1.Identification of biomarkers to response of Tripterygium Glycosides Tablets acting on rheumatoid arthritis by integrating transcriptional data mining and biomolecular network analysis.
Xiao-Yue WANG ; Hai-Long WANG ; Xia MAO ; Guang-Yao LI ; Qiu-Yan GUO ; Wei-Jie LI ; Min-Qun GUO ; Quan JIANG ; Yan-Qiong ZHANG ; Na LIN
China Journal of Chinese Materia Medica 2019;44(16):3415-3422
Growing clinical evidence shows that a partial rheumatoid arthritis( RA) patient treated with Tripterygium Glycosides Tablets( TGT) may fail to achieve clinical improvement. It is of great clinical significance to predict the therapeutic effect of TGT in RA. Therefore,the aim of the current study was to identify potential biomarkers for TGT treatment in RA. Affymetrix EG1.0 arrays were applied to detect gene expression in peripheral blood mononuclear cells obtained from 6 RA patients( 3 responders and 3 non-responders) treated with TGT. By integrating differential expression data analysis and biomolecular network analysis,360 mRNAs( 185 up-regulated and 175 down-regulated) and 24 miRNAs( 7 up-regulated and 17 down-regulated) which were differentially expressed between TGT responder and non-responder groups were identified. A total of 206 candidate target genes for the differentially expressed miRNAs were obtained based on miRanada and Target Scan databases,and then the miRNA target gene coexpression network and miRNA-mediated gene signal transduction network were constructed. Following the network analyses,three candidate miRNAs biomarkers( hsa-miR-4720-5 p,hsa-miR-374 b-5 p,hsa-miR-185-3 p) were identified as candidate biomarkers predicting individual response to TGT. Partialleast-squares( PLS) was applied to construct a model for predicting response to TGT based on the expression levels of the candidate gene biomarkers in RA patients. The five-fold cross-validation showed that the prediction accuracy( ACC) of this PLS-based model efficacy was 100.00%,100.00%,100.00%,66.67% and 66.67% respectively,and all the area under the receiver operating characteristic curve( AUC) were 1.00,indicating the highly predictive efficiency of this PLS-based model. In conclusion,the integrating transcription data mining and biomolecular network investigation show that hsa-mir-4720-5 p,hsa-mir-374 b-5 p and hsa-mir-185-3 p may be candidate biomarkers predicting individual response to TGT. In addition,the PLS model based on the expression levels of these candidate biomarkers may be helpful for the clinical screen of RA patients,which potentially benefit individualized therapy of RA in a daily clinical setting.
Arthritis, Rheumatoid
;
drug therapy
;
Biomarkers
;
Data Mining
;
Drugs, Chinese Herbal
;
therapeutic use
;
Glycosides
;
therapeutic use
;
Humans
;
Leukocytes, Mononuclear
;
MicroRNAs
;
genetics
;
Tablets
;
Tripterygium
;
chemistry
2.Astragalus membranaceus improves therapeutic efficacy of asthmatic children by regulating the balance of Treg/Th17 cells.
Wei WANG ; Qing-Bin LIU ; Wei JING
Chinese Journal of Natural Medicines (English Ed.) 2019;17(4):252-263
Astragalus membranaceus may be a potential therapy for childhood asthma but its driving mechanism remains elusive. The main components of A. membranaceus were identified by HPLC. The children with asthma remission were divided into two combination group (control group, the combination of budesonide and terbutaline) and A. membranaceus group (treatment group, the combination of budesonide, terbutaline and A. membranaceus). The therapeutic results were compared between two groups after 3-month therapy. Porcine peripheral blood mononuclear cells (PBMCs) were isolated from venous blood by using density gradient centrifugation on percoll. The levels of FoxP3, EGF-β, IL-17 and IL-23 from PBMCs and serum IgE were measured. The relative percentage of Treg/Th17 cells was determined using flow cytometry. The main components of A. membranaceus were calycosin-7-O-glucoside, isoquercitrin, ononin, calycosin, quercetin, genistein, kaempferol, isorhamnetin and formononetin, all of which may contribute to asthma therapy. Lung function was significantly improved in the treatment group when compared with a control group (P < 0.05). The efficacy in preventing the occurrence of childhood asthma was higher in the treatment group than the control group (P < 0.05). The levels of IgE, IL-17 and IL-23 were reduced significantly in the treatment group when compared with the control group, while the levels of FoxP3 and TGF-β were increased in the treatment group when compared with the control group (P < 0.05). A. membranaceus increased the percentage of Treg cells and reduced the percentage of Th17 cells. A. membranaceus is potential natural product for improving the therapeutic efficacy of combination therapy of budesonide and terbutaline for the children with asthma remission by modulating the balance of Treg/Th17 cells.
Animals
;
Asthma
;
drug therapy
;
immunology
;
Astragalus propinquus
;
chemistry
;
Budesonide
;
administration & dosage
;
Cells, Cultured
;
Child
;
Child, Preschool
;
Cytokines
;
metabolism
;
Drugs, Chinese Herbal
;
administration & dosage
;
pharmacology
;
Female
;
Humans
;
Immunologic Factors
;
administration & dosage
;
pharmacology
;
Leukocytes, Mononuclear
;
drug effects
;
metabolism
;
Lung
;
drug effects
;
physiology
;
Male
;
Swine
;
T-Lymphocytes, Regulatory
;
cytology
;
drug effects
;
Terbutaline
;
administration & dosage
;
Th17 Cells
;
cytology
;
drug effects
;
Treatment Outcome
3.A corn straw-based diet increases release of inflammatory cytokines in peripheral blood mononuclear cells of dairy cows.
Yan-Yi CHE ; Xiao-Jing XIA ; Bo-Ping HE ; Yuan-Yuan GAO ; Wen-Bo REN ; Hong-Tao LIU ; Jian-Fang LIU ; Ting-Hao HUANG ; Wen-Yu HAN ; Lian-Cheng LEI
Journal of Zhejiang University. Science. B 2018;19(10):796-806
Recent studies have shown that diet can affect the body's immunity. Roughage of dairy cows consists of a variety of plant materials which make different contributions to health. This study investigated the effect of different roughages on the immunity of dairy cows. Serum, peripheral blood mononuclear cells (PBMCs), and milk samples were collected from 20 multiparous mid-lactation cows fed mixed forage (MF)- or corn straw (CS)-based diets. Expression profile analysis was used to detect the differentially expressed genes (DEGs) from PBMCs. The results showed that milk protein in the MF group increased to 3.22 g/100 ml, while that of the CS group milk was 2.96 g/100 ml; by RNA sequencing, it was found that 1615 genes were differentially expressed between the CS group and the MF group among the 24 027 analyzed probes. Gene ontology (GO) and pathway analysis of DEGs suggested that these genes (especially genes coding cytokines, chemokine and its receptors) are involved in the immune response. Results were confirmed at the protein level via detecting the levels of interleukin-2 (IL-2), IL-6, IL-10, IL-12, leptin (LEP), interferon-γ (IFN-γ), transforming growth factor-β1 (TGF-β1), and tumor necrosis factor-α (TNF-α) in peripheral blood by enzyme-linked immunosorbent assay (ELISA) and radioimmunoassay analysis. Our data supported the conclusions that the protein content in milk of the MF group was higher than that of the CS group, the CS-based diets induced more release of cytokines than the MF-based diets in dairy cows' PBMCs, and milk protein content may be affected by cytokines.
Animals
;
Cattle/immunology*
;
Cytokines/physiology*
;
Diet
;
Female
;
Gene Ontology
;
Leukocytes, Mononuclear/immunology*
;
Milk/chemistry*
;
Transforming Growth Factor beta/physiology*
;
Zea mays
4.Expression profiles of PI3K, NF-κB, and STAT1 in peripheral blood mononuclear cells in children with bronchial asthma.
Hui-Ling SHI ; Jie-Bo LIU ; Ai-Pin LU
Chinese Journal of Contemporary Pediatrics 2016;18(7):614-617
OBJECTIVETo study the expression profiles of PI3K, NF-κB, and STAT1 in peripheral blood mononuclear cells (PBMCs) in children with bronchial asthma, as well as their roles in the pathogenesis of asthma.
METHODSThirty children with acute exacerbation of bronchial asthma were enrolled as the asthma group, and 20 healthy children were enrolled as the control group. RT-PCR and Western blot were used to measure the mRNA and protein expression levels of PI3K, NF-κB, and STAT1 in PBMCs. A spirometer was used to compare the pulmonary function between the two groups. The correlations between the mRNA expression of PI3K, NF-κB, and STAT1 and pulmonary function in children with bronchial asthma were analyzed.
RESULTSThe asthma group had significantly higher mRNA and protein expression levels of PI3K, NF-κB, and STAT1 than the control group (P<0.05). Compared with the control group, the asthma group showed significant reductions in pulmonary function indices such as FEV1%, FEV1/FVC, and PEF% (P<0.05). In children with bronchial asthma, the mRNA expression levels of PI3K, NF-κB, and STAT1 were negatively correlated with FEV1%, FEV1/FVC, and PEF% (P<0.05).
CONCLUSIONSThe expression levels of PI3K, NF-κB, and STAT1 increase in children with asthma, and are negatively correlated with pulmonary function indices, suggesting that PI3K, NF-κB and STAT1 are involved in the development and progression of bronchial asthma in children.
Asthma ; blood ; etiology ; physiopathology ; Child ; Child, Preschool ; Female ; Forced Expiratory Volume ; Humans ; Leukocytes, Mononuclear ; chemistry ; Male ; NF-kappa B ; blood ; genetics ; physiology ; Phosphatidylinositol 3-Kinases ; blood ; genetics ; physiology ; RNA, Messenger ; analysis ; STAT1 Transcription Factor ; blood ; genetics ; physiology
5.Mangiferin protects rats against chronic bronchitis via regulating NF-kappaB (P65) and IkappaBalpha expression in mononuclear cells.
Zhi-Quan WEI ; Li YAN ; Jia-Gang DENG ; Jing DENG
Acta Pharmaceutica Sinica 2014;49(5):596-601
This study is to investigate the protective effect of mangiferin on NF-kappaB (P65) and IkappaBalpha expression in peripheral blood mononuclear cell (PBMC) in rats with cigarette smoke induced chronic bronchitis. The rat model with chronic bronchitis was established by cigarette smoke. Real-time fluorescence RT-PCR was executed for evaluating the NF-kappaB (P65) and IKkappaBalpha gene expression in mononuclear cell, and flow cytometry for their protein expression. The serum hs-CRP (high-sensitivity C-reactive proteins) and TNF-alpha (tumor necrosis factor-alpha) were detected by enzyme-linked immunosorbent assay. The histopathological score was obtained from lung tissue HE staining slides of lung tissue. The results showed that mangiferin could markedly suppress the NF-kappaB (P65) mRNA and protein expression in mononuclear cell, while promote the IkappaBalpha mRNA and protein expression. Furthermore, mangiferin could lower serum hs-CRP and TNF-alpha level, and reduce the chronic inflammatory damage of bronchiole. These results suggested that mangiferin could notably ameliorate chronic bronchiole inflammation induced by cigarette smoke, and this protective effect might be linked to the regulation of NF-kappaB (P65) and IkappaBalpha expression in mononuclear cell.
Animals
;
Bronchi
;
pathology
;
Bronchitis, Chronic
;
blood
;
etiology
;
metabolism
;
pathology
;
C-Reactive Protein
;
metabolism
;
I-kappa B Kinase
;
genetics
;
metabolism
;
Leukocytes, Mononuclear
;
metabolism
;
pathology
;
Male
;
Mangifera
;
chemistry
;
Plants, Medicinal
;
chemistry
;
RNA, Messenger
;
metabolism
;
Random Allocation
;
Rats
;
Rats, Sprague-Dawley
;
Tobacco Smoke Pollution
;
Transcription Factor RelA
;
genetics
;
metabolism
;
Tumor Necrosis Factor-alpha
;
blood
;
Xanthones
;
isolation & purification
;
pharmacology
6.Research advances on DNA extraction methods from peripheral blood mononuclear cells.
Journal of Experimental Hematology 2014;22(5):1495-1498
DNA extraction is a basic technology of molecular biology. The purity and the integrality of DNA structure are necessary for different experiments of gene engineering. As commonly used materials in the clinical detection, the fast, efficient isolation and extraction of genomic DNA from peripheral blood mononuclear cells is very important for the inspection and analysis of clinical blood. At present, there are many methods for extracting DNA, such as phenol-chloroform method, salting out method, centrifugal adsorption column chromatography method (artificial methods), magnetic beads (semi-automatic method) and DNA extraction kit. In this article, a brief review of the principle for existing DNA blood extraction method, the specific steps and the assessment of the specific methods briefly are summarized.
DNA
;
isolation & purification
;
Genomics
;
Humans
;
Immunomagnetic Separation
;
Leukocytes, Mononuclear
;
chemistry
;
Molecular Biology
;
methods
;
Phenol
7.Proteomic analysis of peripheral blood mononuclear cells to identify potential markers of fibrosis in chronic hepatitis B.
Jiao-Li ZHANG ; Yong-Fu LIU ; Xiao-Fang JIA ; Wei LU ; Lin YIN ; Xiao-Qian LIU ; Jian-Xin LYU ; Zhan-Qing ZHANG ; Bao-Chi LIU ; Li-Jun ZHANG
Chinese Journal of Hepatology 2014;22(11):812-816
OBJECTIVETo identify non-invasive biomarkers for diagnosis and/or prognosis of liver fibrosis in chronic hepatitis B (CHB).
METHODSPeripheral blood samples were obtained from 48 patients with CHB, including 24 with mild fibrosis (stage 1, S1) and 24 with severe fibrosis (stage 4, S4), and subjected to Ficoll density gradient centrifugation in order to obtain enriched samples of peripheral blood mononuclear cells (PBMCs).The PBMC proteomes of the two groups were assessed by first separating the total proteins by two-dimensional gel electrophoresis (2DE) and then identifying the differentially expressed proteins by liquid chromatography combined with tandem mass spectrometry (LCMS/MS).
RESULTSThe enriched PBMC samples from the S1 group and the S4 group had similar amounts of platelets [(19.268+/- 6.413) * 109/L and(19.480+/- 6.538) * 109/L, respectively); however, for both, the platelet amounts were 5 to 15-fold lower than that of the normal reference (100-300 *109/L). There was no significant difference found between the platelet amounts in the S1 patients and healthy controls (P=0.930). Twelve differentially expressed proteins were identified through 2DE-LC-MS/MS, including proteins such as moesin and NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 that are involved in various biological processes like cell movement, cell adhesion, kinase signaling and transcription.
CONCLUSIONs The 12 proteins with differential expression in S1 and S4 patients with CHB and liver fibrosis may represent markers related to development and/or progression of liver fibrosis.
Biomarkers ; Disease Progression ; Electrophoresis, Gel, Two-Dimensional ; Hepatitis B, Chronic ; complications ; Humans ; Leukocytes, Mononuclear ; chemistry ; metabolism ; Liver Cirrhosis ; etiology ; metabolism ; pathology ; Mass Spectrometry ; Prognosis ; Proteome ; Proteomics ; Tandem Mass Spectrometry
8.Influence of sinomenine on protein profiles of peripheral blood mononuclear cells from ankylosing spondylitis patients: a pharmacoproteomics study.
Zhi-xiang HUANG ; Jin-hui TAN ; Tian-wang LI ; Wei-ming DENG ; Ke-wei QIU ; Ze-tao LIAO ; Zhao-qiu ZENG
Chinese Medical Journal 2013;126(19):3645-3650
BACKGROUNDAnkylosing spondylitis (AS) is a common inflammatory rheumatic disease which lacks satisfactory treatment so far. Sinomenine (SIN) is an alkaloid and has recently been utilized in treating multiple rheumatic diseases including AS in China, but its exact mechanism remains to be explored. This study investigated the alteration of proteome in peripheral blood mononuclear cells (PBMCs) from AS patients.
METHODSThirty AS patients were enrolled in this study. PBMCs from each AS patient were cultured in medium with or without SIN respectively. Then PBMCs proteins from both groups were separated by two-dimensional electrophoresis (2-DE) and analyzed by mass spectrometry (MS). Two differentially expressed proteins were then chosen to be verified using Western blotting.
RESULTSSeven proteins, including a-synuclein (SNCA), calmodulin (CALM), acidic leucine-rich nuclear phosphoprotein 32 family member A (ANP32A), chloride intracellular channel protein 1 (CLIC1), guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1), gelsolin (GSN) and histone H2B type 1-M (HISTH2BM) were over-expressed, while coronin- 1A (CORO1A) was under-expressed in the SIN-treated PBMCs. Further bioinformatics search indicated that the changes of SNCA, ANP32A and CLIC1 pertained to apoptosis, while changes of GSN and CORO1A were associated with both apoptosis and inhibition of immunological function. Subsequently GSN and CORO1A were selected to validate by Western blotting and the results were consistent with those of 2-DE.
CONCLUSIONThere were 8 differentially expressed proteins in the SIN-treated PBMCs, which might shed some light on the mechanism of SIN in the treatment of AS.
Adolescent ; Adult ; Blood Proteins ; analysis ; Blotting, Western ; Cells, Cultured ; Electrophoresis, Gel, Two-Dimensional ; Female ; Humans ; Leukocytes, Mononuclear ; chemistry ; Male ; Middle Aged ; Morphinans ; pharmacology ; Proteomics ; methods ; Reproducibility of Results ; Spondylitis, Ankylosing ; blood
9.Immunomodulatory effects of human amniotic membrane-derived mesenchymal stem cells.
Jung Won KANG ; Hye Cheong KOO ; Sun Young HWANG ; Sung Keun KANG ; Jeong Chan RA ; Moon Han LEE ; Yong Ho PARK
Journal of Veterinary Science 2012;13(1):23-31
Human amniotic membrane-derived mesenchymal stem cells (hAM-MSCs) are capable of differentiating into several lineages and possess immunomodulatory properties. In this study, we investigated the soluble factor-mediated immunomodulatory effects of hAM-MSCs. Mitogen-induced peripheral blood mononuclear cell (PBMC) proliferation was suppressed by hAM-MSCs in a dose-dependent manner as well as hAM-MSC culture supernatant. Moreover, interferon-gamma and interleukin (IL)-17 production significantly decreased from PBMC, whereas IL-10 from PBMCs and transforming growth factor beta (TGF-beta) production from hAM-MSCs significantly increased in co-cultures of hAM-MSCs and PBMCs. Production of several MSC factors, including hepatocyte growth factor (HGF), TGF-beta, prostaglandin E2 (PGE2), and indoleamine 2, 3 dioxygenase (IDO), increased significantly in hAM-MSCs co-cultured with PBMCs. These results indicate that the immunomodulatory effects of hAM-MSCs may be associated with soluble factors (TGF-beta, HGF, PGE2, and IDO), suggesting that hAM-MSCs may have potential clinical use in regenerative medicine.
Amnion/cytology/*immunology
;
Cell Differentiation/immunology
;
Coculture Techniques
;
Dinoprostone/genetics/immunology
;
Female
;
Hepatocyte Growth Factor/genetics/immunology
;
Humans
;
Immunologic Factors/*immunology
;
Immunophenotyping
;
Indoleamine-Pyrrole 2,3,-Dioxygenase/genetics/immunology
;
Interferon-gamma/immunology
;
Interleukin-10/analysis/immunology
;
Interleukin-17/analysis/immunology
;
Leukocytes, Mononuclear/cytology/immunology
;
Mesenchymal Stem Cells/cytology/*immunology
;
Pregnancy
;
RNA, Messenger/chemistry/genetics
;
Regenerative Medicine/methods
;
Reverse Transcriptase Polymerase Chain Reaction
;
Transforming Growth Factor beta/genetics/immunology
10.In vitro anti-tumor effect of methotrexate modified by peptide.
Ya-Mei ZHOU ; Xue-Ping WU ; Li ZENG ; Ya-Rong ZHANG ; Li-Jun PAN ; Chi WANG
Acta Pharmaceutica Sinica 2012;47(4):452-458
This study is to investigate the anti-tumor effect in vitro of methotrexate modified by LH-RH peptide (LH-RH-MTX). LH-RH receptors highly expressing MCF-7 human breast carcinoma cell line and lowly expressing K562 human erythroleukemia cell line were served as the tested cells. The cell proliferation inhibition rates of LH-RH-MTX were detected by MTT colorimetric assay. The effects of LH-RH-MTX on the cell cycle and apoptosis rates were detected by flow cytometry. The inhibition rate of LH-RH-MTX on MCF-7 cells was much higher than that on K562 cells, and the inhibition rate of LH-RH-MTX on MCF-7 cells was much higher than that of free MTX at the same concentration. The inhibition rate of LH-RH-MTX on rat bone marrow mononuclear cells was less than that of free MTX. The number of MCF-7 cells in S phase increased after administration of LH-RH-MTX. The apoptosis rate of LH-RH-MTX group significantly increased compared with that of the control group and MTX group. The relative expression of LHRHR mRNA of LH-RH-MTX group markedly decreased compared with that of the control group and MTX group. LH-RH-MTX is realizable to reduce drug side effects, increase the therapeutic index and achieve tumor-targeted therapy.
Animals
;
Antimetabolites, Antineoplastic
;
chemical synthesis
;
pharmacology
;
Apoptosis
;
drug effects
;
Bone Marrow Cells
;
cytology
;
Cell Cycle
;
drug effects
;
Cell Proliferation
;
drug effects
;
Cells, Cultured
;
Drug Delivery Systems
;
Gonadotropin-Releasing Hormone
;
chemistry
;
pharmacology
;
Humans
;
K562 Cells
;
Leukocytes, Mononuclear
;
MCF-7 Cells
;
Methotrexate
;
chemical synthesis
;
pharmacology
;
RNA, Messenger
;
metabolism
;
Rats
;
Receptors, LHRH
;
biosynthesis
;
genetics

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