1.The study of the gene expression profiles in the blood of 1-week-old broilers with dietary nutrient modulation
Hyunji CHOI ; Wonchoul PARK ; Dajeong LIM ; Eui-Chul HONG ; Han-Ha CHAI
Journal of Biomedical and Translational Research 2025;26(4):85-96
The nutrient composition of feed plays a crucial role in regulating gene expression in animals,thereby affecting growth, metabolism, and immune functions. In poultry, the optimized use offeed additives such as crude protein and phytase can enhance nutrient absorption, improvefeed efficiency, and reduce environmental waste. In this study, we investigated the transcriptomic changes in the blood of forty-eight one-week-old broiler chickens fed diets differing in crude protein and phytase content. Using RNA sequencing and bioinformatic analysis, a total of 44 differentially expressed genes were identified in response to dietary variation. These genes were primarily involved in immune response, regulation of cell morphology, glycolytic process, and glycerolipid metabolism. Functional enrichment analysis revealed significant associations with cytokine–cytokine receptor interaction pathways, which regulate lipid metabolism, cellular proliferation, differentiation, and inflammatory responses. Moreover, decreased levels of crude protein and phytase were linked to alterations in protein autophosphorylation, amino acid biosynthesis, and energy metabolism pathways. These findings indicate that dietary modulation of crude protein and phytase levels can significantly influence metabolic and immune regulatory mechanisms in early-stage broilers. The appropriate feeding of feed additives (such as crude protein and phytase) not only improves nutritional deficiencies and feed efficiency issues in livestock, but also contributes to sustainable meat production, includ-ing the reduction of nitrogen and ammonia emissions, thereby supporting environmentallyresponsible poultry production.
2.Usefulness of Real-Time Quantitative Microvascular Ultrasonography for Differentiation of Graves’ Disease from Destructive Thyroiditis in Thyrotoxic Patients
Han-Sang BAEK ; Ji-Yeon PARK ; Chai-Ho JEONG ; Jeonghoon HA ; Moo Il KANG ; Dong-Jun LIM
Endocrinology and Metabolism 2022;37(2):323-332
Background:
Microvascular ultrasonography (MVUS) is a third-generation Doppler technique that was developed to increase sensitivity compared to conventional Doppler. The purpose of this study was to compare MVUS with conventional color Doppler (CD) and power Doppler (PD) imaging to distinguish Graves’ disease (GD) from destructive thyroiditis (DT).
Methods:
This prospective study included 101 subjects (46 GDs, 47 DTs, and eight normal controls) from October 2020 to November 2021. All ultrasonography examinations were performed using microvascular flow technology (MV-Flow). The CD, PD, and MVUS images were semi-quantitatively graded according to blood flow patterns. On the MVUS images, vascularity indices (VIs), which were the ratio (%) of color pixels in the total grayscale pixels in a defined region of interest, were obtained automatically. Receiver operating characteristic curve analysis was performed to verify the diagnostic performance of MVUS. The interclass correlation coefficient and Cohen’s kappa analysis were used to analyze the reliability of MVUS (ClinicalTrials.gov:NCT04879173).
Results:
The area under the curve (AUC) for CD, PD, MVUS, and MVUS-VI was 0.822, 0.844, 0.808, and 0.852 respectively. The optimal cutoff value of the MVUS-VI was 24.95% for distinguishing GD and DT with 87% sensitivity and 80.9% specificity. We found a significant positive correlation of MVUS-VI with thyrotropin receptor antibody (r=0.554) and with thyroid stimulating immunoglobulin bioassay (r=0.841). MVUS showed high intra- and inter-observer reliability from various statistical method.
Conclusion
In a real time and quantitative manner, MVUS-VI could be helpful to differentiate GD from thyroiditis in thyrotoxic patients, with less inter-observer variability.
4.Accuracy of Imputation of Microsatellite Markers from BovineSNP50 and BovineHD BeadChip in Hanwoo Population of Korea.
Aditi SHARMA ; Jong Eun PARK ; Byungho PARK ; Mi Na PARK ; Seung Hee ROH ; Woo Young JUNG ; Seung Hwan LEE ; Han Ha CHAI ; Gul Won CHANG ; Yong Min CHO ; Dajeong LIM
Genomics & Informatics 2018;16(1):10-13
Until now microsatellite (MS) have been a popular choice of markers for parentage verification. Recently many countries have moved or are in process of moving from MS markers to single nucleotide polymorphism (SNP) markers for parentage testing. FAO-ISAG has also come up with a panel of 200 SNPs to replace the use of MS markers in parentage verification. However, in many countries most of the animals were genotyped by MS markers till now and the sudden shift to SNP markers will render the data of those animals useless. As National Institute of Animal Science in South Korea plans to move from standard ISAG recommended MS markers to SNPs, it faces the dilemma of exclusion of old animals that were genotyped by MS markers. Thus to facilitate this shift from MS to SNPs, such that the existing animals with MS data could still be used for parentage verification, this study was performed. In the current study we performed imputation of MS markers from the SNPs in the 500-kb region of the MS marker on either side. This method will provide an easy option for the labs to combine the data from the old and the current set of animals. It will be a cost efficient replacement of genotyping with the additional markers. We used 1,480 Hanwoo animals with both the MS data and SNP data to impute in the validation animals. We also compared the imputation accuracy between BovineSNP50 and BovineHD BeadChip. In our study the genotype concordance of 40% and 43% was observed in the BovineSNP50 and BovineHD BeadChip respectively.
Animals
;
Cattle
;
Genotype
;
Korea*
;
Methods
;
Microsatellite Repeats*
;
Polymorphism, Single Nucleotide
5.Demographic Trends in Korean Native Cattle Explained Using Bovine SNP50 Beadchip.
Aditi SHARMA ; Dajeong LIM ; Han Ha CHAI ; Bong Hwan CHOI ; Yongmin CHO
Genomics & Informatics 2016;14(4):230-233
Linkage disequilibrium (LD) is the non-random association between the loci and it could give us a preliminary insight into the genetic history of the population. In the present study LD patterns and effective population size (Ne) of three Korean cattle breeds along with Chinese, Japanese and Mongolian cattle were compared using the bovine Illumina SNP50 panel. The effective population size (Ne) is the number of breeding individuals in a population and is particularly important as it determines the rate at which genetic variation is lost. The genotype data in our study comprised a total of 129 samples, varying from 4 to 39 samples. After quality control there were ~29,000 single nucleotide polymorphisms (SNPs) for which r² value was calculated. Average distance between SNP pairs was 1.14 Mb across all breeds. Average r² between adjacent SNP pairs ranged between was 0.1 for Yanbian to 0.3 for Qinchuan. Effective population size of the breeds based on r² varied from 16 in Hainan to 226 in Yanbian. Amongst the Korean native breeds effective population size of Brindle Hanwoo was the least with Ne = 59 and Brown Hanwoo was the highest with Ne = 83. The effective population size of the Korean cattle breeds has been decreasing alarmingly over the past generations. We suggest appropriate measures to be taken to prevent these local breeds in their native tracts.
Animals
;
Asian Continental Ancestry Group
;
Breeding
;
Cattle*
;
Family Characteristics
;
Genetic Variation
;
Genotype
;
Humans
;
Korea
;
Linkage Disequilibrium
;
Polymorphism, Single Nucleotide
;
Population Density
;
Quality Control
6.Current Status of Human Taeniasis in Lao People's Democratic Republic.
Hyeong Kyu JEON ; Tai Soon YONG ; Woon Mok SOHN ; Jong Yil CHAI ; Duk Young MIN ; Cheong Ha YUN ; Han Jong RIM ; Tiengkham PONGVONGSA ; Virasack BANOUVONG ; Bounnaloth INSISIENGMAY ; Bounlay PHOMMASACK ; Keeseon S EOM
The Korean Journal of Parasitology 2013;51(2):259-263
Human taeniasis was investigated in Lao People's Democratic Republic (Lao PDR) between 2000 and 2011 as part of the nation's helminthiasis survey. A total of 55,038 inhabitants, including 29,846 school children, were examined using the Kato-Katz and scotch-tape anal swab method, and morphological observation of adult worms. Molecular identification of Taenia tapeworms was performed by multiplex PCR or DNA sequence analysis of the mitochondrial cox1 gene. Taenia eggs were present at a rate of 1.5% (845/55,038) in the subject population. Adult tapeworms were identified as T. solium or T. saginata by analyzing the collectable stool specimens (n=126). Three specimens identified as T. solium were found in Luang Prabang, while the remaining 123 specimens, which were T. saginata, were found in Bokeo, Bolikhamxay, Champasak, Houaphan, Khammouane, Luang Namta, Luang Prabang, Oudomxay, Phongsaly, Saysomboune, Saravane, Savannakhet, Xayaboury, Xekong, Xieng Khouang Province, and Vientiane Municipality.
Adolescent
;
Adult
;
Aged
;
Anal Canal/parasitology
;
Animals
;
Child
;
Female
;
Humans
;
Laos/epidemiology
;
Male
;
Microscopy
;
Middle Aged
;
Polymerase Chain Reaction
;
Prevalence
;
Taenia saginata/isolation & purification
;
Taenia solium/isolation & purification
;
Taeniasis/*epidemiology/parasitology
7.Serologic Survey of Toxoplasmosis in Seoul and Jeju-do, and a Brief Review of Its Seroprevalence in Korea.
Hyemi LIM ; Sang Eun LEE ; Bong Kwang JUNG ; Min Ki KIM ; Mi Youn LEE ; Ho Woo NAM ; Jong Gyun SHIN ; Cheong Ha YUN ; Han Ik CHO ; Eun Hee SHIN ; Jong Yil CHAI
The Korean Journal of Parasitology 2012;50(4):287-293
Knowledge of the prevalence of human Toxoplasma gondii infection is required in the Republic of Korea. In this study, we surveyed the seroprevalence of T. gondii infection and analyzed the risk factors associated with seropositivity among residents in 2 administrative districts; Seoul and the island of Jeju-do, which have contrasting epidemiologic characteristics. Sera and blood collected from 2,150 residents (1,114 in Seoul and 1,036 in Jeju-do) were checked for IgG antibody titers using ELISA and for the T. gondii B1 gene using PCR. In addition, participants completed a questionnaire that solicited information on gender, age, occupation, eating habits, history of contact with animals, and travel abroad. The T. gondii B1 gene was not detected in all residents examined. However, ELISA showed 8.0% (89 of 1,114 sera) positive for IgG antibodies against T. gondii in Seoul and 11.3% (117 of 1,036 sera) in Jeju-do. In both districts, the positive rates were higher in males than in females, and those 40-79 years of age showed higher rates than other ages. In Seoul, residents older than 70 years of age showed the highest positive rate, 14.9%, whereas in Jeju-do the highest prevalence, 15.6%, was in those in their sixties. The higher seropositive rate in Jeju-do than in Seoul may be related to eating habits and occupations. The present results and a review of related literature are indicative of an increased seroprevalence of T. gondii in Korea in recent years.
Adolescent
;
Adult
;
Age Factors
;
Aged
;
Aged, 80 and over
;
Animals
;
Antibodies, Protozoan/*blood
;
Child
;
DNA, Protozoan/blood
;
Female
;
Humans
;
Immunoglobulin G/*blood
;
Male
;
Mice
;
Mice, Inbred BALB C
;
Middle Aged
;
Republic of Korea/epidemiology
;
Risk Factors
;
Seroepidemiologic Studies
;
Sex Factors
;
Toxoplasma/genetics/*immunology
;
Toxoplasmosis/*epidemiology/parasitology
;
Young Adult
8.A survey of Heterophyes nocens and Pygidiopsis summa metacercariae in mullets and gobies along the coastal areas of the Republic of Korea.
Sang Mee GUK ; Eun Hee SHIN ; Jae Lip KIM ; Woon Mok SOHN ; Kwang Sun HONG ; Cheong Ha YOON ; Soon Hyung LEE ; Han Jong RIM ; Jong Yil CHAI
The Korean Journal of Parasitology 2007;45(3):205-211
The infection status of mullets Mugil cephalus (n = 139) and gobies (n = 35) Acanthogobius flavimanus with metacercariae of Heterophyes nocens and Pygidiopsis summa was examined in 11 western, southern, and eastern coastal areas of the Republic of Korea, using a digestion technique. Heterophyid metacercariae were highly prevalent in mullets from western and southern coastal areas; Shinan-gun (100% for H. nocens and 100% for P. summa), Muan-gun (93% and 100%), Buan-gun (42% and 75%), Seocheon-gun (73% and 53%), Ganghwa-gun (47% and 100%), Sacheon-shi (47% and 77%), and Gangjin-gun (50% and 70%, respectively). Only 1 (10%) of 10 mullets from an eastern coastal area, i.e., Donghae-shi, was positive for P. summa metacercariae. Metacercarial densities were the highest in the trunk of mullets for H. nocens and the gill for P. summa. Gobies from Muan-gun were positive for H. nocens (40%) and P. summa metacercariae (40%), and gobies from Seocheon-gun revealed H. nocens metacercariae (20%). The metacercarial density was remarkably higher in mullets than in gobies. The results revealed that H. nocens and P. summa metacercariae are prevalent in mullets and gobies from coastal areas of the Republic of Korea, and the prevalence and intensity of infection vary according to geographical locality.
Animals
;
Fish Diseases/*epidemiology/parasitology
;
Geography
;
Heterophyidae/isolation & purification/*pathogenicity
;
Korea/epidemiology
;
Life Cycle Stages
;
Perciformes/*parasitology
;
Population Surveillance
;
Prevalence
;
Smegmamorpha/*parasitology
;
Trematode Infections/epidemiology/*veterinary
9.A clinical review of continuous ambulatory peritoneal dialysis.
Jong Yeon JANG ; Woo Song HA ; Soon Tae PARK ; Sang Kyung CHOI ; Soon Chan HONG ; Ho Seong HAN ; Young Chai KIM
Journal of the Korean Surgical Society 1992;42(3):361-366
No abstract available.
Peritoneal Dialysis, Continuous Ambulatory*
10.Immunocytochemical study on the changes of the T lymphocytes and subsets in the peripheral blood of stomach cancer patients.
Woo Song HA ; Sang Kyung CHOI ; Ho Seong HAN ; Soon Chan HONG ; Soon Tae PARK ; Young Chai KIM ; Sun Young KIM ; Wan Sung CHOI
Journal of the Korean Surgical Society 1991;40(3):290-297
No abstract available.
Humans
;
Stomach Neoplasms*
;
Stomach*
;
T-Lymphocytes*

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