2.Performance Evaluation of the Beckman Coulter DxN VERIS Hepatitis B Virus (HBV) Assay in Comparison With the Abbott RealTime HBV Assay.
Joonhong PARK ; Hanwool CHO ; Seung Jun CHOI ; Gun Dong LEE ; Sang Hyun SIN ; Ji Hyeong RYU ; Hye Sun PARK ; Hyeyoung LEE ; Yonggoo KIM ; Eun Jee OH
Annals of Laboratory Medicine 2019;39(1):86-90
The detection and quantification of hepatitis B virus (HBV) DNA plays an important role in diagnosing and monitoring HBV infection as well as in assessing the therapeutic response. We compared the analytical performance of a random access, fully automated HBV assay—DxN VERIS Molecular Diagnostics System (Beckman Coulter, Brea, CA, USA)—with that of Abbott RealTime HBV assay (Abbott Laboratories, Des Plaines, IL, USA). The between-day precision of the VERIS assay ranged from 0.92% (mean 4.68 log IU/mL) to 4.15% (mean 2.09 log IU/mL) for pooled sera from HBV patients. HBV DNA levels measured by the VERIS HBV assay correlated with the calculated HBV DNA levels (r²=0.9994; P < 0.0001). The lower limit of quantification was estimated as 8.76 IU/mL (Probit analysis, 95% confidence interval: 7.32–12.00 IU/mL). Passing-Bablok regression analysis showed good concordance between the VERIS and RealTime assays for 187 chronic HBV samples (y=−0.2397+0.9712x; r=0.981), as well as for 20 drug-resistant HBV genotype C positive samples (y=−0.5415+0.9954x; r=0.961). The VERIS assay demonstrated performance similar to the RealTime assay and is suitable for high-throughput HBV DNA monitoring in large hospital laboratories.
DNA
;
Genotype
;
Hepatitis B virus*
;
Hepatitis B*
;
Hepatitis*
;
Humans
;
Laboratories, Hospital
;
Pathology, Molecular
3.Automation and productivity in the clinical laboratory: experience of a tertiary healthcare facility.
Singapore medical journal 2018;59(11):597-601
Clinical laboratories for in vitro diagnostics are facing pressure to preserve cost control while providing better services through new initiatives. Laboratory automation is a partial answer to this problem, having come a long way from the early days of clinical laboratory testing. The journey and implementation of automation in the Singapore General Hospital's Clinical Biochemistry Laboratory has allowed for sustained performance in the light of increasing workload and service commitments amid an evolving healthcare environment. Key to realising predicted outcomes is the optimisation of workflow processes, reduction of errors, and spatial placement of specimen reception and analytical areas. This paper gives an overview of our experience with automation in the clinical laboratory and its subsequent impact on service standards.
Aged
;
Automation, Laboratory
;
Clinical Laboratory Information Systems
;
organization & administration
;
Clinical Laboratory Techniques
;
Efficiency, Organizational
;
statistics & numerical data
;
Hospitals, General
;
Humans
;
Laboratories, Hospital
;
organization & administration
;
Middle Aged
;
Quality of Health Care
;
Singapore
;
Tertiary Healthcare
;
organization & administration
;
User-Computer Interface
;
Workload
4.Survey and Solutions for the Current Status of Quality Control in Small Hospital Laboratories.
Jae Han KIM ; Eun Jin CHOI ; Gyuhyeon HWANG ; Jae Ho LEE ; Mi Soon HAN
Journal of Laboratory Medicine and Quality Assurance 2018;40(2):101-108
BACKGROUND: To prevent medically significant errors, hospital laboratories must perform thorough statistical quality control (QC) procedures. We surveyed the QC status of small laboratories and created new statistical QC software that they can easily use for improving QC. METHODS: A questionnaire on the status of external and internal QC was created and sent to clinics and hospitals with small-scale laboratories. We then created QC software that can be downloaded and installed for free. RESULTS: External quality assessments were performed in 32% of the clinics (22 of 66) and 52% of the hospitals (12 of 23). Seventy-three percent of all institutions (66 of 90) carried out an internal quality assessment based on their own guidelines, mostly using commercialized QC materials. However, only 52% of clinics and 23% of hospitals used their own acceptable range instead of the manufacturer's expected range. In addition, the proportion of manual QC management reached 52% in clinics and 82% in hospitals. The QC software we designed covers all the basic functions of statistical QC and aims to improve the quality of laboratories. CONCLUSIONS: We obtained basic data on the current status of external and internal QC in small-scale laboratories using this survey. Furthermore, we suggested that new QC software may actually help to improve QC of small laboratories.
Laboratories, Hospital*
;
Quality Assurance, Health Care
;
Quality Control*
5.Removing Lipemia in Serum/Plasma Samples: A Multicenter Study.
María José CASTRO-CASTRO ; Beatriz CANDÁS-ESTÉBANEZ ; Margarita ESTEBAN-SALÁN ; Pilar CALMARZA ; Teresa ARROBAS-VELILLA ; Carlos ROMERO-ROMÁN ; Miguel POCOVÍ-MIERAS ; José Angel AGUILAR-DORESTE
Annals of Laboratory Medicine 2018;38(6):518-523
BACKGROUND: Lipemia, a significant source of analytical errors in clinical laboratory settings, should be removed prior to measuring biochemical parameters. We investigated whether lipemia in serum/plasma samples can be removed using a method that is easier and more practicable than ultracentrifugation, the current reference method. METHODS: Seven hospital laboratories in Spain participated in this study. We first compared the effectiveness of ultracentrifugation (108,200×g) and high-speed centrifugation (10,000×g for 15 minutes) in removing lipemia. Second, we compared high-speed centrifugation with two liquid-liquid extraction methods—LipoClear (StatSpin, Norwood, USA), and 1,1,2-trichlorotrifluoroethane (Merck, Darmstadt, Germany). We assessed 14 biochemical parameters: serum/plasma concentrations of sodium ion, potassium ion, chloride ion, glucose, total protein, albumin, creatinine, urea, alkaline phosphatase, gamma-glutamyl transferase, alanine aminotransferase, aspartate-aminotransferase, calcium, and bilirubin. We analyzed whether the differences between lipemia removal methods exceeded the limit for clinically significant interference (LCSI). RESULTS: When ultracentrifugation and high-speed centrifugation were compared, no parameter had a difference that exceeded the LCSI. When high-speed centrifugation was compared with the two liquid-liquid extraction methods, we found differences exceeding the LCSI in protein, calcium, and aspartate aminotransferase in the comparison with 1,1,2-trichlorotrifluoroethane, and in protein, albumin, and calcium in the comparison with LipoClear. Differences in other parameters did not exceed the LCSI. CONCLUSIONS: High-speed centrifugation (10,000×g for 15 minutes) can be used instead of ultracentrifugation to remove lipemia in serum/plasma samples. LipoClear and 1,1,2-trichlorotrifluoroethane are unsuitable as they interfere with the measurement of certain parameters.
Alanine Transaminase
;
Alkaline Phosphatase
;
Aspartate Aminotransferases
;
Bilirubin
;
Calcium
;
Centrifugation
;
Creatinine
;
Glucose
;
Hyperlipidemias*
;
Laboratories, Hospital
;
Liquid-Liquid Extraction
;
Methods
;
Potassium
;
Sodium
;
Spain
;
Transferases
;
Ultracentrifugation
;
Urea
6.Clinical Pharmacogenetic Testing and Application: Laboratory Medicine Clinical Practice Guidelines.
Sollip KIM ; Yeo Min YUN ; Hyo Jin CHAE ; Hyun Jung CHO ; Misuk JI ; In Suk KIM ; Kyung A WEE ; Woochang LEE ; Sang Hoon SONG ; Hye In WOO ; Soo Youn LEE ; Sail CHUN
Annals of Laboratory Medicine 2017;37(2):180-193
Pharmacogenetic testing for clinical applications is steadily increasing. Correct and adequate use of pharmacogenetic tests is important to reduce unnecessary medical costs and adverse patient outcomes. This document contains recommended pharmacogenetic testing guidelines for clinical application, interpretation, and result reporting through a literature review and evidence-based expert opinions for the clinical pharmacogenetic testing covered by public medical insurance in Korea. This document aims to improve the utility of pharmacogenetic testing in routine clinical settings.
Anticoagulants/therapeutic use
;
Antidepressive Agents/therapeutic use
;
Antimetabolites, Antineoplastic/therapeutic use
;
Antitubercular Agents/therapeutic use
;
Arylamine N-Acetyltransferase/genetics
;
Coronary Artery Disease/drug therapy/genetics
;
Cytochrome P-450 CYP2C19/genetics
;
Cytochrome P-450 CYP2C9/genetics
;
Cytochrome P-450 CYP2D6/genetics
;
Depressive Disorder/drug therapy/genetics
;
Genotype
;
Isoniazid/therapeutic use
;
Laboratories, Hospital/standards
;
Methyltransferases/genetics
;
Pharmacogenomic Testing/*methods/standards
;
Platelet Aggregation Inhibitors/therapeutic use
;
Pulmonary Embolism/drug therapy/genetics
;
Ticlopidine/analogs & derivatives/therapeutic use
;
Tuberculosis/drug therapy/genetics
;
Vitamin K Epoxide Reductases/genetics
;
Warfarin/therapeutic use
7.Current Pathological and Laboratory Considerations in the Diagnosis of Disseminated Intravascular Coagulation.
Cheng Hock TOH ; Yasir ALHAMDI ; Simon T ABRAMS
Annals of Laboratory Medicine 2016;36(6):505-512
Systemically sustained thrombin generation in vivo is the hallmark of disseminated intravascular coagulation (DIC). Typically, this is in response to a progressing disease state that is associated with significant cellular injury. The etiology could be infectious or noninfectious, with the main pathophysiological mechanisms involving cross-activation among coagulation, innate immunity, and inflammatory responses. This leads to consumption of both pro- and anticoagulant factors as well as endothelial dysfunction and disrupted homeostasis at the blood vessel wall interface. In addition to the release of tissue plasminogen activator (tPA) and soluble thrombomodulin (sTM) following cellular activation and damage, respectively, there is the release of damage-associated molecular patterns (DAMPs) such as extracellular histones and cell-free DNA. Extracellular histones are increasingly recognized as significantly pathogenic in critical illnesses through direct cell toxicity, the promotion of thrombin generation, and the induction of neutrophil extracellular trap (NET) formation. Clinically, high circulating levels of histones and histone–DNA complexes are associated with multiorgan failure, DIC, and adverse patient outcomes. Their measurements as well as that of other DAMPs and molecular markers of thrombin generation are not yet applicable in the routine diagnostic laboratory. To provide a practical diagnostic tool for acute DIC, a composite scoring system using rapidly available coagulation tests is recommended by the International Society on Thrombosis and Haemostasis. Its usefulness and limitations are discussed alongside the advances and unanswered questions in DIC pathogenesis.
Blood Platelets/cytology/pathology
;
Disseminated Intravascular Coagulation/*diagnosis/pathology
;
Fibrin Fibrinogen Degradation Products/analysis
;
Humans
;
Immunity, Innate
;
Laboratories, Hospital
;
Partial Thromboplastin Time
;
Prothrombin Time
;
Thrombelastography
8.Viral Contamination Source in Clinical Microbiology Laboratory.
Xin Ling WANG ; Juan SONG ; Qin Qin SONG ; Jie YU ; Xiao Nuan LUO ; Gui Zhen WU ; Jun HAN
Biomedical and Environmental Sciences 2016;29(8):609-611
To understand the potential causes of laboratory-acquired infections and to provide possible solutions that would protect laboratory personnel, samples from a viral laboratory were screened to determine the main sources of contamination with six subtypes of Rhinovirus. Rhinovirus contamination was found in the gloves, cuffs of protective wear, inner surface of biological safety cabinet (BSC) windows, and trash handles. Remarkably, high contamination was found on the inner walls of the centrifuge and the inner surface of centrifuge tube casing in the rotor. Spilling infectious medium on the surface of centrifuge tubes was found to contribute to contamination of centrifuge surfaces. Exposure to sodium hypochlorite containing no less than 0.2 g/L available chlorine decontaminated the surface of the centrifuge tubes from Rhinovirus after 2 min.
Equipment Contamination
;
statistics & numerical data
;
Humans
;
Laboratories, Hospital
;
manpower
;
standards
;
statistics & numerical data
;
Occupational Exposure
;
analysis
;
statistics & numerical data
;
Virus Diseases
;
virology
;
Viruses
;
genetics
;
growth & development
;
isolation & purification
9.Can a Point-of-Care Troponin I Assay be as Good as a Central Laboratory Assay? A MIDAS Investigation.
W Frank PEACOCK ; Deborah DIERCKS ; Robert BIRKHAHN ; Adam J SINGER ; Judd E HOLLANDER ; Richard NOWAK ; Basmah SAFDAR ; Chadwick D MILLER ; Mary PEBERDY ; Francis COUNSELMAN ; Abhinav CHANDRA ; Joshua KOSOWSKY ; James NEUENSCHWANDER ; Jon SCHROCK ; Elizabeth LEE-LEWANDROWSKI ; William ARNOLD ; John NAGURNEY
Annals of Laboratory Medicine 2016;36(5):405-412
BACKGROUND: We aimed to compare the diagnostic accuracy of the Alere Triage Cardio3 Tropinin I (TnI) assay (Alere, Inc., USA) and the PathFast cTnI-II (Mitsubishi Chemical Medience Corporation, Japan) against the central laboratory assay Singulex Erenna TnI assay (Singulex, USA). METHODS: Using the Markers in the Diagnosis of Acute Coronary Syndromes (MIDAS) study population, we evaluated the ability of three different assays to identify patients with acute myocardial infarction (AMI). The MIDAS dataset, described elsewhere, is a prospective multicenter dataset of emergency department (ED) patients with suspected acute coronary syndrome (ACS) and a planned objective myocardial perfusion evaluation. Myocardial infarction (MI) was diagnosed by central adjudication. RESULTS: The C-statistic with 95% confidence intervals (CI) for diagnosing MI by using a common population (n=241) was 0.95 (0.91-0.99), 0.95 (0.91-0.99), and 0.93 (0.89-0.97) for the Triage, Singulex, and PathFast assays, respectively. Of samples with detectable troponin, the absolute values had high Pearson (R(P)) and Spearman (R(S)) correlations and were R(P)=0.94 and R(S)=0.94 for Triage vs Singulex, R(P)=0.93 and R(S)=0.85 for Triage vs PathFast, and R(P)=0.89 and R(S)=0.73 for PathFast vs Singulex. CONCLUSIONS: In a single comparative population of ED patients with suspected ACS, the Triage Cardio3 TnI, PathFast, and Singulex TnI assays provided similar diagnostic performance for MI.
Acute Coronary Syndrome/*diagnosis
;
Biomarkers/analysis
;
Emergency Service, Hospital
;
Humans
;
Laboratories/standards
;
Myocardial Infarction/diagnosis
;
*Point-of-Care Systems
;
Prospective Studies
;
Reagent Kits, Diagnostic
;
Sensitivity and Specificity
;
Troponin I/*analysis
10.Development of a Novel Quality Improvement Indicator Based on the Hemolysis Index.
Eun Jin LEE ; Miyoung KIM ; Han Sung KIM ; Min Jeong PARK ; Young Kyung LEE ; Hee Jung KANG
Annals of Laboratory Medicine 2016;36(6):599-602
Hemolysis frequently causes preanalytical errors in laboratory measurements. We aimed to develop a quality improvement indicator for evaluating the extent of inappropriate procedures causing hemolysis in clinical samples collected in medical care units. We defined the threshold value of the hemolysis index (H index) causing significant interference with analyte measurement and analyzed the H index values of clinical samples in relation to the threshold. The H index threshold value causing a 10% bias in the measurement of lactate dehydrogenase was found to be 25. The monthly mean H index and monthly frequency of samples with an H index >25 were significantly different among the types of ward (P=0.001, respectively), and significantly decreased after replacement of a laboratory centrifuge lacking temperature control (20.6±0.58 vs 23.30±1.08, P=0.01; 23.4±1.69% vs 32.6±1.78%, P=0.01). The monthly mean H index and the monthly frequency of samples with an H index above a threshold value may be useful quality improvement indicators for detection of inappropriate procedures in the acquisition and handling of blood samples in medical care units.
Hemoglobins/analysis
;
Hemolysis
;
Humans
;
L-Lactate Dehydrogenase/analysis
;
Laboratories, Hospital/*standards
;
Quality Improvement/*standards
;
Specimen Handling

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