1.Characteristics of amino acid metabolism in myeloid-derived suppressor cells in septic mice.
Yuan MA ; Yue ZHANG ; Rui LI ; Shu Wei DENG ; Qiu Shi QIN ; Liu Luan ZHU
Journal of Peking University(Health Sciences) 2022;54(3):532-540
OBJECTIVE:
To explore the amino acid metabolomics characteristics of myeloid-derived suppressor cells (MDSCs) in mice with sepsis induced by the cecal ligation and puncture (CLP).
METHODS:
The sepsis mouse model was prepared by CLP, and the mice were randomly divided into a sham operation group (sham group, n = 10) and a CLP model group (n = 10). On the 7th day after the operation, 5 mice were randomly selected from the surviving mice in each group, and the bone marrow MDSCs of the mice were isolated. Bone marrow MDSCs were separated to measure the oxygen consumption rate (OCR) by using Agilent Seahorse XF technology and to detect the contents of intracellular amino acids and oligopeptides through ultra-performance liquid chromatography/tandem mass spectrometry (UPLC-MS/MS) technology. Different metabolites and potential biomarkers were analyzed by univariate statistical analysis and multivariate statistical analysis. The major metabolic pathways were enriched using the small molecular pathway database (SMPDB).
RESULTS:
The proportion of MDSCs in the bone marrow of CLP group mice (75.53% ± 6.02%) was significantly greater than that of the sham group (43.15%± 7.42%, t = 7.582, P < 0.001), and the basal respiratory rate [(50.03±1.20) pmol/min], maximum respiration rate [(78.07±2.57) pmol/min] and adenosine triphosphate (ATP) production [(25.30±1.21) pmol/min] of MDSCs in the bone marrow of CLP group mice were significantly greater than the basal respiration rate [(34.53±0.96) pmol/min, (t = 17.41, P < 0.001)], maximum respiration rate [(42.57±1.87) pmol/min, (t = 19.33, P < 0.001)], and ATP production [(12.63±0.96) pmol/min, (t = 14.18, P < 0.001)] of sham group. Leucine, threonine, glycine, etc. were potential biomarkers of septic MDSCs (all P < 0.05). The increased amino acids were mainly enriched in metabolic pathways, such as malate-aspartate shuttle, ammonia recovery, alanine metabolism, glutathione metabolism, phenylalanine and tyrosine metabolism, urea cycle, glycine and serine metabolism, β-alanine metabolism, glutamate metabolism, arginine and proline metabolism.
CONCLUSION
The enhanced mitochondrial oxidative phosphorylation, malate-aspartate shuttle and alanine metabolism in MDSCs of CLP mice may provide raw materials for mitochondrial aerobic respiration, thereby promoting the immunosuppressive function of MDSCs. Blocking the above metabolic pathways may reduce the risk of secondary infection in sepsis and improve the prognosis.
Adenosine Triphosphate/metabolism*
;
Alanine/metabolism*
;
Animals
;
Aspartic Acid/metabolism*
;
Biomarkers/metabolism*
;
Chromatography, Liquid
;
Glycine/metabolism*
;
Malates/metabolism*
;
Mice
;
Myeloid-Derived Suppressor Cells/metabolism*
;
Sepsis/complications*
;
Tandem Mass Spectrometry
2.Synthesis of (S)-4-fluorophenylglycine by using immobilized amidase based on metal-organic framework.
Chaoping LIN ; Jiangtao TANG ; Renchao ZHENG ; Yuguo ZHENG
Chinese Journal of Biotechnology 2021;37(8):2936-2946
A stable Zr-based metal-organic framework (MOF, UiO-66-NH2) synthesized via micro-water solvothermal method was used to immobilize amidase by using the glutaraldehyde crosslinking method. The effect of immoblization conditions on enzyme immoblization efficiency was studied. An activity recovery rate of 86.4% and an enzyme loading of 115.3 mg/g were achieved under the optimal conditions: glutaraldehyde concentration of 1.0%, cross-linking time of 180 min, and the weight ratio of MOF to enzyme of 8:1. The optimal temperature and optimal pH of the immobilized amidase were determined to be 40 °C and 9.0, respectively, and the Km, Vmax and kcat of the immoblized amidase were 58.32 mmol/L, 16.23 μmol/(min·mg), and 1 670 s⁻¹, respectively. The immobilized enzyme was used for (S)-4-fluorophenylglycine synthesis and the optimal reaction conditions were 300 mmol/L of N-phenylacetyl-4-fluorophenylglycine, 10 g/L of immobilized enzyme loading, and reacting for 180 min at pH 9.0 and 40 °C. A conversion rate of 49.9% was achieved under the optimal conditions, and the conversion rate can be increased to 99.9% under the conditions of enantiomeric excess. The immobilized enzyme can be repeatedly used, 95.8% of its original activity can be retained after 20 cycles.
Amidohydrolases
;
Enzyme Stability
;
Enzymes, Immobilized/metabolism*
;
Glycine/analogs & derivatives*
;
Hydrogen-Ion Concentration
;
Metal-Organic Frameworks
;
Temperature
3.Catalytic mechanism, molecular engineering and applications of threonine aldolases.
Qijia CHEN ; Xi CHEN ; Jianxiong HAO ; Dunming ZHU
Chinese Journal of Biotechnology 2021;37(12):4215-4230
Threonine aldolases catalyze the aldol condensation of aldehydes with glycine to furnish β-hydroxy-α-amino acid with two stereogenic centers in a single reaction. This is one of the most promising green methods for the synthesis of optically pure β-hydroxy-α-amino acid with high atomic economy and less negative environmental impact. Several threonine aldolases from different origins have been identified and characterized. The insufficient -carbon stereoselectivity and the challenges of balancing kinetic versus thermodynamic control to achieve the optimal optical purity and yield hampered the application of threonine aldolases. This review summarizes the recent advances in discovery, catalytic mechanism, high-throughput screening, molecular engineering and applications of threonine aldolases, with the aim to provide some insights for further research in this field.
Amino Acids
;
Catalysis
;
Glycine
;
Glycine Hydroxymethyltransferase/metabolism*
;
Kinetics
;
Substrate Specificity
;
Threonine
4.Therapeutic Effects of Amino Acids in Liver Diseases: Current Studies and Future Perspectives
Journal of Cancer Prevention 2019;24(2):72-78
Hepatocellular carcinoma (HCC) is the most common primary malignant tumor of the liver and the third most common cause of cancer-related death worldwide. HCC is caused by infection of hepatitis B/C virus and liver dysfunctions, such as alcoholic liver disease, nonalcoholic fatty liver disease, and cirrhosis. Amino acids are organic substances containing amine and carboxylic acid functional groups. There are over 700 kinds of amino acids in nature, but only about 20 of them are used to synthesize proteins in cells. Liver is an important organ for protein synthesis, degradation and detoxification as well as amino acid metabolism. In the liver, there are abundant non-essential amino acids, such as alanine, aspartate, glutamate, glycine, and serine and essential amino acids, such as histidine and threonine. These amino acids are involved in various cellular metabolisms, the synthesis of lipids and nucleotides as well as detoxification reactions. Understanding the role of amino acids in the pathogenesis of liver and the effects of amino acid intake on liver disease can be a promising strategy for the prevention and treatment of liver disease. In this review, we describe the biochemical properties and functions of amino acids and to review how they have been applied to treatment of liver diseases.
Alanine
;
Amino Acids
;
Amino Acids, Essential
;
Aspartic Acid
;
Carcinoma, Hepatocellular
;
Fibrosis
;
Glutamic Acid
;
Glycine
;
Hepatitis
;
Histidine
;
Liver Diseases
;
Liver Diseases, Alcoholic
;
Liver
;
Metabolism
;
Non-alcoholic Fatty Liver Disease
;
Nucleotides
;
Serine
;
Therapeutic Uses
;
Threonine
5.Kir2.1 Channel Regulation of Glycinergic Transmission Selectively Contributes to Dynamic Mechanical Allodynia in a Mouse Model of Spared Nerve Injury.
Yiqian SHI ; Yangyang CHEN ; Yun WANG
Neuroscience Bulletin 2019;35(2):301-314
Neuropathic pain is a chronic debilitating symptom characterized by spontaneous pain and mechanical allodynia. It occurs in distinct forms, including brush-evoked dynamic and filament-evoked punctate mechanical allodynia. Potassium channel 2.1 (Kir2.1), which exhibits strong inward rectification, is and regulates the activity of lamina I projection neurons. However, the relationship between Kir2.1 channels and mechanical allodynia is still unclear. In this study, we first found that pretreatment with ML133, a selective Kir2.1 inhibitor, by intrathecal administration, preferentially inhibited dynamic, but not punctate, allodynia in mice with spared nerve injury (SNI). Intrathecal injection of low doses of strychnine, a glycine receptor inhibitor, selectively induced dynamic, but not punctate allodynia, not only in naïve but also in ML133-pretreated mice. In contrast, bicuculline, a GABA receptor antagonist, induced only punctate, but not dynamic, allodynia. These results indicated the involvement of glycinergic transmission in the development of dynamic allodynia. We further found that SNI significantly suppressed the frequency, but not the amplitude, of the glycinergic spontaneous inhibitory postsynaptic currents (gly-sIPSCs) in neurons on the lamina II-III border of the spinal dorsal horn, and pretreatment with ML133 prevented the SNI-induced gly-sIPSC reduction. Furthermore, 5 days after SNI, ML133, either by intrathecal administration or acute bath perfusion, and strychnine sensitively reversed the SNI-induced dynamic, but not punctate, allodynia and the gly-sIPSC reduction in lamina IIi neurons, respectively. In conclusion, our results suggest that blockade of Kir2.1 channels in the spinal dorsal horn selectively inhibits dynamic, but not punctate, mechanical allodynia by enhancing glycinergic inhibitory transmission.
Animals
;
Bicuculline
;
pharmacology
;
Disease Models, Animal
;
Glycine
;
metabolism
;
Hyperalgesia
;
drug therapy
;
etiology
;
metabolism
;
Imidazoles
;
pharmacology
;
Inhibitory Postsynaptic Potentials
;
drug effects
;
physiology
;
Male
;
Mice, Inbred C57BL
;
Neurons
;
drug effects
;
metabolism
;
Neurotransmitter Agents
;
pharmacology
;
Peripheral Nerve Injuries
;
drug therapy
;
metabolism
;
Phenanthrolines
;
pharmacology
;
Potassium Channels, Inwardly Rectifying
;
antagonists & inhibitors
;
metabolism
;
Receptors, GABA-A
;
metabolism
;
Receptors, Glycine
;
metabolism
;
Strychnine
;
pharmacology
;
Synaptic Transmission
;
drug effects
;
physiology
;
Tissue Culture Techniques
;
Touch
6.Clinical Manifestations, Gene Analysis of Patients with 3-Methylcrotonyl-CoA Carboxylase Deficiency.
HanByul LEE ; Bomi LEE ; So Yoon JUNG ; Jeongho LEE ; Yong Hee HONG ; Dong Hwan LEE
Soonchunhyang Medical Science 2018;24(1):55-58
OBJECTIVE: 3-Methylcrotonyl CoA carboxylase deficiency (3MCCD) is classified as organic acid disease due to leucine catabolism. It is among the most common inborn errors of metabolism identified on newborn screening test using tandem mass spectrometry. There is a broad spectrum of clinical presentations. 3-Methylcrotonyl CoA carboxylase converts 3-methylcrotonyl-CoA to 3-methylglutaconyl-CoA using biotin as a coenzyme in mitochondria. Restricting protein diets and supplementing carnitine, glycine, and biotin are known treatments. We reported this study to find out clinical symptoms, type of gene mutation, and effect of treatment. METHODS: This study was based on retrospective data of patients with 3MCCD in Soonchunhyang University Seoul Hospital and Soonchunhyang University Bucheon Hospital between April 2009 to August 2016. RESULTS: All 10 infants were born term infants and had no symptoms. During the neonatal period, abnormalities were detected in the new born screening test using tandem mass spectrometry, 3-hydroxyisovalerylcarnitine was increased. 3-Methylcrotonylglycine (3MCG) and 3-hydroxyisovalreric acid (3HIVA) were examined in urine organic acid assay. The results showed that 3MCG was increased in all 10 children. Except for three of the 10 children, 3HIVA was increased. Genetic tests were performed on all 10 children. MCCC1 gene mutations were detected in four patients and MCCC2 mutations were detected in six patients. After diagnosis, all children were recommended leucine-restricted diets, and seven of the 10 patients started to feed on leucine free formula for the treatment of 3MCCD. CONCLUSION: According to our data, all patients has no symptoms and are shown normal development. There were no clinical symptoms or changes in prognosis according to gene mutation type.
Biotin
;
Carnitine
;
Child
;
Diagnosis
;
Diet
;
Glycine
;
Gyeonggi-do
;
Humans
;
Infant
;
Infant, Newborn
;
Leucine
;
Mass Screening
;
Metabolism
;
Metabolism, Inborn Errors
;
Mitochondria
;
Neonatal Screening
;
Prognosis
;
Retrospective Studies
;
Seoul
;
Tandem Mass Spectrometry
7.Molecular characterization and efficacy evaluation of a transgenic corn event for insect resistance and glyphosate tolerance.
Miao-Miao LIU ; Xiao-Jing ZHANG ; Yan GAO ; Zhi-Cheng SHEN ; Chao-Yang LIN
Journal of Zhejiang University. Science. B 2018;19(8):610-619
A transgenic maize event ZD12-6 expressing a Bacillus thuringiensis (Bt) fusion protein Cry1Ab/Cry2Aj and a modified 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) protein G10 was characterized and evaluated. Southern blot analysis indicated that ZD12-6 is a single copy integration event. The insert site was determined to be at chromosome 1 by border sequence analysis. Expression analyses of Bt fusion protein Cry1Ab/Cry2Aj and the EPSPS protein G10 suggested that they are both expressed stably in different generations. Insect bioassays demonstrated that the transgenic plants are highly resistant to Asian corn borer (Ostrinia furnacalis), cotton boll worm (Helicoverpa armigera), and armyworm (Mythimna separata). This study suggested that ZD12-6 has the potential to be developed into a commercial transgenic line.
3-Phosphoshikimate 1-Carboxyvinyltransferase/metabolism*
;
Animals
;
Bacillus thuringiensis Toxins
;
Bacterial Proteins/metabolism*
;
China
;
Disease Resistance/genetics*
;
Drug Resistance/genetics*
;
Endotoxins/metabolism*
;
Gene Expression Profiling
;
Glycine/chemistry*
;
Hemolysin Proteins/metabolism*
;
Insecta
;
Plant Diseases/prevention & control*
;
Plants, Genetically Modified/genetics*
;
Zea mays/genetics*
;
Glyphosate
9.Analysis of MAT1A gene mutations in a child affected with simple hypermethioninemia.
Yun SUN ; Dingyuan MA ; Yanyun WANG ; Bin YANG ; Tao JIANG
Chinese Journal of Medical Genetics 2017;34(1):98-101
OBJECTIVETo detect potential mutations of MAT1A gene in a child suspected with simple hypermethioninemia by MS/MS neonatal screening.
METHODSClinical data of the child was collected. Genomic DNA was extracted by a standard method and subjected to targeted sequencing using an Ion AmpliseqInherited Disease Panel. Detected mutations were verified by Sanger sequencing.
RESULTSThe child showed no clinical features except evaluated methionine. A novel compound mutation of the MAT1A gene, i.e., c.345delA and c.529C>T, was identified in the child. His father and mother were found to be heterozygous for the c.345delA mutation and c.529C>T mutation, respectively.
CONCLUSIONThe compound mutation c.345delA and c.529C>T of the MAT1A gene probably underlie the disease in the child. The semi-conductor sequencing has provided an important means for the diagnosis of hereditary diseases.
Amino Acid Metabolism, Inborn Errors ; genetics ; pathology ; Base Sequence ; DNA Mutational Analysis ; methods ; Family Health ; Fathers ; Female ; Genetic Predisposition to Disease ; genetics ; Glycine N-Methyltransferase ; deficiency ; genetics ; Heterozygote ; Humans ; Infant, Newborn ; Infant, Newborn, Diseases ; genetics ; pathology ; Male ; Methionine Adenosyltransferase ; genetics ; Mothers ; Mutation
10.Dietary effect of green tea extract on hydration improvement and metabolism of free amino acid generation in epidermis of UV-irradiated hairless mice.
Sumin CHOI ; Jihye SHIN ; Bomin LEE ; Yunhi CHO
Journal of Nutrition and Health 2016;49(5):269-276
PURPOSE: Ultraviolet (UV) irradiation decreases epidermal hydration, which is maintained by reduction of natural moisturizing factors (NMFs). Among various NMFs, free amino acids (AA) are major constituents generated by filaggrin degradation. This experiment was conducted to determine whether or not dietary supplementation of green tea extract (GTE) in UV-irradiated mice can improve epidermal levels of hydration, filaggrin, free AAs, and peptidylarginine deiminase-3 (PAD3) expression (an enzyme involved in filaggrin degradation). METHODS: Hairless mice were fed a diet of 1% GTE for 10 weeks in parallel with UV irradiation (group UV+1%GTE). As controls, hairless mice were fed a control diet in parallel with (group UV+) or without (group UV-) UV irradiation. RESULTS: In group UV+, epidermal levels of hydration and filaggrin were lower than those in group UV-; these levels increased in group UV+1% GTE to levels similar to group UV-. Epidermal levels of PAD3 and major AAs of NMF, alanine, glycine and serine were similar in groups UV- and UV+, whereas these levels highly increased in group UV+1% GTE. CONCLUSION: Dietary GTE improves epidermal hydration by filaggrin generation and degradation into AAs.
Alanine
;
Amino Acids
;
Animals
;
Diet
;
Dietary Supplements
;
Epidermis*
;
Glycine
;
Metabolism*
;
Mice
;
Mice, Hairless*
;
Serine
;
Tea*

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