1.Sequence polymorphism and evolutionary analysis of HLA-A, -B, and -C loci in the northern Han Chinese population
Wenqian SONG ; Wanzhen YU ; Suning BAI ; Liying WANG ; Linnan SHAO ; Shihang ZHOU ; Xiaohua LIANG
Chinese Journal of Blood Transfusion 2026;39(6):743-749
Objective: To characterize the sequence polymorphism of HLA-A, -B, and -C loci in the northern Han Chinese population and to evaluate their selection signals and phylogenetic patterns based on long-read sequencing data. Methods: A total of 408 unrelated healthy blood donors were enrolled. Long-read sequencing of HLA-A, -B, and -C loci was performed using the PacBio Sequel II platform. The Ewens-Watterson neutrality test, sliding-window nucleotide diversity (π) and Tajima′s D analyses were conducted, together with genetic distance heatmaps, principal coordinates analysis (PCoA), and maximum likelihood phylogenetic analysis to assess polymorphism distribution, selection signals, and phylogenetic structure across the three loci. Results: The analyzed sequence lengths for the HLA-A, -B, and -C loci were 3 257 bp, 3 794 bp, and 3 831 bp, respectively; the numbers of locus-specific sequence types were 44, 82, and 56, with corresponding locus-specific sequence type diversities of 0.905 2, 0.964 9, and 0.939 8, respectively. The Ewens-Watterson test showed no significant deviation from neutrality (P>0.05). Sliding-window analysis revealed elevated π and Tajima′s D values in exons 2 and 3 as well as in certain intronic regions of HLA-A and HLA-B, whereas HLA-C exhibited relatively lower overall diversity. Genetic distance heatmaps, PCoA, and phylogenetic analysis consistently showed clear clustering in HLA-A and HLA-C, while HLA-B displayed the highest phylogenetic heterogeneity. Conclusion: HLA-A, -B, and -C gene sequences in the northern Chinese Han population exhibit high levels of polymorphism and marked regional heterogeneity. HLA-B shows greater diversity, stronger signals of selection, and more complex phylogenetic structure compared with HLA-A and HLA-C.
2.Evaluation of Treg/Th17 balance on relative risk of acute exacerbation in patients with chronic obstructive pulmonary disease
Yan ZHANG ; Liying SONG ; Jianwei WANG
Chinese Journal of Immunology 2025;41(11):2689-2694
Objective:To explore influence of Treg/Th17 balance on relative risk of acute exacerbation in patients with chronic obstructive pulmonary disease(COPD).Methods:A prospective cohort study was used to select 246 patients with COPD treated in emergency department of Beidaihe Hospital from January 2021 to January 2023,who were divided into acute aggravation group(113 cases)and stable group(133 cases)according to GOLD guidelines.Clinical indicators and lung function levels of two groups were compared,and risk variables of acute exacerbation in COPD patients were analyzed by Logistic multivariate regression.Restricted cubic spline model was used to analyze correlation between Treg/Th17 level and acute exacerbation in COPD patients.A line graph model was constructed and validation based on risk factors.The model was stratified according to risk score of column graph by X-tile software,and clinical application value of model was further discussed.Results:①Th17,IL-17,IL-22,C-reactive protein change rate(ΔCRP),procalcitonin change rate(ΔPCT)and TGF-β1 levels in acute aggravation group were significantly higher than stable group,Treg and Treg/Th17 levels were lower than stable group(P<0.05);②Multivariate Logistic regression analysis found that Treg≤9.06%,Th17≥2.23%,Treg/Th17≤5.27,ΔPCT≥0.845,ΔCRP≥0.554,IL-17≥37.55 ng/L,IL-22≥14.14 ng/L,TGF-β1≥840.56 ng/L were risk factors for COPD patients with acute exacerbation(P<0.05);③Restricted cubic spline model analysis showed that Treg/Th17 level was correlated with COPD acute exacerbation(χ2=7.214,P=0.001),and there was a linear dose-response relationship(χ2=3.542,P=0.112);④A line graph prediction model was constructed based on the above eight risk factors and evaluation results showed that C-index before and after verification were 0.864 and 0.831,respectively;AUC before and after validation were 0.856 and 0.832,respectively,and correction curve before and after validation fitted well with ideal curve.Clinical decision curve showed that when threshold probability was 0.01~0.91,higher net benefit could be obtained by this model;⑤Risk stratification showed that inci-dence of acute exacerbation in high risk group was significantly higher than medium and low risk groups(χ2=6.056,P=0.013).Con-clusion:Monitoring changes in peripheral blood Treg/Th17 cell balance provides a high reference value for acute exacerbations in patients with COPD.
3.A cross-sectional study of the characteristics of patients with pneumoconiosis complicated with chronic obstructive pulmonary disease
Yao CHEN ; Pingping SONG ; Yani WEI ; Liying TIAN ; Hua ZHANG ; Yongjian YAN
Chinese Journal of Industrial Hygiene and Occupational Diseases 2025;43(1):32-37
Objective:To analyze the characteristics of patients with pneumoconiosis complicated with chronic obstructive pulmonary disease (COPD), and to explore the comorbidity of pneumoconiosis and COPD and its influencing factors.Methods:From October to December 2022, 255 pneumoconiosis patients admitted to an occupational disease prevention and control hospital from January 2018 to December 2021 were selected as the study subjects. According to whether the pneumoconiosis patients were complicated with COPD or not, they were divided into pneumoconiosis and COPD comorbidity group and pneumoconiosis group. The general condition and dust exposure of the two groups of patients were analyzed, and the relationship between different types and different periods of pneumoconiosis and COPD comorbidity was analyzed by multivariate logistic regression.Results:A total of 255 subjects were collected, including 64 patients with comorbidity of pneumoconiosis and COPD, and the comorbidity rate was 25.1%. There were 186 males (72.9%) and 69 females (27.1%), ranging in age from 35 to 90 (63.79±11.79) years, and working age from 1 to 45 (20.31±10.57) years. The comorbidity of pneumoconiosis and COPD increased with the increase of working age (χ 2trend=8.19, P=0.004), and the comorbidity rate for COPD with working age of more than 30 years was 37.7% (23/61). The comorbidity rate of pneumoconiosis and COPD also increased with the increase of the stage of pneumoconiosis (χ 2trend=13.14, P<0.001), and the comorbidity rate of pneumoconiosis and COPD in the stage Ⅲ was as high as 44.0% (11/25). The cumulative dust exposure was negatively correlated with forced expiratory volume in one second/forced vital capacity (FEV 1/FVC), and the linear regression equation y=-0.04 x+78.4. Multivariate logistic regression analysis showed that the length of services ≥30 years ( OR=3.30, 95% CI: 1.15-9.52) and stageⅡ ( OR=3.05, 95% CI: 1.03-9.04) were the risk factors for comorbidity between pneumoconiosis and COPD ( P<0.05) . Conclusion:The comorbidity rate of pneumoconiosis and COPD is high. Working age, pneumoconiosis stage and cumulative dust exposure are the main influencing factors of pneumoconiosis and COPD comorbidity, so more attention should be paid to the comorbidity of pneumoconiosis and COPD.
4.Targeting the JAK2-STAT3-UCHL3-ENO1 axis suppresses glycolysis and enhances the sensitivity to 5-FU chemotherapy in TP53-mutant colorectal cancer.
Haisong XIN ; Zitong ZHAO ; Shichao GUO ; Ruoxi TIAN ; Liying MA ; Yang YANG ; Lianmei ZHAO ; Guanglin WANG ; Baokun LI ; Xuhua HU ; Yongmei SONG ; Guiying WANG
Acta Pharmaceutica Sinica B 2025;15(5):2529-2544
Approximately 60% of colorectal cancer (CRC) patients exhibit TP53 mutations, which are strongly associated with tumor progression, chemotherapy resistance, and an unfavorable prognosis. However, targeting p53 has historically been challenging, and currently, there are no approved p53-based therapeutics for clinical use worldwide. In this study, we discovered that ubiquitin carboxyl terminal hydrolase L3 (UCHL3) plays a crucial role in high-level glycolysis, enhanced stem-like properties, and 5-fluorouracil (5-FU) chemoresistance in TP53-mutant CRC by exerting its deubiquitinating enzyme activity to stabilize α-enolase (ENO1) protein. Notably, we identified a newly Food and Drug Administration (FDA)-approved drug, pacritinib, that potently suppresses UCHL3 expression by blocking the janus kinase 2 (JAK2)-signal transducer and activator of transcription 3 (STAT3) pathway in TP53-mutant CRC. Furthermore, Pacritinib was demonstrated to effectively inhibit glycolysis and improve the sensitivity to 5-FU chemotherapy in TP53-mutant CRC. Our findings suggest that targeting the JAK2-STAT3-UCHL3-ENO1 axis is a promising strategy to suppress glycolysis and enhance the efficacy of 5-FU chemotherapy in TP53-mutant CRC. Pacritinib shows potential for clinical application in the treatment of TP53-mutant CRC.
5.A cross-sectional study of the characteristics of patients with pneumoconiosis complicated with chronic obstructive pulmonary disease
Yao CHEN ; Pingping SONG ; Yani WEI ; Liying TIAN ; Hua ZHANG ; Yongjian YAN
Chinese Journal of Industrial Hygiene and Occupational Diseases 2025;43(1):32-37
Objective:To analyze the characteristics of patients with pneumoconiosis complicated with chronic obstructive pulmonary disease (COPD), and to explore the comorbidity of pneumoconiosis and COPD and its influencing factors.Methods:From October to December 2022, 255 pneumoconiosis patients admitted to an occupational disease prevention and control hospital from January 2018 to December 2021 were selected as the study subjects. According to whether the pneumoconiosis patients were complicated with COPD or not, they were divided into pneumoconiosis and COPD comorbidity group and pneumoconiosis group. The general condition and dust exposure of the two groups of patients were analyzed, and the relationship between different types and different periods of pneumoconiosis and COPD comorbidity was analyzed by multivariate logistic regression.Results:A total of 255 subjects were collected, including 64 patients with comorbidity of pneumoconiosis and COPD, and the comorbidity rate was 25.1%. There were 186 males (72.9%) and 69 females (27.1%), ranging in age from 35 to 90 (63.79±11.79) years, and working age from 1 to 45 (20.31±10.57) years. The comorbidity of pneumoconiosis and COPD increased with the increase of working age (χ 2trend=8.19, P=0.004), and the comorbidity rate for COPD with working age of more than 30 years was 37.7% (23/61). The comorbidity rate of pneumoconiosis and COPD also increased with the increase of the stage of pneumoconiosis (χ 2trend=13.14, P<0.001), and the comorbidity rate of pneumoconiosis and COPD in the stage Ⅲ was as high as 44.0% (11/25). The cumulative dust exposure was negatively correlated with forced expiratory volume in one second/forced vital capacity (FEV 1/FVC), and the linear regression equation y=-0.04 x+78.4. Multivariate logistic regression analysis showed that the length of services ≥30 years ( OR=3.30, 95% CI: 1.15-9.52) and stageⅡ ( OR=3.05, 95% CI: 1.03-9.04) were the risk factors for comorbidity between pneumoconiosis and COPD ( P<0.05) . Conclusion:The comorbidity rate of pneumoconiosis and COPD is high. Working age, pneumoconiosis stage and cumulative dust exposure are the main influencing factors of pneumoconiosis and COPD comorbidity, so more attention should be paid to the comorbidity of pneumoconiosis and COPD.
6.Evaluation of Treg/Th17 balance on relative risk of acute exacerbation in patients with chronic obstructive pulmonary disease
Yan ZHANG ; Liying SONG ; Jianwei WANG
Chinese Journal of Immunology 2025;41(11):2689-2694
Objective:To explore influence of Treg/Th17 balance on relative risk of acute exacerbation in patients with chronic obstructive pulmonary disease(COPD).Methods:A prospective cohort study was used to select 246 patients with COPD treated in emergency department of Beidaihe Hospital from January 2021 to January 2023,who were divided into acute aggravation group(113 cases)and stable group(133 cases)according to GOLD guidelines.Clinical indicators and lung function levels of two groups were compared,and risk variables of acute exacerbation in COPD patients were analyzed by Logistic multivariate regression.Restricted cubic spline model was used to analyze correlation between Treg/Th17 level and acute exacerbation in COPD patients.A line graph model was constructed and validation based on risk factors.The model was stratified according to risk score of column graph by X-tile software,and clinical application value of model was further discussed.Results:①Th17,IL-17,IL-22,C-reactive protein change rate(ΔCRP),procalcitonin change rate(ΔPCT)and TGF-β1 levels in acute aggravation group were significantly higher than stable group,Treg and Treg/Th17 levels were lower than stable group(P<0.05);②Multivariate Logistic regression analysis found that Treg≤9.06%,Th17≥2.23%,Treg/Th17≤5.27,ΔPCT≥0.845,ΔCRP≥0.554,IL-17≥37.55 ng/L,IL-22≥14.14 ng/L,TGF-β1≥840.56 ng/L were risk factors for COPD patients with acute exacerbation(P<0.05);③Restricted cubic spline model analysis showed that Treg/Th17 level was correlated with COPD acute exacerbation(χ2=7.214,P=0.001),and there was a linear dose-response relationship(χ2=3.542,P=0.112);④A line graph prediction model was constructed based on the above eight risk factors and evaluation results showed that C-index before and after verification were 0.864 and 0.831,respectively;AUC before and after validation were 0.856 and 0.832,respectively,and correction curve before and after validation fitted well with ideal curve.Clinical decision curve showed that when threshold probability was 0.01~0.91,higher net benefit could be obtained by this model;⑤Risk stratification showed that inci-dence of acute exacerbation in high risk group was significantly higher than medium and low risk groups(χ2=6.056,P=0.013).Con-clusion:Monitoring changes in peripheral blood Treg/Th17 cell balance provides a high reference value for acute exacerbations in patients with COPD.
7.Role of subminiature and recurrent chromosome copy number variations in recurrent spontaneous abortion
Erfeng YUAN ; Liying SONG ; Yu WANG ; Hongmei DU ; Yang FANG ; Jinshuang GAO ; Yaqing GUO ; Haiyang YU ; Qianqian SHI ; Xinjing YAN ; Linlin ZHANG
Chinese Journal of Reproduction and Contraception 2024;44(8):816-821
Objective:To explore the key copy number variation (CNV) regions, abortion candidate genes and signaling pathways associated with recurrent spontaneous abortion (RSA).Methods:A retrospective cohort study was conducted based on the data of 1 870 miscarriage cases of RSA patients who received CNV analysis by high-throughput sequencing technology in the Laboratory Medicine Department of the Third Affiliated Hospital of Zhengzhou University from January 2016 to September 2022. These cases were divided into different groups based on the age of miscarriage and gestational age of the pregnant women. Chi-square test or Fisher's exact test was used to analyze the distribution of chromosome abnormalities and CNV. Gene functions and signaling pathways in RSA-related CNV were identified by gene enrichment analysis.Results:Among the 1 870 tissues, 1 001 (53.53%) cases were detected with chromosomal abnormalities. A total of 140 CNVs were detected in 93 tissues (9.29%), including 34 submicroscopic CNVs (segment<10 Mb) and 106 large CNVs with segment≥10 Mb. Submicroscopic pathogenicity CNVs with statistical differences were involved 1p36.33p36.23, 2q37.3, 4p16.3, 22q11.21 (χ 2=6.99, P=0.008) in early RSA embryos (≤12 weeks). 16p11.2 and Xp11.23p11.22 microdeletion were firstly reported in abortion cases. Significantly recurrent large CNVs were mainly involved 18q22q23 (del/dup), 4p16p15, 9p24p22, 8p23p22, and Xp22.3 regions, and the candidate genes mainly concentrated on PI3K-Akt and JAK-STAT signaling pathway. Conclusion:Rare submicroscopic CNVs and recurrent large CNVs were associated with RSA in early pregnancy. GO and KEGG database analysis revealed potential abortion candidate genes and signaling pathways, providing new information for the genetic etiology of RSA.
8.The effect of treatment duration with human urinary kallidinogenase on the efficacy and safety of acute ischemic stroke: a subgroup analysis of RESK study
Jun NI ; Ming YAO ; Lihua WANG ; Ming YU ; Runhui LI ; Lihong ZHAO ; Jiachun WANG ; Yinzhou WANG ; Xin WANG ; Haiqing SONG ; Benyan LUO ; Jiawei WANG ; Yining HUANG ; Liying CUI
Chinese Journal of Neurology 2024;57(3):225-232
Objective:To explore the impact of treatment duration with human urinary kallidinogenase (HUK) on the efficacy and safety of acute ischemic stroke (AIS).Methods:In this subgroup analysis of RESK study, a total of 990 AIS patients recruited from 65 centers in China between August 2015 and June 2020 were included and divided into short medication group (HUK for 8 days, n=185) or long medication group (HUK for 15 days or 21 days, n=805). The proportions of patients with modified Rankin Scale (mRS) score of 0, 0-1, 0-2 at 90 days, National Institutes of Health Stroke Scale (NIHSS) score change from baseline to 22 days, the proportions of patients with Barthel index (BI)≥95 at 90 days, and the incidences of adverse events were analyzed. Comparisons between groups were conducted using chi-square test, single factor and multivariate Logistic regression analysis, etc. Results:Multivariate regression analysis showed that the proportions of patients with 90-day mRS score of 0-2 [74.1% (137/185) vs 75.0% (604/805); OR=1.047, 95% CI 0.676-1.620, P=0.838] and 22-day NIHSS score change from baseline (4.60±2.00 vs 4.26±2.80; OR=-0.390, 95% CI -1.125-0.344, P=0.297) showed no statistically significant difference between the short medication and long medication groups; the proportions of patients with 90-day mRS score of 0-1 [48.1% (89/185) vs 59.1% (476/805); OR=0.674, 95%CI 0.463-0.983, P=0.041] and 90-day BI≥95 [43.6% (79/181) vs 55.1% (442/802); OR=0.614, 95%CI 0.420-0.897, P=0.012] were significantly lower in the short medication group than in the long medication group. There was no statistically significant difference in the incidences of adverse events between these 2 groups. Conclusions:In AIS patients, consecutive 8-day dosing of HUK improved immediate (22-day NIHSS score) and long-term outcome (90-day mRS score 0-2) and was safely tolerated. When applicable, extended duration of HUK could improve long-term disability-free rate (90-day mRS score 0-1) and quality of life (90-day BI) without increasing the risk of adverse events.
9.A Case Report of Clinical Characteristics of Deficiency of Adenosine Deaminase 2 with Pancytopenia
Caihui ZHANG ; Liying LIU ; Zhenjie ZHANG ; Wei WANG ; Mingsheng MA ; Hongmei SONG
JOURNAL OF RARE DISEASES 2024;3(4):501-506
Deficiency of adenosine deaminase 2(DADA2) is a rare monogenic autoinflammatory disorder caused by genetic variations in the
10.Determination of non-steroidal anti-inflammatory drugs in the environmental water samples by a polyvinylimide-modified magnetic nanoparticles-based solid phase extraction coupled with high-performance liquid chromatography
Xiaohang TANG ; Huilin SONG ; Liying YAO ; Guowen QIN ; Xingchen WANG ; Wenyuan LIU ; Shunli JI
Journal of China Pharmaceutical University 2024;55(4):485-492
The long-term presence of non-steroidal anti-inflammatory drugs (NSAIDs) in the environmental water samples not only affects the life safety of aquatic organisms and disturbs the ecoenvironment, but also poses a serious threat to human health. In this study, amino-functionalized Fe3O4 nanoparticles (Fe3O4-NH2) were firstly prepared by solvothermal method. Subsequently, polyethyleneimine (PEI) with a branched chain structure was successfully grafted onto Fe3O4 nanoparticles by Schiff base reaction in aqueous solution at room temperature using glutaraldehyde as a cross-linking agent, and a recyclable PEI-grafted magnetic nano-sorbent (Fe3O4@PEI) was synthesized and applied for the detection of NSAIDs in the environmental water samples. The compositional properties of Fe3O4@PEI were investigated by different characterization methods and the parameters affecting the extraction of NSAIDs were optimized. Due to high adsorption of Fe3O4@PEI for NSAIDs, the quantitative analysis of four NSAIDs in the environmental water samples, ketoprofen, naproxen, diclofenac and tolfenamic acid, was performed in combination with high-performance liquid chromatography. A good linear relationship between the chromatographic peak area and concentration was observed in the range of 1−500 µg/mL. The recoveries of the samples at three different spiked levels ranged from 85.6% to 107.8%; the intra-day precision was less than 7.8% (n=6); and the inter-day precision was less than 9.5% (n=3). The method is simple, rapid, accurate and reliable, and can be used for the analysis of NSAIDs in the environmental water samples.

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