1.Research progress in active substances and their mechanisms of action against porcine epidemic diarrhea virus.
Yu LIU ; Sisi SU ; Ziqian WANG ; Jiahao WU ; Hongwei CHEN ; Hongzao YANG
Chinese Journal of Biotechnology 2025;41(7):2519-2533
Porcine epidemic diarrhea virus (PEDV) is an intestinal coronavirus that can cause porcine epidemic diarrhea, leading to diarrhea, vomiting, weight loss, and even death in piglets. Due to the diversity of PEDV strains, traditional vaccines are difficult to sustainably and effectively prevent and control PEDV. This article reviews the strategies and mechanisms of active substances in regulating intracellular signaling pathways, viral proteins, and microbial metabolites to enhance the host immune function against PEDV. It emphasizes the prevention of PEDV resistance and the potential harm of PEDV breaking through interspecies barriers to the human society, aiming to provide reliable theoretical support for the development of new antiviral drugs or vaccines.
Porcine epidemic diarrhea virus/immunology*
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Animals
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Swine
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Swine Diseases/prevention & control*
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Antiviral Agents/pharmacology*
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Coronavirus Infections/virology*
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Viral Vaccines/immunology*
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Humans
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Signal Transduction
2.Screening of active components in Chinese medicine with effects on Escherichia coli biofilm based on molecular docking.
Can YANG ; Lei RAN ; Zhuo YANG ; Huiming HU ; Wei WEI ; Hongzao YANG ; Maixun ZHU ; Yuandi YU ; Lizhi FU ; Hongwei CHEN
Chinese Journal of Biotechnology 2024;40(11):4120-4137
By targeting the key gene csgD involved in the biofilm formation of Escherichia coli, we employed molecular docking and molecular dynamics simulation to screen the active components of Chinese medicine with inhibitory effects on the biofilm formation from the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP). After the anti-biofilm properties of the active components were validated in vitro, data-independent acquisition (DIA) proteomics was employed to further identify the differential proteins involved in interfering with the biofilm formation of Escherichia coli. The mechanisms of inhibition were explored with consideration to the phenotype. Through virtual screening, we identified four candidate active components, including tannic acid, narirutin, salvianolic acid B, and rosmarinic acid. Among them, tannic acid demonstrated significant inhibitory effect on the biofilm formation of E. coli. The analysis of differential proteins, combined with relevant phenotype validation, suggested that tannic acid primarily affected E. coli by intervening in pilus assembly, succinic acid metabolism, and the quorum sensing system. This study provided a lead compound for the development of new drugs against biofilm-associated infections in the future.
Biofilms/drug effects*
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Escherichia coli/metabolism*
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Molecular Docking Simulation
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Drugs, Chinese Herbal/chemistry*
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Tannins/chemistry*
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Cinnamates/metabolism*
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Benzofurans/chemistry*
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Depsides/metabolism*
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Rosmarinic Acid
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Anti-Bacterial Agents/chemistry*
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Escherichia coli Proteins/genetics*
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Medicine, Chinese Traditional

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