1.Transaminases: high-throughput screening via a ketone-fluorescent probe and applications.
Hongbo YE ; Qingye LI ; Xiaoling TANG ; Renchao ZHENG
Chinese Journal of Biotechnology 2025;41(1):416-426
Transaminases are a class of enzymes that catalyze the transfer of amino between amino acids and keto acids, playing an important role in the biosynthesis of organic amines and the corresponding derivatives. However, natural enzymes often have low catalytic efficiency against non-natural substrates, which limits their widespread applications. Enzyme engineering serves as an effective approach to improve the catalytic properties and thereby expand the application scope of transaminases. In this study, a high-throughput screening method for transaminases was established based on the fluorescent color reaction between methoxy-2-aminobenzoxime (PMA) and ketones. According to the changes in fluorescence intensity, the concentration changes of ketones could be easily monitored. The efficiency, sensitivity, and accuracy of the screening method were improved by optimization of the system. With 4-hydroxy-2-butanone as the substrate, the mutant library of the transaminase from Actinobacteria sp. was established and a mutant with increased activity was successfully obtained, which improved the production efficiency of (R)-3-aminobutanol by enzyme-catalyzed synthesis. This study laid an important foundation for efficient screening, modification, and application of transaminase.
Transaminases/metabolism*
;
Fluorescent Dyes/chemistry*
;
High-Throughput Screening Assays/methods*
;
Ketones/metabolism*
;
Actinobacteria/enzymology*
2.Gleevec induces apoptosis in K562 cells through activating caspase-3.
Qiao-Hong PU ; Qing-Qing WU ; Xiao-Bao JIN ; Wei-Zhang WANG
Acta Pharmaceutica Sinica 2014;49(8):1124-1129
The present study is to elucidate the mechanisms underlying Gleevec-induced apoptosis of chronic myeloid leukemia (CML) K562 cells in vitro. The apoptotic cell death and cell cycle distribution after Gleevec treatment and the effect of PDCD4 siRNA on Gleevec-induced apoptosis of K562 cells were analyzed by flow cytometry. The effect of Gleevec on p-Crkl, caspase-3, PARP and PDCD4 protein levels, and the knockdown efficacy of PDCD4 siRNA were detected by Western blotting. The results showed that Gleevec dramatically suppressed the phosphorylation level of Crkl in a dose-dependent manner and induced significant apoptosis and G0/G1 cell cycle arrest of K562 cells in time- and dose-dependent manners. In addition, Gleevec activated caspase-3 and its downstream substrates PARP, and the caspase pan inhibitor Z-VAD-FMK (50 micromol x L(-1)) markedly reduced Gleevec-induced apoptosis from 47.97% +/- 10.56% to 31.05% +/- 9.206% (P < 0.05). Moreover, Gleevec significantly increased the protein expression of programmed cell death 4 (PDCD4). PDCD4 knockdown by siRNA reduced Gleevec-induced apoptosis from 46.97% +/- 14.32% to 42.8% +/- 11.43%. In summary, Gleevec induced apoptosis in K562 cells via caspase-3 activation.
Amino Acid Chloromethyl Ketones
;
Apoptosis
;
drug effects
;
Benzamides
;
pharmacology
;
Caspase 3
;
metabolism
;
Cell Cycle
;
drug effects
;
Humans
;
Imatinib Mesylate
;
K562 Cells
;
Phosphorylation
;
Piperazines
;
pharmacology
;
Pyrimidines
;
pharmacology
3.Strategy to solve cofactor issues in oxidoreductase catalyzed biocatalytic applications.
Jinpeng JIANG ; Xuri WU ; Yijun CHEN
Chinese Journal of Biotechnology 2012;28(4):410-419
NAD(P)(H)-dependent oxidoreductase catalyzes the reduction of ketones or aldehydes to prepare a wide variety of valuable chiral alcohols or amines. However, expensive cofactors are absolutely required for the biocatalytic processes with oxidoreductases, which severely hinder their industrial applications. Consequently, the issue on reducing cofactor costs has become one of the major focuses in the field of biocatalysis. With the substantial development in recent years, a number of strategies have been proposed and implemented to solve the cofactor issues in the oxidoreductase catalyzed biocatalysis, including the establishment of cofactor regeneration system, the improvement of endogenous cofactor availability via metabolic engineering and the development of biomimetic agents to replace cofactors. In this review, recent trends and advances on these strategies are presented, and respective advantages and shortcomings are also discussed with a number of examples.
Alcohols
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metabolism
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Biocatalysis
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Ketones
;
metabolism
;
Metabolic Engineering
;
NADH, NADPH Oxidoreductases
;
metabolism
;
Oxidation-Reduction
4.Studies on metabolism of total terpene ketones from Swertia mussotii with human intestinal bacteria.
Shuang LI ; Cheng-Wang TIAN ; Shuai WU ; Xiu-Wei YANG ; Li-Li WANG ; Tie-Jun ZHANG
China Journal of Chinese Materia Medica 2012;37(24):3743-3747
OBJECTIVETo study the metabolism of total terpene ketones from Swertia mussotii with human intestinal bacteria.
METHODTotal terpene ketones were incubated with human intestinal bacteria under an anaerobic environment and at 37 degrees C. The metabolites were extracted by ethyl acetate processing, detected by HPLC-DAD method. A qualitative analysis was made for its metabolites by HPLC-MS.
RESULTEight metabolites were detected from total terpene ketones from S. mussotii with human intestinal bacteria, and two of them were preliminarily identified as gentianine and mangiferin aglycon.
CONCLUSIONTotal terpene ketones can be metabolized with human intestinal bacteria, which provides basis for experiments on the metabolism process total terpene ketones from S. mussotii with human intestinal bacteria.
Alkaloids ; metabolism ; Anaerobiosis ; Bacteria ; metabolism ; Chromatography, High Pressure Liquid ; Humans ; Intestines ; metabolism ; microbiology ; Ketones ; metabolism ; Mass Spectrometry ; Swertia ; metabolism ; Terpenes ; metabolism ; Xanthones ; metabolism
5.Research on the extracorporeal cytocompatibility of a composite of HA, carbon fiber and polyetheretherket-one.
Xueyong LIU ; Chunbo DENG ; Jiquan LIU ; Jianjun LI ; Guoxin SUI
Journal of Biomedical Engineering 2011;28(6):1159-1164
The present research was to study the biocompatibility of a composite of hydroxyapatite (HA), carbon fiber (CF) and polyetheretherket-one (PEEK) by co-culturing with the osteoblasts in vitro. Cell relative growth (RGR) was used as a quantitative assessment for cytotoxicity of the biomaterials by CCK-8. The proliferation index of the co-cultured cells and ALP activity was measured to study the effect of PEEK-HA-CF composites. Morphological properties of the osteoblast cells in vitro were observed by scanning electro-microscopy (SEM). The PEEK-HA-CF materials have no cytotoxicity to osteoblasts. The proliferation index of PEEK-HA-CF was higher than that of Ti alloy group, but these was no significant difference compared to that of control group. The ALP activity was the highest on PEEK-HA-CF composites surface after 7 days. The osteoblast cells co-cultured with the PEEK-HA-CF composite were adhered well to the biomaterial as observed under the SEM. The results suggested that the PEEK-HA-CF composites had good biocompatibility in vitro and might be a novel orthopedic implanted material.
Alkaline Phosphatase
;
metabolism
;
Animals
;
Biocompatible Materials
;
Carbon
;
chemistry
;
Cell Proliferation
;
drug effects
;
Cells, Cultured
;
Durapatite
;
chemistry
;
Ketones
;
chemistry
;
Orthopedics
;
Osteoblasts
;
chemistry
;
Polyethylene Glycols
;
chemistry
;
Prostheses and Implants
;
Rats
6.Apoptosis inducing factor mediates cisplatin-induced apoptosis of renal tubular epithelial cells.
Ye LIU ; Ye GUO ; Hui-juan WU ; Zhi-gang ZHANG ; Mu-yi GUO
Chinese Journal of Oncology 2010;32(3):173-178
OBJECTIVETo investigate the involvement of apoptosis inducing factor (AIF) in caspase-independent pathway mediating apoptosis of cultured renal tubular epithelial cells induced by cisplatin (CP).
METHODSWestern Blot analysis and real-time PCR were performed to detect cytosol AIF (cAIF), nuclear AIF (nAIF) and AIF mRNA expression in cultured renal epithelial cells (HK-2) treated with cisplatin (CP) at various concentrations (0 - 200 micromol/L) and time courses (0 - 12 h). Immunofluorescence analysis was used to detect the AIF protein distribution in HK-2 cells. Pan-caspase inhibitor (Z-VAD-FMK) and AIF-siRNA treatment, TUNEL and flow cytometer were used to measure the suppression of apoptosis induced by CP in HK-2 cells.
RESULTSThe expressions of cAIF, nAIF protein and AIF mRNA were all increased to some extent in HK-2 cells treated with CP at various concentrations and time points. cAIF expression was 2.3-fold (P < 0.05) increased after 25 micromol/L CP treatment for 12 h and 1.7-fold (P < 0.01) increased after 50 micromol/L CP treatment for 3 h, compared with that of control groups, and showed a concentration- and time-dependent increment. The nAIF expression reached a peak (4.3-fold increase) (P < 0.005) after 150 micromol/L CP treatment for 12 h and 3.7-fold incease (P < 0.05) after 50 micromol/L CP treatment for 9 h, compared with that of the 25 micromol/L group and 3 h group, respectively. The expression of nAIF was approximately consistent with cleaved-PARP expressive pattern. Real-time PCR showed that AIF mRNA increased gradually with prolonged treatment with 50 micromol/L CP and reached a peak at 9 h. Immunofluorescence assay showed AIF translocation from cytosol to nuclei in some cultured HK-2 cells treated with CP. Applying pan-caspase inhibitor (Z-VAD-FMK) and AIF-siRNA to CP-treated HK-2 cells, the apoptotic rates were decreased by 60.1% and 39.2%, respectively. The inhibitory effect on HK-2 cell apoptosis was even more significant with combination of both Z-VAD-FMK and AIF-siRNA.
CONCLUSIONThe AIF activation and translocation to nuclei with the increment of its mRNA expression mediates CP-induced apoptosis of renal tubular epithelial cells in vitro. It may provide a new therapeutic target for protecting from nephrotoxciity of cisplatin.
Amino Acid Chloromethyl Ketones ; pharmacology ; Antineoplastic Agents ; administration & dosage ; pharmacology ; Apoptosis ; drug effects ; Apoptosis Inducing Factor ; genetics ; metabolism ; Caspase Inhibitors ; Cell Nucleus ; metabolism ; Cells, Cultured ; Cisplatin ; administration & dosage ; pharmacology ; Cytosol ; metabolism ; Dose-Response Relationship, Drug ; Drug Synergism ; Epithelial Cells ; cytology ; metabolism ; Humans ; Kidney Tubules ; cytology ; Protein Transport ; RNA Interference ; RNA, Messenger ; metabolism ; RNA, Small Interfering ; genetics
7.Apoptosis-dependent acute pulmonary injury after intratracheal instillation of angiotensin II.
Jia-Ju ZHUANG ; Xiao-Peng LI ; Bruce David UHAL ; Koh Rhun YIAN
Acta Physiologica Sinica 2008;60(6):715-722
To test the hypothesis that exogenous purified angiotensin II (ANG) might cause apoptosis of alveolar epithelial cells (AECs) and acute lung injury, male Wistar rats were intratracheally instilled with purified ANG (10 mumol/L), ANG plus the caspase inhibitor ZVAD-fmk (60 mumol/L), ANG plus the ANG receptor AT1 antagonist losartan (LOS, 100 mumol/L) or sterile phosphate-buffered saline (PBS) vehicle alone. Six or 20 h later, the lungs were lavaged in situ for determination of bronchoalveolar lavage (BAL) fluid content of hemoglobin (Hb) and fluorescent (BODIPY)-albumin, a bolus of which was injected intravenously 15 min prior to BAL. Terminal deoxynucleotidyl transferase-mediated nick-end labeling (TUNEL) revealed that instillation of ANG, but not PBS alone, increased labeling of fragmented DNA in bronchiolar epithelial cells and in AECs (P<0.05) at 6 h post-ANG. Increased TUNEL was abrogated by concurrent instillation of ZVAD-fmk or LOS. Significant increased numbers of caspase-positive cells were observed by anti-caspase 3 immunolabeling after instillation of ANG (P<0.01); the same doses of LOS or ZVAD-fmk that blocked TUNEL also blocked the activation of caspase 3 (P<0.01). Intratracheal instillation of ANG also remarkably increased BAL BODIPY-albumin (P< 0.01) and Hb (P<0.05), both of which were eliminated by ZVAD-fmk or LOS. These data indicate that exposure of AECs to ANG in vivo is sufficient to induce apoptosis and alveolar epithelial barrier injury mediated by ANG receptor AT1.
Amino Acid Chloromethyl Ketones
;
pharmacology
;
Angiotensin II
;
adverse effects
;
Angiotensin II Type 1 Receptor Blockers
;
pharmacology
;
Animals
;
Apoptosis
;
Caspase 3
;
metabolism
;
Caspase Inhibitors
;
pharmacology
;
Epithelial Cells
;
pathology
;
Losartan
;
pharmacology
;
Lung Injury
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chemically induced
;
pathology
;
Male
;
Rats
;
Rats, Wistar
;
Receptor, Angiotensin, Type 1
;
metabolism
8.Synthesis and antiinflammation activity of aromatic aminoketone compounds, a new type of PAF-receptor antagonist.
Li-yuan MOU ; Zi-yun LIN ; Jie LIU ; Qi-dong ZHANG ; Li-ya ZHU ; Wen-jie WANG ; Zhen-gui NIE ; Yu HE
Acta Pharmaceutica Sinica 2008;43(9):917-925
A series of aromatic aminoketones were synthesized by Mannich reaction. Structures of these compounds were confirmed by 1H NMR, MS and HRMS or element analysis. Pharmacological screening showed that most target compounds inhibited the release of beta-glucuronidase in polymorphonuclear leucocytes by PAF (platelet activating factor) and compounds MA12, MA13, MA18, MA21 and MA33 were more active. The study suggests that target compounds are potential PAF receptor antagonists and their anti-inflammatory activities are due to the inhibition of release of lysosomal enzyme.
Animals
;
Anti-Inflammatory Agents
;
chemical synthesis
;
chemistry
;
pharmacology
;
therapeutic use
;
Arthritis, Rheumatoid
;
drug therapy
;
Glucuronidase
;
metabolism
;
Ketones
;
chemical synthesis
;
chemistry
;
pharmacology
;
therapeutic use
;
Macrophages, Peritoneal
;
metabolism
;
Mice
;
Neutrophils
;
enzymology
;
Platelet Membrane Glycoproteins
;
antagonists & inhibitors
;
Rats
;
Receptors, G-Protein-Coupled
;
antagonists & inhibitors
;
Structure-Activity Relationship
;
Tumor Necrosis Factor-alpha
;
biosynthesis
9.Human Telomerase Reverse Transcriptase (hTERT): A Target Molecule for the Treatment of Cisplatin-resistant Tumors.
Yuk Pheel PARK ; Kwang Dong KIM ; Seong Ho KANG ; Do Young YOON ; Joo Won PARK ; Jong Wan KIM ; Hee Gu LEE
The Korean Journal of Laboratory Medicine 2008;28(6):430-437
BACKGROUND: Human telomerase reverse transcriptase (hTERT) is a catalytic enzyme that is required for telomerase activity (TA) and cancer progression. Telomerase inhibition or inactivation increases cellular sensitivity to UV irradiation, DNA-damaging agents, the tyrosine kinase inhibitor, imatinib, and pharmacological inhibitors, such as BIBR1532. hTERT is associated with apoptosis. Some patients show drug-resistance during anti-cancer drug treatment and the cancer cell acquire anti-apoptotic mechanism. Therefore, we attempted to study correlation between hTERT and drug-resistance. METHODS: To study the correlation between protein level and activity of hTERT and drug-resistance, Western blotting and telomerase repeat amplification protocol (TRAP) assays were performed. To investigate whether hTERT contributes to drug resistance in tumor cells, we transiently decreased hTERT levels using small interfering RNA (siRNA) in T24/R2 cells. RESULTS: hTERT knockdown increased Bax translocation into the mitochondria and cytochrome C release into the cytosol. Caspase inhibitors, especially Z-VAD-FMK, rescued this phenomenon, suggesting that the stability or expression of hTERT might be regulated by caspase activity. CONCLUSIONS: These data suggest that hTERT might be a target molecule for drug-resistant tumor therapy.
Amino Acid Chloromethyl Ketones/pharmacology
;
Antineoplastic Agents/*pharmacology
;
Caspases/antagonists & inhibitors/metabolism
;
Cell Line, Tumor
;
Cisplatin/*pharmacology
;
Cysteine Proteinase Inhibitors/pharmacology
;
Cytochrome c Group/metabolism
;
Drug Resistance, Neoplasm/genetics
;
Humans
;
Neoplasms/therapy
;
RNA, Small Interfering
;
Telomerase/*antagonists & inhibitors/genetics/metabolism
;
bcl-2-Associated X Protein/metabolism
10.TAp63gamma-induced apoptosis mediated by apoptosis inducing factor in human esophageal squamous carcinoma EC9706 cells.
Tian-li FAN ; Yi-bin HAO ; Pei-rong XU ; Gui-qin HOU ; Guo-zhong JIANG ; Guan-rui YANG
Chinese Journal of Pathology 2007;36(6):384-389
OBJECTIVETo study the molecular mechanism of TAp63gamma-induced cell apoptosis.
METHODSTranscription and protein expression of apoptosis inducing factor and p63 were investigated by immunohistochemistry and RT-PCR in human esophageal squamous carcinoma cell line EC9706 respectively. Twenty-four hours after transfection with pcDNA3.1-TAp63gamma, the apoptosis and translocation of apoptosis inducing factor in EC9706 cells were studied by flow cytometry, laser confocal microscopy and mitochondrial/cytosol/nuclear extraction analysis respectively. Down-regulation of apoptosis inducing factor protein was achieved by RNAi and pretreatment with caspase inhibitor zVAD.fmk of EC9706 cells.
RESULTSPresence of protein expressions of apoptosis inducing factor and absence of TAp63gamma was observed in the cytoplasm of untransfected cells. RT-PCR verified the subtype of p63 in EC9706 cells was DeltaNp63. After 24 hours of transfection, both nuclear and cytoplasmic expression of apoptosis inducing factor protein were observed in cells transfected with TAp63gamma and p53 expression vectors, but not in cells transfected with control vector. Cell apoptosis rates were 1.37%, 13.64%, 4.52%, 4.03% and 1.91% in the pcDNA3.1 transfection group, pcDNA3.1-TAp63gamma transfection group, apoptosis inducing factor siRNA and pcDNA3.1-TAp63gamma transfection group, zVAD.fmk treatment group, and the group receiving apoptosis inducing factor siRNA, plus zVAD.fmk treatment and pcDNA3.1-TAp63gamma transfection, respectively.
CONCLUSIONSApoptosis inducing factor of EC9706 cells is released from mitochondria into both the cytoplasm and nucleus during TAp63gamma induced apoptosis. Down-regulation of apoptosis inducing factor inhibits TAp63gamma-induced apoptosis. Overall, TAp63gamma-induced apoptosis is dependent on the expression of apoptosis inducing factor and caspase.
Amino Acid Chloromethyl Ketones ; pharmacology ; Apoptosis ; Apoptosis Inducing Factor ; genetics ; metabolism ; Carcinoma, Squamous Cell ; metabolism ; pathology ; Caspase Inhibitors ; Cell Line, Tumor ; Cell Nucleus ; metabolism ; Cytoplasm ; metabolism ; Down-Regulation ; Esophageal Neoplasms ; metabolism ; pathology ; Humans ; Mitochondria ; metabolism ; Plasmids ; Protein Transport ; RNA Interference ; RNA, Small Interfering ; genetics ; Trans-Activators ; genetics ; metabolism ; Transcription Factors ; Transfection ; Tumor Suppressor Proteins ; genetics ; metabolism

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