1.Principle and development of single base editing technology and its application in livestock breeding.
Yingbing ZHANG ; Chengtu ZHANG ; Ying WU ; Ruiluan YU ; Jianmin SU
Chinese Journal of Biotechnology 2023;39(1):19-33
CRISPR/Cas (clustered regularly interspaced short palindromic repeats/CRISPR-associated protein) is widely used in the field of livestock breeding. However, its low efficiency, untargeted cutting and low safety have greatly hampered its use for introducing single base mutations in livestock breeding. Single base editing, as a new gene editing tool, can directly replace bases without introducing double strand breaks. Single base editing shows high efficiency and strong specificity, and provides a simpler and more effective method for precise gene modification in livestock breeding. This paper introduces the principle and development of single base editing technology and its application in livestock breeding.
Animals
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Gene Editing
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CRISPR-Cas Systems/genetics*
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Livestock/genetics*
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Mutation
;
Technology
2.Livestock-associated methicillin-resistant Staphylococcus aureus in Korea: antimicrobial resistance and molecular characteristics of LA-MRSA strains isolated from pigs, pig farmers, and farm environment
Seung Hyun BACK ; Hong Sik EOM ; Haeng Ho LEE ; Gi Yong LEE ; Kun Taek PARK ; Soo Jin YANG
Journal of Veterinary Science 2020;21(1):2-
livestock-associated (LA)-methicillin-resistant Staphylococcus aureus (MRSA) in livestock animal has become a significant zoonotic concern. In the present study, we investigated nationwide prevalence of LA-MRSA across pork production chain including pig farms, slaughterhouses, and retail markets. A total of 40 MRSA strains were isolated during the investigation and the overall prevalence of MRSA was 3.4% (n = 37), 0.6% (n = 2), and 0.4% (n = 1) in pig farms, slaughterhouses, and retail markets, respectively. Multilocus sequence typing analyses revealed that the 2 most significant clonal lineages in pork production chain in Korea were ST398 (n = 25) and ST541 (n = 6). All of the 40 MRSA isolates were further characterized to investigate key genotypic and phenotypic correlates associated with the emergence and spread of clonal complex 398 (CC398; ST398, and ST541) LA-MRSA. Although the prevalence of swine-associated MRSA was still relatively low and mostly restricted to pig farms, multidrug-resistant CC398 LA-MRSA isolates with new spa types (t18102 and t18103) were identified as a major clonal lineage. The CC398 LA-MRSA strains tended to exhibit increased levels of multiple drug resistance (MDR) phenotype compared with non-CC398 MRSA strains. Of note, in comparison with non-CC398 MRSA isolates, CC398 LA-MRSA isolates exhibited significantly enhanced tetracycline (TET) and zinc resistance. These findings suggested that co-selection pressure associated with MDR phenotype, especially TET resistance, and zinc resistance may have played a significant role in the emergence and persistence of CC398 LA-MRSA in pig farms in Korea.]]>
Abattoirs
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Agriculture
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Animals
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Drug Resistance, Multiple
;
Farmers
;
Korea
;
Livestock
;
Methicillin Resistance
;
Methicillin-Resistant Staphylococcus aureus
;
Multilocus Sequence Typing
;
Phenotype
;
Prevalence
;
Red Meat
;
Staphylococcus aureus
;
Swine
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Tetracycline
;
Zinc
3.Progress in Chinese medicine-probiotics compound microecological preparations for livestock and poultry.
Rui WANG ; Wentao CAI ; Xiliang WANG ; Jin GAO ; Man HUANG
Chinese Journal of Biotechnology 2019;35(6):972-987
Chinese medicine-probiotics compound microecological preparation for livestock and poultry is a new type of animal microecological preparations that combine probiotics with traditional Chinese medicine by modern fermentation technology. It could exert synergistic effects of both probiotics and traditional Chinese medicine, with the purpose of improving immune function of livestock and poultry and protect their health. By investigating the literature on probiotics and Chinese medicine microecological preparations in recent years, we summarized the background and strain characteristics of Chinese medicine-probiotics compound microecological preparations (CPCMP) for livestock and poultry in this paper. Furthermore, we elaborated the mechanisms of CPCMP for livestock and poultry and introduced the application of CPCMP in livestock and poultry breeding. Finally, we pointed out the existing problems and proposed the suggestions on the development of CPCMP. This review is expected to provide reference and basis for further research on CPCMP for livestock and poultry.
Animals
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Fermentation
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Livestock
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Medicine, Chinese Traditional
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Poultry
;
Probiotics
4.Specification of Bacteriophage Isolated Against Clinical Methicillin-Resistant Staphylococcus Aureus
Ahmad NASSER ; Reza AZIZIAN ; Mohsen TABASI ; Jamil Kheirvari KHEZERLOO ; Fatemah Sadeghpour HERAVI ; Morovat Taheri KALANI ; Norkhoda SADEGHIFARD ; Razieh AMINI ; Iraj PAKZAD ; Amin RADMANESH ; Farid Azizi JALILIAN
Osong Public Health and Research Perspectives 2019;10(1):20-24
OBJECTIVES: The emergence of resistant bacteria is being increasingly reported around the world, potentially threatening millions of lives. Amongst resistant bacteria, methicillin-resistant Staphylococcus aureus (MRSA) is the most challenging to treat. This is due to emergent MRSA strains and less effective traditional antibiotic therapies to Staphylococcal infections. The use of bacteriophages (phages) against MRSA is a new, potential alternate therapy. In this study, morphology, genetic and protein structure of lytic phages against MRSA have been analysed. METHODS: Isolation of livestock and sewage bacteriophages were performed using 0.4 μm membrane filters. Plaque assays were used to determine phage quantification by double layer agar method. Pure plaques were then amplified for further characterization. Sulfate-polyacrylamide gel electrophoresis and random amplification of polymorphic DNA were run for protein evaluation, and genotyping respectively. Transmission electron microscope was also used to detect the structure and taxonomic classification of phage visually. RESULTS: Head and tail morphology of bacteriophages against MRSA were identified by transmission electron microscopy and assigned to the Siphoviridae family and the Caudovirales order. CONCLUSION: Bacteriophages are the most abundant microorganism on Earth and coexist with the bacterial population. They can destroy bacterial cells successfully and effectively. They cannot enter mammalian cells which saves the eukaryotic cells from lytic phage activity. In conclusion, phage therapy may have many potential applications in microbiology and human medicine with no side effect on eukaryotic cells.
Agar
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Bacteria
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Bacteriophages
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Caudovirales
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Classification
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DNA
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Electrophoresis
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Eukaryotic Cells
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Head
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Humans
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Livestock
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Membranes
;
Methicillin Resistance
;
Methicillin-Resistant Staphylococcus aureus
;
Methods
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Microscopy, Electron, Scanning Transmission
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Microscopy, Electron, Transmission
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Sewage
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Siphoviridae
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Staphylococcal Infections
;
Tail
5.Molecular Detection of Coxiella burnetii in Cattle on Ulleung Island, Korea: A Population-based Study with Four Years of Follow Up
Min Goo SEO ; Oh Deog KWON ; Dongmi KWAK
The Korean Journal of Parasitology 2019;57(1):69-73
In a population-based study with 4 years of follow up, we evaluated the prevalence of Coxiella burnetii in cattle on Ulleung Island, Korea. In this study, the rates of C. burnetii infection in cattle on Ulleung Island were determined by PCR and were found to be 0.3–1.0% in the period 2011–2014. All 17 C. burnetii partial 16S rRNA gene sequences from PCR-positive cattle were identical and 2 geographic representatives were included in our analysis. The nucleotide sequences of the 2 samples showed high (98.4–100%) identity with C. burnetii sequences obtained from the GenBank. In this long-term tracking study, the number of cattle positive for C. burnetii on Ulleung Island was low. To prevent the transmission of C. burnetii on Ulleung Island, control strategy should include biosecurity improvement in surveillance, livestock management, administering suitable tests before purchasing animals to detect C. burnetii shedders, and restricting movements between herds.
Animals
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Base Sequence
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Cattle
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Coxiella burnetii
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Coxiella
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Databases, Nucleic Acid
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Follow-Up Studies
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Genes, rRNA
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Korea
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Livestock
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Phylogeny
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Polymerase Chain Reaction
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Prevalence
6.Development of a smartphone application for providing disinfectant information on livestock industry
Hansung CHUNG ; Su kwon KIM ; Kwanghoon CHOI ; Ji Heon PARK ; Swe Lynn HTET ; Nonghoon CHOE
Korean Journal of Veterinary Research 2019;59(2):97-100
It is important to select the correct disinfectants and to use them appropriately in order to prevent the initial spread of highly infectious livestock disease, such as foot-and-mouth disease or highly pathogenic avian influenza. This study describes a smartphone application developed to enable livestock workers to observe information related to disinfectants for the prevention of livestock disease in the domestic market, regardless of time and location, through a Linux-based Android mobile platform. This application (Konkuk-Disinfectant Information Database) provides information on disinfectant names, components, license and use; it was designed to enable the user to share disinfectant information through social media.
Animals
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Disinfectants
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Foot-and-Mouth Disease
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Influenza in Birds
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Licensure
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Livestock
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Methyltestosterone
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Smartphone
;
Social Media
7.The Occurrence and Risk Assessment of Exposure to Aflatoxin M₁ in Ultra-High Temperature and Pasteurized Milk in Hamadan Province of Iran
Amir Sasan Mozaffari NEJAD ; Ali HESHMATI ; Tayebe GHIASVAND
Osong Public Health and Research Perspectives 2019;10(4):228-233
OBJECTIVES: Aflatoxins are a category of poisonous compounds found in most plants, milk and dairy products. The present research was carried out to detect the presence of aflatoxin M₁ (AFM₁) in samples of milk collected from Hamadan province, Iran. METHODS: Twenty five samples of ultra-high temperature (UHT) and 63 samples of pasteurized milk were collected and the amount of AFM₁ was measured by an Enzyme-Linked Immunosorbent Assay method. In addition, the estimated daily intake (EDI) and hazard index (HI) of AFM₁ was determined by the following equations:(EDI= mean concentration of AFM₁ × daily consumption of milk/body weight; HI=EDI/Tolerance Daily Intake). RESULTS: AFM₁ was detected in 21 (84%) UHT milk samples and in 55 (87.30%) pasteurized milk samples. Seven (28%) samples of UHT and 21 (33.33%) pasteurized milk samples had higher AFM₁ content than the limit allowed in the European Union and Iranian National Standard Limits (0.05 μg/kg). None of the samples exceeded the US Food and Drug Administration limit (0.5 μg/kg) for AFM₁. EDI and HI for AM₁ through milk were 0.107 ng/kg body weight/day, and 0.535, respectively. CONCLUSION: A significant percentage of milk produced by different factories in Iran (84% of UHT and 87.3% of pasteurized milk) was contaminated with AFM₁. Therefore, more control and monitoring of livestock feeding in dairy companies may help reduce milk contamination with AFM₁. As the HI value was lower than 1, it can be assumed that there was no risk of developing liver cancer due to milk consumption.
Aflatoxins
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Dairy Products
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Enzyme-Linked Immunosorbent Assay
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European Union
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Iran
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Liver Neoplasms
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Livestock
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Methods
;
Milk
;
Risk Assessment
;
United States Food and Drug Administration
8.Prevalence and Molecular Characterization of Echinococcus granulosus Sensu Stricto in Northern Xinjiang, China
Baoping GUO ; Zhuangzhi ZHANG ; Xueting ZHENG ; Yongzhong GUO ; Gang GUO ; Li ZHAO ; Ren CAI ; Bingjie WANG ; Mei YANG ; Xi SHOU ; Wenbao ZHANG ; Bin JIA
The Korean Journal of Parasitology 2019;57(2):153-159
Echinococcus granulosus is an important zoonotic parasite globally causing cystic echinococcosis (CE) in humans and animals. In this study, prevalence of CE and variation of cox1 gene sequence were analyzed with isolates E. granulosus collected from different areas in northern Xinjiang, China. The survey showed that 3.5% of sheep and 4.1% of cattle were infected with CE. Fragment of cox1 was amplified from all the positive sheep and cattle samples by PCR. In addition, 26 positive samples across the 4 areas were included. The isolates were all E. granulosus sensu stricto (s.s.) containing 15 haplotypes (Hap1-15), and clustered into 2 genotypes, G1 (90.1%, 91/101) and G3 (9.9%, 10/101). Hap1 was the most common haplotype (48.5%, 49/101). Hap9 were found in humans samples, indicating that sheep and cattle reservoir human CE. It is indicate that E. granulosus may impact on control of CE in livestock and humans in the region.
Animals
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Cattle
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China
;
Cross-Sectional Studies
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Echinococcosis
;
Echinococcus granulosus
;
Echinococcus
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Genotype
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Haplotypes
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Humans
;
Livestock
;
Parasites
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Polymerase Chain Reaction
;
Prevalence
;
Sheep
9.Ten Cases of Taenia saginata Infection Confirmed by Analysis of the Internal Transcribed Spacer 1 rDNA Region in the Republic of Korea
Su Min SONG ; Hae Soo YUN ; Dorene VANBIK ; Hyun Ha CHANG ; Sang Ah LEE ; Shin Woo KIM ; Namhee RYOO ; Dong Yeub EUN ; Nan Young LEE ; Youn Kyoung GOO ; Yeonchul HONG ; Meesun OCK ; Hee Jae CHA ; Dong Il CHUNG
The Korean Journal of Parasitology 2019;57(4):417-422
From October 2015 to August 2018, tapeworm proglottids were obtained from 10 patients who were residents of Daegu and Gyeongbuk provinces and had a history of raw beef consumption. Most of them had no overseas travel experience. The gravid proglottids obtained from the 10 cases had 15–20 lateral uterine branches. A part of internal transcribed spacer 1 (ITS1) DNA of the 10 cases, amplified by polymerase chain reaction (PCR) and digested with AleI restriction enzyme, produced the same band pattern of Taenia saginata, which differentiated from T. asiatica and T. solium. Sequences of ITS1 and cytochrome c oxidase subunit 1 (cox1) showed higher homology to T. saginata than to T. asiatica and T. solium. Collectively, these 10 cases were identified as T. saginata human infections. As taeniasis is one of the important parasitic diseases in humans, it is necessary to maintain hygienic conditions during livestock farming to avoid public health concerns.
Agriculture
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Cestoda
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Daegu
;
DNA
;
DNA, Ribosomal
;
Electron Transport Complex IV
;
Gyeongsangbuk-do
;
Humans
;
Livestock
;
Parasitic Diseases
;
Polymerase Chain Reaction
;
Public Health
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Red Meat
;
Republic of Korea
;
Taenia saginata
;
Taenia
;
Taeniasis
10.Future Management Strategies for Zoonoses Based on One Health
Journal of Agricultural Medicine & Community Health 2019;44(1):39-42
Zoonoses are the diseases that are transmitted to human being from vertebrate animals either from livestock animals or from wildlife. Recently, zoonoses are increasingly common as a result of incremental human-animal contact. Propagative infections in wild animals and livestock are transmitted to human beings who are encountered with them. In general, wild animals can transmit infectious agents to livestock, and then livestock further transmit them to human being is a simple model of on how zoonotic diseases get transmitted to human being. This model emphasizes the importance of early detection of zoonoses by surveillance at its incipient stage. Cooperation between the respective ministries plays an important role in the identification of zoonoses and planning for the formulation of better preventive and control policy and strategy. We will be able to predict the occurrence of zoonotic diseases in human on the basis of disease trends in wildlife and livestock once when we obtain the surveillance data and data generated by respective ministries through sound cooperation and collaboration.
Animals
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Animals, Wild
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Cooperative Behavior
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Humans
;
Livestock
;
Vertebrates
;
Zoonoses

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