1.Promising improvement in infected Wound Healing in Type two Diabetic rats by Combined effects of conditioned medium of human adipose‑derived stem cells plus Photobiomodulation
Kaysan SOHRABI ; Houssein AHMADI ; Abdollah AMINI ; Behnaz AHRABI ; Atarodalsadat MOSTAFAVINIA ; Hamidreza OMIDI ; Mansooreh MIRZAEI ; Fatemeh Fadaei FATHABADY ; Mohammadjavad FRIDONI ; Maryam RAHMANNIA ; Sufan CHIEN ; Mohammad BAYAT
Laboratory Animal Research 2023;39(4):356-370
Background:
We aimed to examine the accompanying and solo impacts of conditioned medium of human adiposederived stem cells (h-ASC-COM) and photobiomodulation (PBM) on the maturation stage of an ischemic infected delayed-healing wound model (IIDHWM) of rats with type 2 diabetes (TIIDM).
Results:
Outcomes of the wound closure ratio (WCR) results, tensiometrical microbiological, and stereological assessment followed almost identical patterns. While the outcomes of h-ASC-COM + PBM, PBM only, and h-ASCCOM only regimes were significantly better for all evaluated methods than those of group 1(all, p < 0.001), PBM alone and h-ASC-COM + PBM therapy achieved superior results than h-ASC-COM only (ranged from p = 0.05 to p < 0.001). In terms of tensiometrical and stereological examinations, the results of h-ASC-COM + PBM experienced better results than the PBM only (all, p < 0.001).
Conclusions
h-ASC-COM + PBM, PBM, and h-ASC-COM cures expressively accelerated the maturation stage in the wound healing process of IIDHWM with MRSA in TIIDM rats by diminishing the inflammatory reaction, and the microbial flora of MRSA; and increasing wound strength, WCR, number of fibroblasts, and new blood vessels. While the h-ASC-COM + PBM and PBM were more suitable than the effect of h-ASC-COM, the results of h-ASCCOM + PBM were superior to PBM only.
2.Associations of Oxalate Consumption and Some Individual Habits with the Risk of Kidney Stones.
Nahid ZAINODINI ; Periklis DOUSDAMPANIS ; Zahra AHMADI ; Maryam MOHAMADI ; Alireza NAZARI
Chinese Medical Sciences Journal 2023;38(3):250-256
Kidney stone is a highly recurrent disease in the urinary tract system. Most kidney stones are calcium stones, usually consisting of either calcium oxalate or calcium phosphate. Supersaturation of soluble calcium, oxalate, phosphate, and citrate in the urine is the basis for calcium stone formation. Genetics, diet, low physical activity, and individual habits contribute to the formation of kidney stones. In this review, the associations of the risk of kidney stones with oxalate consumption and some individual habits, such as smoking, alcohol drinking, and opium consumption, are summarized.
Humans
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Calcium/urine*
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Oxalates
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Kidney Calculi/urine*
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Calcium Oxalate/urine*
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Habits
3.Anesthesia and analgesia for common research models of adult mice
Siavash AHMADI‑NOORBAKHSH ; Mohammad Farajli ABBASI ; Maedeh GHASEMI ; Gholamreza BAYAT ; Nahid DAVOODIAN ; Ehsan SHARIF‑PAGHALEH ; Seyedeh Mahsa POORMOOSAVI ; Melika RAFIZADEH ; Maryam MALEKI ; Hesamaddin SHIRZAD‑ASKI ; Hossein Kargar JAHROMI ; Masoomeh DADKHAH ; Bahman KHALVATI ; Tahereh SAFARI ; Mohammad Amin BEHMANESH ; Seyed Esmaeil KHOSHNAM ; Gholamreza HOUSHMAND ; Sayyed Alireza TALAEI
Laboratory Animal Research 2022;38(4):271-286
Anesthesia and analgesia are major components of many interventional studies on laboratory animals. However, various studies have shown improper reporting or use of anesthetics/analgesics in research proposals and published articles. In many cases, it seems “anesthesia” and “analgesia” are used interchangeably, while they are referring to two different concepts. Not only this is an unethical practice, but also it may be one of the reasons for the proven sub‑ optimal quality of many animal researches. This is a widespread problem among investigations on various species of animals. However, it could be imagined that it may be more prevalent for the most common species of laboratory animals, such as the laboratory mice. In this review, proper anesthetic/analgesic methods for routine procedures on laboratory mice are discussed. We considered the available literature and critically reviewed their anesthetic/analge‑ sic methods. Detailed dosing and pharmacological information for the relevant drugs are provided and some of the drugs’ side effects are discussed. This paper provides the necessary data for an informed choice of anesthetic/analge‑ sic methods in some routine procedures on laboratory mice.
4.Reliability of trauma coding with ICD-10.
Farkhondeh ASADI ; Maryam Ahmadi HOSSEINI ; Sohrab ALMASI
Chinese Journal of Traumatology 2022;25(2):102-106
PURPOSE:
The reliability of trauma coding is essential in establishing the reliable trauma data and adopting efficient control and monitoring policies. The present study aimed to determine the reliability of trauma coding in educational hospitals affiliated to Shahid Beheshti University of Medical Sciences, Iran.
METHODS:
In this descriptive cross-sectional study, 591 coded medical records with a trauma diagnosis in 2018 were selected and recoded by two coders. The reliability of trauma coding was calculated using Cohen's kappa. The data were recorded in a checklist, in which the validity of the content had been confirmed by experts.
RESULTS:
The reliability of the coding related to the nature of trauma in research units was 0.75-0.77, indicating moderate reliability. Also, the reliability of the coding of external causes of trauma was 0.57-0.58, suggesting poor reliability.
CONCLUSION
The reliability of trauma coding both in terms of the nature of trauma and the external causes of trauma does not have a good status in the research units. This can be due to the complex coding of trauma, poor documentation of the cases, and not studying the entire case. Therefore, holding training courses for coders, offering training on the accurate documentation to other service providers, and periodically auditing the medical coding are recommended.
Cross-Sectional Studies
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Hospitals, Teaching
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Humans
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International Classification of Diseases
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Medical Records
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Reproducibility of Results
5.Ontology for Symptomatic Treatment of Multiple Sclerosis
Misagh Zahiri ESFAHANI ; Maryam AHMADI ; Iman ADIBI
Healthcare Informatics Research 2022;28(4):332-342
Objectives:
Symptomatic treatment is an essential component in the overall treatment of multiple sclerosis (MS). However, knowledge in this regard is confusing and scattered. Physicians also have challenges in choosing symptomatic treatment based on the patient’s condition. To share, update, and reuse this knowledge, the aim of this study was to provide an ontology for MS symptomatic treatment.
Methods:
The Symptomatic Treatment of Multiple Sclerosis Ontology (STMSO) was developed according to Ontology Development 101 and a guideline for developing good ontologies in the biomedical domain. We obtained knowledge and rules through a systematic review and entered this knowledge in the form of classes and subclasses in the ontology. We then mapped the ontology using the Basic Formal Ontology (BFO) and Ontology for General Medical Sciences (OGMS) as reference ontologies. The ontology was built using Protégé Editor in the Web Ontology Language format. Finally, an evaluation was done by experts using criterion-based approaches in terms of accuracy, clarity, consistency, and completeness.
Results:
The knowledge extraction phase identified 110 articles related to the ontology in the form of 626 classes, 40 object properties, and 139 rules. Five general classes included “patient,” “symptoms,” “pharmacological treatment,” “treatment plan,” and “measurement index.” The evaluation in terms of standards for biomedical ontology showed that STMSO was accurate, clear, consistent, and complete.
Conclusions
STMSO is the first comprehensive semantic representation of the symptomatic treatment of MS and provides a major step toward the development of intelligent clinical decision support systems for symptomatic MS treatment.
6. Antimicrobial resistance patterns and prevalence of integrons in Shigella species isolated from children with diarrhea in southwest Iran
Nabi JOMEHZADEH ; Khadijeh AHMADI ; Maryam AFZALI ; Khadijeh AHMADI ; Shokrollah SALMANZADEH ; Fateme Jahangiri MEHR
Asian Pacific Journal of Tropical Medicine 2021;14(2):78-82
Objective: To investigate the antimicrobial resistance patterns and prevalence of integrons in Shigella species isolated from children with diarrhea in southwest Iran. Methods: In this study, 1 530 stool samples were collected from children under 15 years with diarrhea referred to teaching hospitals in Ahvaz and Abadan, southwest Iran. Shigella spp. were identified by standard biochemical tests and PCR. The antibiotic resistance pattern of all Shigella isolates was determined by the disk diffusion method and minimum inhibitory concentration (MIC) by E-test. Results: Of 1 530 stool samples, 91 (5.9%, 91/1 530) were positive for Shigella spp. the most common Shigella isolates were Shigella flexneri 47 (51.6%, 47/1 530). Antibiotic susceptibility tests showed that the highest antibiotic resistance was related to trimethoprim-sulfamethoxazole (87.9%, 80/91) and ampicillin (86.8%, 79/91). Multiplex PCR results revealed that 56% and 86.9% of Shigella isolates carried integron class I and integron class II genes, respectively. None of the isolates included the integron class III gene. Conclusions: The high prevalence of multi-drug resistance in Shigella isolates in our area increases the concerns about dissemination of the antibiotic-resistant isolates in this bacterium.
7.Comparison of ultrasonography and radiography in diagnosis of rib fractures.
Elham PISHBIN ; Koorosh AHMADI ; Molood FOOGARDI ; Maryam SALEHI ; Farrokh Seilanian TOOSI ; Vafa RAHIMI-MOVAGHAR
Chinese Journal of Traumatology 2017;20(4):226-228
PURPOSERib fractures are the most common skeletal thoracic injuries resulting from blunt chest trauma. Half of the rib fractures are not detected upon a precise physical evaluation and radiographs. Recently ultrasonography (USG) has been investigated to detect rib fractures. But based on literature the usefulness of USG varies widely. This study was conducted to investigate the role of USG in the detection of possible rib fractures in comparison with radiography.
METHODSIn this cross-sectional study, consecutive patients with minor blunt chest trauma and suspected rib fractures presenting in Imam Reza Hospital located in Mashhad-Iran, between April 2013 and October 2013 were assessed by USG and radiography. The radiography was performed in a posteroanterior (PA) chest projection and oblique rib view centered over the area of trauma. The time duration spent in taking USG and radiography were recorded. The prevalence and location of fractures revealed by USG and radiography were compared.
RESULTSSixty-one suspected patients were assessed. The male to female ratio was 2.4:1 (43 men and 18 women) with a mean ± SD age of (44.3 ± 19.7) years. There were totally 59 rib fractures in 38 (62.3%) patients based on radiography and USG, while 23 (37.7%) patients had no diagnostic evidence of rib lesions. USG revealed 58 rib fractures in 33 (54.1%) of 61 suspected patients and radiographs revealed 32 rib fractures in 20 (32.8%) of 61 patients. A total of 58 (98.3%) rib fractures were detected by USG, whereas oblique rib view and PA chest radiography showed 27 (45.8%) and 24 (40.7%) rib fractures, respectively. The average duration of USG was (12 ± 3) min (range 7-17 min), whereas the duration of radiography was (27 ± 6) min (range 15-37 min). The kappa coefficient showed a low level of agreement between both USG and PA chest radiography (kappa coefficient = 0.28), and between USG and oblique rib view (kappa coefficient = 0.32).
CONCLUSIONUSG discloses more fractures than radiography in most patients presenting with suspected rib fractures. Moreover USG requires significantly less time than radiography.
8.The insecticidal effect of diatomaceous earth against adults and nymphs of Blattella germanica.
Seyyed Akbar HOSSEINI ; Sahar BAZRAFKAN ; Hassan VATANDOOST ; Mohammad Reza ABAEI ; Mussa Soleimani AHMADI ; Maryam TAVASSOLI ; Mansoreh SHAYEGHI
Asian Pacific Journal of Tropical Biomedicine 2014;4(Suppl 1):S228-32
OBJECTIVETo evaluate the insecticidal effect of diatomaceous earth (DE) against adults and nymphs of Blattella germanica.
METHODSThis cross sectional study has been done on the laboratory strain of German cockroaches. Two stages, nymph and adult, were exposed to six dose rates of the DE, 2.5, 5, 10, 15, 20 and 25 g/m(2), at 24, 48 and 72 h exposure period. Mortality (number of dead cockroaches) was assessed after 24 h. Other exposed specimens were transferred to the beakers contained food and water for counting the retard mortality rate after 1 week.
RESULTSIncreasing in dose rates of DE increased mortality rate, so that the lowest and highest mortality rates were observed in 2.5 and 25 g/m(2), respectively. The results of the statistical analysis showed no significant difference in the lethality of 50% of DE plus water on the German cockroach nymphs.
CONCLUSIONSDue to the resistance of German cockroach against organochloride, organophosphorus, carbamate and pyrethriodes insecticides, it is suggested to use DE for insect's control.
9.Rapid detection of coliforms in drinking water of Arak city using multiplex PCR method in comparison with the standard method of culture (Most Probably Number).
Dehghan FATEMEH ; Zolfaghari Mohammad REZA ; Arjomandzadegan MOHAMMAD ; Kalantari SALOMEH ; Ahmari Gholam REZA ; Sarmadian HOSSEIN ; Sadrnia MARYAM ; Ahmadi AZAM ; Shojapoor MANA ; Najarian NEGIN ; Kasravi Alii REZA ; Falahat SAEED
Asian Pacific Journal of Tropical Biomedicine 2014;4(5):404-409
OBJECTIVETo analyse molecular detection of coliforms and shorten the time of PCR.
METHODSRapid detection of coliforms by amplification of lacZ and uidA genes in a multiplex PCR reaction was designed and performed in comparison with most probably number (MPN) method for 16 artificial and 101 field samples. The molecular method was also conducted on isolated coliforms from positive MPN samples; standard sample for verification of microbial method certificated reference material; isolated strains from certificated reference material and standard bacteria. The PCR and electrophoresis parameters were changed for reducing the operation time.
RESULTSResults of PCR for lacZ and uidA genes were similar in all of standard, operational and artificial samples and showed the 876 bp and 147 bp bands of lacZ and uidA genes by multiplex PCR. PCR results were confirmed by MPN culture method by sensitivity 86% (95% CI: 0.71-0.93). Also the total execution time, with a successful change of factors, was reduced to less than two and a half hour.
CONCLUSIONSMultiplex PCR method with shortened operation time was used for the simultaneous detection of total coliforms and Escherichia coli in distribution system of Arak city. It's recommended to be used at least as an initial screening test, and then the positive samples could be randomly tested by MPN.
10. Rapid detection of coliforms in drinking water of Arak city using multiplex PCR method in comparison with the standard method of culture (Most Probably Number)
Dehghan FATEMEH ; Zolfaghari Mohammad REZA ; Arjomandzadegan MOHAMMAD ; Sarmadian HOSSEIN ; Ahmadi AZAM ; Falahat SAEED ; Kalantari SALOMEH ; Ahmari Gholam REZA ; Sadrnia MARYAM ; Shojapoor MANA ; Najarian NEGIN ; Kasravi Alii REZA
Asian Pacific Journal of Tropical Biomedicine 2014;4(5):404-409
Objective: To analyse molecular detection of coliforms and shorten the time of PCR. Methods: Rapid detection of coliforms by amplification of lacZ and uidA genes in a multiplex PCR reaction was designed and performed in comparison with most probably number (MPN) method for 16 artificial and 101 field samples. The molecular method was also conducted on isolated coliforms from positive MPN samples; standard sample for verification of microbial method certificated reference material; isolated strains from certificated reference material and standard bacteria. The PCR and electrophoresis parameters were changed for reducing the operation time. Results: Results of PCR for lacZ and uidA genes were similar in all of standard, operational and artificial samples and showed the 876 bp and 147 bp bands of lacZ and uidA genes by multiplex PCR. PCR results were confirmed by MPN culture method by sensitivity 86% (95% CI: 0.71-0.93). Also the total execution time, with a successful change of factors, was reduced to less than two and a half hour. Conclusions: Multiplex PCR method with shortened operation time was used for the simultaneous detection of total coliforms and Escherichia coli in distribution system of Arak city. It's recommended to be used at least as an initial screening test, and then the positive samples could be randomly tested by MPN.

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