1):155-158
No abstract available.
Bone Marrow/metabolism/pathology
;
DNA Mutational Analysis
;
Gene Rearrangement, T-Lymphocyte
;
Humans
;
Immunophenotyping
;
Infant
;
Lymphohistiocytosis, Hemophagocytic/*diagnosis
;
Male
;
Membrane Proteins/chemistry/genetics
;
Polymorphism, Single-Stranded Conformational
;
Republic of Korea
;
T-Lymphocytes/immunology/*metabolism
7.Hypoxia Increases Epithelial Permeability in Human Nasal Epithelia.
Hyun Jin MIN ; Tae Hoon KIM ; Joo Heon YOON ; Chang Hoon KIM
Yonsei Medical Journal 2015;56(3):825-831
PURPOSE: The nasal mucosa is the first site to encounter pathogens, and it forms continuous barriers to various stimuli. This barrier function is very important in the innate defense mechanism. Additionally, inflammation of the nasal sinus is known to be a hypoxic condition. Here, we studied the effect of hypoxia on barrier function in normal human nasal epithelial (NHNE) cells. MATERIALS AND METHODS: The expression levels of various junction complex proteins were assessed in hypoxia-stimulated NHNE cells and human nasal mucosal tissues. We performed real-time polymerase chain reaction analysis, western blotting, and immunofluorescence assays to examine differences in the mRNA and protein expression of ZO-1, a tight junction protein, and E-cadherin in NHNE cells. Moreover, we evaluated the trans-epithelial resistance (TER) of NHNE cells under hypoxic conditions to check for changes in permeability. The expression of ZO-1 and E-cadherin was measured in human nasal mucosa samples by western blotting. RESULTS: Hypoxia time-dependently decreased the expression of ZO-1 and E-cadherin at the gene and protein levels. In addition, hypoxia decreased the TER of NHNE cells, which indicates increased permeability. Human nasal mucosa samples, which are supposed to be hypoxic, showed significantly decreased levels of ZO-1 and E-cadherin expression compared with control. CONCLUSION: Our results demonstrate that hypoxia altered the expression of junction complex molecules and increased epithelial permeability in human nasal epithelia. This suggests that hypoxia causes barrier dysfunction. Furthermore, it may be associated with innate immune dysfunction after encountering pathogens.
Anoxia/etiology/*metabolism
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Blotting, Western
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Cadherins/*analysis/genetics
;
Epithelium/chemistry/pathology
;
Humans
;
Membrane Proteins/*analysis
;
Nasal Mucosa/*chemistry/pathology/*secretion
;
Permeability/*radiation effects
;
RNA, Messenger/genetics/metabolism
;
Real-Time Polymerase Chain Reaction
;
Tight Junctions/*metabolism
;
Zonula Occludens-1 Protein
8.Gephyrin: a central GABAergic synapse organizer.
Experimental & Molecular Medicine 2015;47(4):e158-
Gephyrin is a central element that anchors, clusters and stabilizes glycine and gamma-aminobutyric acid type A receptors at inhibitory synapses of the mammalian brain. It self-assembles into a hexagonal lattice and interacts with various inhibitory synaptic proteins. Intriguingly, the clustering of gephyrin, which is regulated by multiple posttranslational modifications, is critical for inhibitory synapse formation and function. In this review, we summarize the basic properties of gephyrin and describe recent findings regarding its roles in inhibitory synapse formation, function and plasticity. We will also discuss the implications for the pathophysiology of brain disorders and raise the remaining open questions in this field.
Animals
;
Carrier Proteins/chemistry/genetics/*metabolism
;
Disease Susceptibility
;
GABAergic Neurons/*metabolism
;
Gene Expression Regulation
;
Humans
;
Membrane Proteins/chemistry/genetics/*metabolism
;
Protein Binding
;
Protein Interaction Domains and Motifs
;
Protein Processing, Post-Translational
;
Protein Transport
;
Synapses/*metabolism
9.Study on anti-hyperlipidemia mechanism of high frequency herb pairs by molecular docking method.
Lu-di JIANG ; Yu-su HE ; Xi CHEN ; Ou TAO ; Gong-Yu LI ; Yan-ling ZHANG
China Journal of Chinese Materia Medica 2015;40(12):2413-2419
Traditional Chinese medicine (TCM) has definitely clinical effect in treating hyperlipidemia, but the action mechanism still need to be explored. Based on consulting Chinese Pharmacopoeia (2010), all the lipid-lowering Chinese patent medicines were analyzed by associated rules data mining method to explore high frequency herb pairs. The top three couplet medicines with high support degree were Puerariae Lobatae Radix-Crataegi Fructus, Salviae Miltiorrhizae Radix et Rhizoma-Crataegi Fructus, and Polygoni Multiflori Radix-Crataegi Fructus. The 20 main ingredients were selected from the herb pairs and docked with 3 key hyperlipidemia targets, namely 3-hydroxy-3-methylglutaryl coenzyme A reductase (HMG-CoA reductase), peroxisome proliferator activated receptor-α (PPAR-α ) and niemann-pick C1 like 1 (NPC1L1) to further discuss the molecular mechanism of the high frequency herb pairs, by using the docking program, LibDock. To construct evaluation rules for the ingredients of herb pairs, the root-mean-square deviation (RMSD) value between computed and initial complexes was first calculated to validate the fitness of LibDock models. Then, the key residues were also confirmed by analyzing the interactions of those 3 proteins and corresponding marketed drugs. The docking results showed that hyperin, puerarin, salvianolic acid A and polydatin can interact with two targets, and the other five compounds may be potent for at least one of the three targets. In this study, the multi-target effect of high frequency herb pairs for lipid-lowering was discussed on the molecular level, which can help further researching new multi-target anti-hyperlipidemia drug.
Asteraceae
;
chemistry
;
Drugs, Chinese Herbal
;
chemistry
;
metabolism
;
Humans
;
Hydroxymethylglutaryl CoA Reductases
;
chemistry
;
genetics
;
metabolism
;
Hyperlipidemias
;
drug therapy
;
enzymology
;
genetics
;
metabolism
;
Hypolipidemic Agents
;
chemistry
;
metabolism
;
Membrane Proteins
;
chemistry
;
genetics
;
metabolism
;
Molecular Docking Simulation
;
PPAR alpha
;
chemistry
;
genetics
;
metabolism
;
Protein Binding
;
Pueraria
;
chemistry
10.Flavonoids of Echinps latifolius suppress Wnt signaling in adjuvant arthritis rats.
Cheng-Gui MIAO ; Jian XU ; Hu GAO ; Liang-Liang LIU ; Guo-Liang ZHOU ; Mei-Song QIN ; Jian-Zhong CHEN ; Cheng-Feng LI
China Journal of Chinese Materia Medica 2015;40(1):129-133
The role of flavonoids of Echinps latifolius (FELT) in Wnt signaling was investigated in adjuvant arthritis (AA) rats. The therapeutic effects of FELT on AA rats were detected by rat arthritis score and MTT. The effect of FELT gavage treatment on the Wnt signaling key gene β-catenin, C-myc and cyclin D1 in synovium from AA rats was detected by Real-time qPCR, and the effects of FELT gavage treatment on the upstream negative regulation gene SFRP 1,2,4,5 in synovium from AA rats were detected by Real-time qPCR. The results showed that FELT gavage treatment significantly inhibited arthritis score and MTT values in AA rats, significantly inhibited the expression of the Wnt signaling gene β-catenin, C-myc and cyclin D1, significantly up-regulated the expression of the up- stream negative regulation gene SFRP 1,2,4. FELT has a better therapeutic effect for AA rats.
Animals
;
Arthritis, Experimental
;
drug therapy
;
genetics
;
metabolism
;
Asteraceae
;
chemistry
;
Disease Models, Animal
;
Down-Regulation
;
drug effects
;
Drugs, Chinese Herbal
;
administration & dosage
;
Flavonoids
;
administration & dosage
;
Humans
;
Intercellular Signaling Peptides and Proteins
;
genetics
;
metabolism
;
Male
;
Membrane Proteins
;
genetics
;
metabolism
;
Rats
;
Rats, Sprague-Dawley
;
Signal Transduction
;
drug effects
;
Synovial Membrane
;
drug effects
;
metabolism
;
Wnt Signaling Pathway
;
drug effects
;
beta Catenin
;
metabolism

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