1.Cell metabolomics study of ginkgo flavone aglycone combined with doxorubicin against liver cancer in synergy.
Yuan LU ; Yan-Li WANG ; Zhong-Jun SONG ; Xiao-Qing ZHU ; Chun-Hua LIU ; Ji-Yu CHEN ; Yong-Jun LI ; Yan HE
China Journal of Chinese Materia Medica 2022;47(18):5040-5051
Ultra-high-performance liquid chromatography-Q exactive orbitrap tandem mass spectrometry(UHPLC-QEOrbitrap-MS/MS) was used to explore the inhibitory effect and mechanism of ginkgo flavone aglycone(GA) combined with doxorubicin(DOX) on H22 cells. The effects of different concentrations of GA and DOX on the viability of H22 cells were investigated, and combination index(CI) was used to evaluate the effects. In the experiments, control(CON) group, DOX group, GA group, and combined GA and DOX(GDOX) group were constructed. Then the metabolomics strategy was employed to explore the metabolic markers that were significantly changed after combination therapy on the basis of single medication treatment, and by analyzing their biological significance, the effect and mechanism of the anti-tumor effect of GA combined with DOX were explained. The results revealed that when 30 μg·mL~(-1) GA and 0.5 μmol·L~(-1) DOX was determined as the co-administration concentration, the CI value was 0.808, indicating that the combination of GA and DOX had a synergistic anti-tumor effect. Metabolomics analysis identified 23 metabolic markers, including L-arginine, L-tyrosine and L-valine, mostly amino acids. Compared with the CON group, 22 and 17 metabolic markers were significantly down-regulated after DOX treatment and GA treatment, respectively. Compared with the DOX and GA groups, the treatment of GA combined with DOX further down-regulated the levels of these metabolic markers in liver cancer, which might contribute to the synergistic effect of the two. Five key metabolic pathways were found in pathway enrichment analysis, including glutathione metabolism, phenylalanine metabolism, arginine and proline metabolism, β-alanine metabolism, and valine, leucine and isoleucine degradation. These findings demonstrated that the combination of GA and DOX remarkably inhibited the viability of H22 cells and exerted a synergistic anti-tumor effect. The mechanism might be related to the influence of the energy supply of tumor cells by interfering with the metabolism of various amino acids.
Arginine/therapeutic use*
;
Doxorubicin/therapeutic use*
;
Flavones/therapeutic use*
;
Ginkgo biloba/chemistry*
;
Glutathione
;
Humans
;
Isoleucine/therapeutic use*
;
Leucine/therapeutic use*
;
Liver Neoplasms/drug therapy*
;
Metabolomics/methods*
;
Phenylalanine/therapeutic use*
;
Proline
;
Tandem Mass Spectrometry/methods*
;
Tyrosine/therapeutic use*
;
Valine/therapeutic use*
;
beta-Alanine/therapeutic use*
2.Sensors for the mTORC1 pathway regulated by amino acids.
Journal of Zhejiang University. Science. B 2019;20(9):699-712
The mechanistic target of rapamycin complex 1 (mTORC1) controls cell growth and metabolism in response to various environmental inputs, especially amino acids. In fact, the activity of mTORC1 is highly sensitive to changes in amino acid levels. Over past decades, a variety of proteins have been identified as participating in the mTORC1 pathway regulated by amino acids. Classically, the Rag guanosine triphosphatases (GTPases), which reside on the lysosome, transmit amino acid availability to the mTORC1 pathway and recruit mTORC1 to the lysosome upon amino acid sufficiency. Recently, several sensors of leucine, arginine, and S-adenosylmethionine for the amino acid-stimulated mTORC1 pathway have been coming to light. Characterization of these sensors is requisite for understanding how cells adjust amino acid sensing pathways to their different needs. In this review, we summarize recent advances in amino acid sensing mechanisms that regulate mTORC1 activity and highlight these identified sensors that accurately transmit specific amino acid signals to the mTORC1 pathway.
Amino Acids/chemistry*
;
Animals
;
Arginine/chemistry*
;
Cell Membrane/metabolism*
;
GTP Phosphohydrolases/metabolism*
;
Gene Expression Regulation
;
Golgi Apparatus/metabolism*
;
Humans
;
Leucine/chemistry*
;
Lysosomes/metabolism*
;
Mechanistic Target of Rapamycin Complex 1/metabolism*
;
Methionine/chemistry*
;
S-Adenosylmethionine/chemistry*
;
Signal Transduction
;
TOR Serine-Threonine Kinases/metabolism*
3.Deacetylation of TFEB promotes fibrillar Aβ degradation by upregulating lysosomal biogenesis in microglia.
Jintao BAO ; Liangjun ZHENG ; Qi ZHANG ; Xinya LI ; Xuefei ZHANG ; Zeyang LI ; Xue BAI ; Zhong ZHANG ; Wei HUO ; Xuyang ZHAO ; Shujiang SHANG ; Qingsong WANG ; Chen ZHANG ; Jianguo JI
Protein & Cell 2016;7(6):417-433
Microglia play a pivotal role in clearance of Aβ by degrading them in lysosomes, countering amyloid plaque pathogenesis in Alzheimer's disease (AD). Recent evidence suggests that lysosomal dysfunction leads to insufficient elimination of toxic protein aggregates. We tested whether enhancing lysosomal function with transcription factor EB (TFEB), an essential regulator modulating lysosomal pathways, would promote Aβ clearance in microglia. Here we show that microglial expression of TFEB facilitates fibrillar Aβ (fAβ) degradation and reduces deposited amyloid plaques, which are further enhanced by deacetylation of TFEB. Using mass spectrometry analysis, we firstly confirmed acetylation as a previously unreported modification of TFEB and found that SIRT1 directly interacted with and deacetylated TFEB at lysine residue 116. Subsequently, SIRT1 overexpression enhanced lysosomal function and fAβ degradation by upregulating transcriptional levels of TFEB downstream targets, which could be inhibited when TFEB was knocked down. Furthermore, overexpression of deacetylated TFEB at K116R mutant in microglia accelerated intracellular fAβ degradation by stimulating lysosomal biogenesis and greatly reduced the deposited amyloid plaques in the brain slices of APP/PS1 transgenic mice. Our findings reveal that deacetylation of TFEB could regulate lysosomal biogenesis and fAβ degradation, making microglial activation of TFEB a possible strategy for attenuating amyloid plaque deposition in AD.
Alzheimer Disease
;
metabolism
;
pathology
;
Amyloid beta-Peptides
;
metabolism
;
Amyloid beta-Protein Precursor
;
genetics
;
metabolism
;
Animals
;
Basic Helix-Loop-Helix Leucine Zipper Transcription Factors
;
chemistry
;
genetics
;
metabolism
;
Brain
;
metabolism
;
Cells, Cultured
;
Chloride Channels
;
genetics
;
metabolism
;
Disease Models, Animal
;
HEK293 Cells
;
Humans
;
Lysosomes
;
genetics
;
metabolism
;
Mice
;
Mice, Transgenic
;
Microglia
;
cytology
;
metabolism
;
Mutagenesis, Site-Directed
;
Peptides
;
analysis
;
chemistry
;
Protein Binding
;
RNA Interference
;
Sirtuin 1
;
antagonists & inhibitors
;
genetics
;
metabolism
4.Clinicopathological features of Xp11.2 translocation renal cell carcinoma.
Bumjin LIM ; Dalsan YOU ; In Gab JEONG ; Taekmin KWON ; Sungwoo HONG ; Cheryn SONG ; Yong Mee CHO ; Bumsik HONG ; Jun Hyuk HONG ; Hanjong AHN ; Choung Soo KIM
Korean Journal of Urology 2015;56(3):212-217
PURPOSE: Xp11.2 translocation renal cell carcinoma (RCC) is characterized by various translocations of the TFE3 transcription factor gene. These rare cancers occur predominantly in children and young adults. Here, we review the clinicopathological features of Xp11.2 translocation RCC. MATERIALS AND METHODS: We identified 21 patients with Xp11.2 translocation RCC. We retrospectively analyzed patient characteristics, clinical manifestations, and specific pathological features to assess definitive diagnosis, surgical and systemic treatments, and clinical outcomes. RESULTS: The mean age at diagnosis was 43.4+/-20.0 years (range, 8-80 years; 8 males and 13 females). Eleven patients were incidentally diagnosed, nine patients presented with local symptoms, and one patient presented with systemic symptoms. The mean tumor size was 6.2+/-3.8 cm (range, 1.9-14 cm). At the time of diagnosis, 11, 1, and 5 patients showed stage I, II, and III, respectively. Four patients showed distant metastasis. At analysis, 15 patients were disease-free after a median follow-up period of 30.0 months. Four patients received target therapy but not effectively. CONCLUSIONS: Xp11 translocation RCC tends to develop in young patients with lymph node metastasis. Targeted therapy did not effectively treat our patients. Surgery is the only effective therapy for Xp11 translocation RCC, and further studies are needed to assess systemic therapy and long-term prognosis.
Adolescent
;
Adult
;
Aged
;
Aged, 80 and over
;
Basic Helix-Loop-Helix Leucine Zipper Transcription Factors/*genetics
;
Biomarkers
;
Carcinoma, Renal Cell/diagnosis/*genetics
;
Child
;
Chromosomes, Human, X/*chemistry
;
Female
;
Humans
;
Kidney Neoplasms/diagnosis/*genetics
;
Lymphatic Metastasis
;
Male
;
Middle Aged
;
Prognosis
;
Retrospective Studies
;
Translocation, Genetic
;
Young Adult
5.ULK1 and JNK are involved in mitophagy incurred by LRRK2 G2019S expression.
Yuangang ZHU ; Chunyan WANG ; Mei YU ; Jie CUI ; Liang LIU ; Zhiheng XU
Protein & Cell 2013;4(9):711-721
Mutations in LR RK2 (Leucine rich repeat kinase 2) are a major cause of Parkinson's disease (PD). We and others reported recently that expression of the pathogenic gainof-function mutant form of LRRK2, LRRK2 G2019S, induces mitochondrial fission in neurons through DLP1. Here we provide evidence that expression of LRRK2 G2019S stimulates mitochondria loss or mitophagy. We have characterized several LRRK2 interacting proteins and found that LRRK2 interacts with ULK1 which plays an essential role in autophagy. Knockdown of either ULK1 or DLP1 expression with shRNAs suppresses LRRK2 G2019S expression-induced mitochondrial clearance, suggesting that LRRK2 G2019S expression induces mitochondrial fission through DLP1 followed by mitophagy via an ULK1 dependent pathway. In addition to ULK1, we found that LRRK2 interacts with the endogenous MKK4/7, JIP3 and coordinates with them in the activation of JNK signaling. Interestingly, LRRK2 G2019S-induced loss of mitochondria can also be suppressed by 3 different JNK inhibitors, implying the involvement of the JNK pathway in the pathogenic mechanism of mutated LRRK2. Thus our findings may provide an insight into the complicated pathogenesis of PD as well as some clues to the development of novel therapeutic strategies.
Amino Acid Substitution
;
Autophagosomes
;
metabolism
;
pathology
;
Autophagy-Related Protein-1 Homolog
;
chemistry
;
genetics
;
metabolism
;
GTP Phosphohydrolases
;
antagonists & inhibitors
;
genetics
;
metabolism
;
Gene Knockdown Techniques
;
HeLa Cells
;
Humans
;
Intracellular Signaling Peptides and Proteins
;
chemistry
;
genetics
;
metabolism
;
Leucine-Rich Repeat Serine-Threonine Protein Kinase-2
;
chemistry
;
genetics
;
metabolism
;
MAP Kinase Signaling System
;
Microtubule-Associated Proteins
;
antagonists & inhibitors
;
genetics
;
metabolism
;
Mitochondrial Degradation
;
genetics
;
physiology
;
Mitochondrial Proteins
;
antagonists & inhibitors
;
genetics
;
metabolism
;
Mutant Proteins
;
chemistry
;
genetics
;
metabolism
;
Mutation
;
Parkinson Disease
;
genetics
;
metabolism
;
pathology
;
Protein Interaction Domains and Motifs
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Recombinant Proteins
;
chemistry
;
genetics
;
metabolism
6.Leucine zippers improves protein splicing-mediated coagulation factor VIII gene delivery by dual-vector system.
Fu-Xiang ZHU ; Shu-De YANG ; Ze-Long LIU ; Jing MIAO ; Hui-Ge QU ; Xiao-Yan CHI
Acta Pharmaceutica Sinica 2012;47(1):39-44
In our recent study by exploring an intein-based dual-vector to deliver a B-domain-deleted FVIII (BDD-FVIII) gene, it showed that covalently ligated intact BDD-FVIII molecules with a specific coagulant activity could be produced from expressed heavy and light chains by protein trans-splicing. Here, we assessed the hypothesis that the efficiency of trans-splicing may be increased by adding to the intein sequences a pair of leucine zippers that are known to bring about specific and strong protein binding. The intein-fused heavy and light chain genes were co-transferred into cultured COS-7 cells using a dual-vector system. After transient expression, the intracellular BDD-FVIII splicing was observed and the spliced BDD-FVIII and bioactivity secreted to culture media were quantitatively analyzed. An enhanced splicing of BDD-FVIII with decreased protein precursors from gene co-transfected cells was observed by Western blotting. The amount of spliced BDD-FVIII and bioactivity secreted to the culture media were 106 +/- 12 ng x mL(-1) and 0.89 +/- 0.11 U x mL(-1) analyzed by ELISA and Coatest method respectively, which was greater than leucine zipper free intein-fused heavy and light chain genes co-transfected cells (72 +/- 10 ng x mL(-1) and 0.62 +/- 0.07 U x mL(-1)). The activity of cellular mechanism-independent protein splicing was also improved, as showed by the increasing of spliced BDD-FVIII and bioactivity in culture media from combined cells separately transfected with heavy and light chain genes which was 36 +/- 11 ng x mL(-1) and 0.28 +/- 0.09 U x mL(-1). It demonstrated that the leucine zippers could be used to increase the efficiency of protein trans-splicing to improve the efficacy of a dual-vector mediated BDD-FVIII gene delivery by strengthening the interaction between the two intein-pieces fused to heavy and light chains. It provided evidence for further study in animal model using a dual-adeno-associated virus vector to deliver FVIII gene in vivo.
Animals
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COS Cells
;
Cercopithecus aethiops
;
Factor VIII
;
chemistry
;
genetics
;
metabolism
;
Genetic Vectors
;
Inteins
;
Leucine Zippers
;
Peptide Fragments
;
chemistry
;
genetics
;
metabolism
;
Protein Splicing
;
Trans-Splicing
;
Transfection
7.A new water-soluble lubricant of tablets-L-leucine combined with PEG6000.
Wei LIU ; Kai HUANG ; Xiaoyong RAO ; Xiaoyan LIU ; Shasha SUN ; Xiaojian LUO
China Journal of Chinese Materia Medica 2011;36(15):2061-2065
OBJECTIVETo prepare an effective and water-soluble lubricant.
METHODCo-sprayed lubricant (L-leucine and polyethylene glycol 6000 co-sprayed according to a certain proportion) and mixed lubricant (the physical mixture of spayed L-leucine and crushed polyethylene glycol 6000) were prepared and polyethylene glycol 6000, L-leucine, magnesium stearate, sodium stearyl fumarate and sodium chloride are crushed and sieved, respectively. Residual force, appearance of solution and disintegration time were considered as response variables of the lubrication effect to evaluate different lubricants. The changes of the co-sprayed lubricant were studied by differential scanning calorimetry, fourier infrared, electronic scanning microscope and X-ray diffraction.
RESULTThe efficacy of co-sprayed lubricant is better than other lubricants. Efficacy is improved by external form change without inner components and crystal changes.
CONCLUSIONCo-sprayed lubricant is a good water soluble tablet lubricant which has good efficacy.
Chemistry, Pharmaceutical ; Leucine ; chemistry ; Lubricants ; chemistry ; Polyethylene Glycols ; chemistry ; Solubility ; Tablets ; Water ; X-Ray Diffraction
8.Affection of acupotomy lysis on leu-enkephalin (L-ENK) content in different parts of centrum of rats with knee osteoarthritis.
Chang-qing GUO ; Bo JI ; You-nan CHEN ; Ding-wen ZHONG ; Yan JIN ; Qing-guo LIU ; Meng-wei GUO ; Yi ZHANG ; Nai-gang LIU ; Zhan-lu CHEN
China Journal of Orthopaedics and Traumatology 2011;24(8):656-658
OBJECTIVETo study the analgesia mechanism of needle-knife lysis in spinal cord and other parts of central nervous system by comparing the changes of Leu-Enkephalin (L-ENK) content in different parts of centrium of rats undergone needle-knife lysis and electro-acupuncture respectively.
METHODSSixty healthy SD rats were randomly devided into normal control group, model group, needle-knife lysis (NKL) group and electro-acupuncture (EA) group. 4% papain solution mixed with 0.3 mol/L cysteine solutin in the ratio of 1:1, paused for 0.5 h,injected the mixture, 20 microl each time,into the left knee joint cavities of rats in model, NKL, EA groups at the 1st, 4th, 7th day. After 4 weeks in NKL group and EA group were treated with needle-knife lysis and electro-acupuncture, respectively. Three weeks after treatment, samples of spinal cord of the swollen part of rat waists and rat brains were taken from and the content of L-ENK of medulla oblongata, midbrain, pituitary gland, and hippocampus were measured.
RESULTSL-ENK content of model group increased higher than that of normal control group in spinal cord, hippocampus and midbrain (P < 0.01); there were no significant difference between normal control group and modle group on L-ENK in medulla oblongata and thalamus (P > 0.05). After intervening of NKL or EA, L-ENK content of NKL group increased higher in hippocampus than that of model group and EC group (P < 0.05); but L-ENK content of NKL group in midbrain was lower than that of model group (P < 0.05).
CONCLUSIONNeedle-knife lysis has characteristic of regulation for the L-ENK content in different parts of central nervous system of rats with knee osteoarthritis, and analgesic effect of needle-knife was possibly related with regulation of center L-ENK.
Acupuncture Therapy ; methods ; Animals ; Central Nervous System ; chemistry ; Electroacupuncture ; Enkephalin, Leucine ; analysis ; Female ; Male ; Osteoarthritis, Knee ; metabolism ; therapy ; Rats ; Rats, Sprague-Dawley
9.Advance of the study on LRRK2 gene in Parkinson's disease.
Chinese Journal of Medical Genetics 2008;25(6):657-659
The leucine-rich repeat kinase2 (LRRK2) has been identified to be the gene causing autosomal dominant inherited Parkinson's disease(PD)8. The clinical features of this type of PD are similar to those of idiopathic PD, but the pathological changes are diverse. The mutation types and frequencies of the LRRK2 distribute unevenly in different populations. LRRK2 is a large complex protein with multiple functions and expresses widely in human body. Sequence alignment shows that LRRK2 might be a multiple function kinase for substrate phosphorylation and might also act as a scaffolding protein. Further study on the physiological function and pathogenic mechanism of LRRK2 will help to find out the possible pathogenesis and new treatment for PD.
Animals
;
Continental Population Groups
;
genetics
;
Humans
;
Leucine-Rich Repeat Serine-Threonine Protein Kinase-2
;
Mutation
;
Parkinson Disease
;
genetics
;
pathology
;
Protein-Serine-Threonine Kinases
;
chemistry
;
genetics
;
metabolism
;
Sequence Alignment
10.Purification and characterization of carbonyl enantioselective reductase from Morganella morganii J-8.
Peng-Hu ZHANG ; Liang ZHANG ; Yan LU ; Gui-Yang SHI
Chinese Journal of Biotechnology 2007;23(2):268-272
The purification and the characteristics of an enzyme from Morganella morganii J-8, which could produce d-pseudoephedrine from 1-phenyl-2-methylamine-acetone, were performed in this study. In this research, first, cells were disrupted by ultrasonic treatment at 4 degrees C. The carbonyl enantioselective reductase was purified with a combination of ammonium precipitation, Phenyl Superose hydrophobic chromatography, DEAE anion exchange, and native polyacrylamide gel electrophoresis. The molecular mass of the purified enzyme subunit was estimated to be 42.5kD on sodium dodecyl sulfate-polyacrylamide electrophoresis (SDS-PAGE). The native molecular mass of the enzyme that was analyzed by high-performance liquid chromatography was found out to be 84.1 kD, which indicated that the enzyme was a dimmer. The purified enzyme was analyzed by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry, and the result showed that the purified enzyme had high homology with leucine dehydrogenase.
Bacterial Proteins
;
chemistry
;
isolation & purification
;
metabolism
;
Biocatalysis
;
drug effects
;
Chromatography, High Pressure Liquid
;
Electrophoresis, Polyacrylamide Gel
;
Enzyme Stability
;
drug effects
;
Hydrogen-Ion Concentration
;
Kinetics
;
Leucine Dehydrogenase
;
metabolism
;
Metals, Heavy
;
pharmacology
;
Molecular Weight
;
Morganella morganii
;
enzymology
;
metabolism
;
Oxidoreductases
;
chemistry
;
isolation & purification
;
metabolism
;
Pseudoephedrine
;
chemistry
;
metabolism
;
Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
;
Stereoisomerism
;
Temperature

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