4.Genetic counseling for hearing loss today.
Journal of Clinical Otorhinolaryngology Head and Neck Surgery 2024;38(1):1-7
Genetic counseling for hearing loss today originated from decoding the genetic code of hereditary hearing loss, which serves as an effective strategy for preventing hearing loss and constitutes a crucial component of the diagnostic and therapeutic framework. This paper described the main principles and contents of genetic counseling for hearing loss, the key points of counseling across various genetic models and its application in tertiary prevention strategies targeting hearing impairment. The prospects of an AI-assisted genetic counseling decision system and the envisions of genetic counseling in preventing hereditary hearing loss were introduced. Genetic counseling for hearing loss today embodies the hallmark of a new era, which is inseparable from the advancements in science and technology, and will undoubtedly contribute to precise gene intervention!
Humans
;
Genetic Counseling
;
Deafness/genetics*
;
Hearing Loss/diagnosis*
;
Hearing Loss, Sensorineural/genetics*
5.Research progress on hereditary endocrine and metabolic diseases associated with sensorineural hearing loss.
Fang CHEN ; Qinying ZHANG ; Qiujing ZHANG ; Qiuju WANG
Journal of Clinical Otorhinolaryngology Head and Neck Surgery 2024;38(1):63-69
Hereditary endocrine and metabolic diseases , caused by genetic factors, exhibit complex and diverse symptoms, including the possibility of concurrent sensorineural deafness. Currently, there is a limited clinical understanding of hereditary endocrine and metabolic diseases that manifest with deafness, the pathogenesis remains unclear,and there is a lack of effective diagnostic and treatment methods. This article summarizes the research progress of hereditary endocrine and metabolic diseases complicated with deafness from the pathogenesis, clinical phenotype, diagnosis and treatment. Understanding the current research progress and integrating genetic analysis into clinical practice are crucial for accurate diagnosis and treatment, evaluating clinical efficacy, and providing effective genetic counseling for these diseases.
Humans
;
Deafness/genetics*
;
Hearing Loss, Sensorineural/diagnosis*
;
Phenotype
;
Metabolic Diseases/genetics*
;
Genetic Counseling
6.The analysis of gene screening results for common hereditary hearing loss in 2 102 pregnant women in Dali area.
Bowen WANG ; Fanyuan MA ; Chunjie TIAN
Journal of Clinical Otorhinolaryngology Head and Neck Surgery 2024;38(11):1061-1065
Objective:By conducting genetic testing of hereditary hearing loss in pregnant women within 17 weeks of gestation in Dali areas, the importance of genetic testing and genetic counseling during pregnancy was emphasized. Methods:Twenty-one mutation sites of 4 hearing loss genes, including GJB2, GJB3, SLC26A4 and mtDNA, were detected by PCR amplification technology. The positive ratio, mutation ratio and ethnic distribution of positive samples were statistically described. Results:The positive ratios of GJB2 and SLC26A4 genes were 1.24% and 1.43%, respectively, with mutation rates of 40.62% and 46.88% in the positive samples, respectively. The positive ratio of GJB3gene was 0.19%, and mtDNA mutation genes accounted for 0.14%, and all of them were mtDNA(Heterozygous). There was only one case of GJB2/SLC26A4 double positive multi-gene mutation, with a positive ratio of 0.05%. The frequency of GJB2 c. 235delC site was the highest, accounting for 65.38% of GJB2 mutation genes and 26.56% of mutation gene samples. Conclusion:GJB2 and SLC26A4 are the most common genes of hearing loss, and GJB2 c. 235delC site is the most common mutation site. Identifying the hearing loss mutation site is of great importance to prevent the birth of hereditary hearing loss children, and genetic diagnosis, genetic counseling, and appropriate intervention are crucial to alleviate congenital problems.
Humans
;
Female
;
Pregnancy
;
Sulfate Transporters/genetics*
;
Connexin 26
;
Genetic Testing/methods*
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Connexins/genetics*
;
Mutation
;
Hearing Loss/diagnosis*
;
DNA, Mitochondrial/genetics*
;
Adult
;
Membrane Transport Proteins/genetics*
;
Genetic Counseling
7.Analysis of clinical characteristics and genetic variants in a child with Isolated sulfite oxidase deficiency.
Zhigang YANG ; Yali QUAN ; Yuan WANG ; Guohong CHEN ; Yanli MA ; Kaili XU
Chinese Journal of Medical Genetics 2023;40(8):986-989
OBJECTIVE:
To explore the genetic basis for a child with Isolated sulfite oxidase deficiency (ISOD).
METHODS:
The child and her parents were subjected to targeted capture and next-generation sequencing. Pathogenicity of candidate variants was assessed based on the guidelines from the American College of Medical Genetics and Genomics (ACMG).
RESULTS:
The child was found to harbor compound heterozygous variants of the SUOX gene, namely c.1200C>G (p.Tyr400*) and c.1406_1421delCCTGGCAGGTGGCTAA (p.Thr469Serfs*20), which were inherited from her mother and father, respectively. The c.1200C>G was a known pathogenic variant, while the c.1406_1421delCCTGGCAGGTGGCTAA was unreported previously and predicted to be a pathogenic variant (PVS1+PM2_Supporting +PM3) based on the guidelines from the American College of Medical Genetics and Genomics.
CONCLUSION
The compound c.1200C>G and c.1406_1421delCCTGGCAGGTGGCTAA variants of the SUOX gene probably underlay the pathogenesis of ISOD in this child. Above finding has expanded the spectrum of SUOX gene variants and provided molecular evidence for the clinical diagnosis and genetic counseling for this pedigree.
Child
;
Female
;
Humans
;
Amino Acid Metabolism, Inborn Errors/genetics*
;
Genetic Counseling
;
Genomics
;
High-Throughput Nucleotide Sequencing
;
Mutation
8.Analysis of ARX gene variant in a child with X-linked lissencephaly with abnormal genitalia.
Jiajia GUO ; Yuan TIAN ; Huijuan WANG ; Jinguang WANG ; Xufang FAN ; Falin XU ; Lihong SHANG ; Xiaoli ZHANG
Chinese Journal of Medical Genetics 2023;40(9):1134-1139
OBJECTIVE:
To explore the clinical characteristics and genetic basis for a child with X-linked lissencephaly with abnormal genitalia (XLAG).
METHODS:
A child with XLAG who had presented at the Third Affiliated Hospital of Zhengzhou University in May 2021 was selected as the study subject. Peripheral blood samples of the child and his parents were collected and subjected to high-throughput sequencing. Based on the guidelines from the American College of Medical Genetics and Genomics (ACMG), the result was analyzed by using bioinformatic software.
RESULTS:
The child was found to have harbored a hemizygous c.945_948del variant in exon 2 of the ARX gene, which as a frameshifting variant has resulted in a truncated protein. His mother was found to be heterozygous for the variant, whilst his father was of wild type. The variant was unreported previously.
CONCLUSION
The hemizygous c.945_948del variant of the ARX gene probably underlay the XLAG in this patient. Above finding has provided a basis for the diagnosis and genetic counseling for this family.
Humans
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Child
;
Classical Lissencephalies and Subcortical Band Heterotopias
;
Exons
;
Computational Biology
;
Genetic Counseling
;
Genitalia
;
Transcription Factors
;
Homeodomain Proteins
9.Analysis of PKP2 gene variants in a child with Arrhythmogenic right ventricular cardiomyopathy.
Juan HUANG ; Xiaofeng GUO ; Wei JI
Chinese Journal of Medical Genetics 2023;40(9):1165-1170
OBJECTIVE:
To explore the clinical and genetic characteristics of a child with Arrhythmogenic right ventricular cardiomyopathy (ARVC).
METHODS:
A 6-year-old boy with ARVC who had visited Fujian Provincial Children's Hospital on August 23, 2022 was selected as the study subject. Relevant clinical data were collected, and peripheral venous blood samples were collected from the child and his parents for genetic testing through whole exome sequencing (WES). Sanger sequencing was carried out for family verification, and pathogenicity analysis was conducted for the candidate variants.
RESULTS:
The child had exhibited clinical symptoms including systemic edema, generalized heart enlargement, universal reduction of interventricular septum and ventricular wall movement, reduced left ventricular diastolic and systolic function, and reduced right ventricular systolic function. WES revealed that the child has harbored compound heterozygous variants of the PKP2 gene, namely c.119_122del (p.Leu40ArgfsTer71) and c.1978G>A (p.Gly660Arg), which were verified by Sanger sequencing to be respectively inherited from his father and mother. The c.119_122del variant has not been recorded in the 1000 Genomes, gnomAD and ExAC databases, and was predicted to lead to truncation of the PKP2 protein by SWISS-MODEL and PyMOL online software and classified as likely pathogenic based on the guidelines jointly developed by the American College of Medical Genetics and Genomics (ACMG) and ClinGen. The c.1978G>A variant has also not been recorded in the 1000 Genomes, gnomAD and ExAC databases, and was predicted to be deleterious by online software including REVEL, SIFT, CADD, Mutation Taster, and PolyPhen-2. The amino acid encoded by the variant site was highly conserved among various species by analysis using T-coffee and ESPript v3.0 online servers. The variant may affect the protein function by SWISS-MODEL and PyMOL online server analysis, and was classified as likely pathogenic based on the guidelines jointly developed by the ACMG and ClinGen.
CONCLUSION
The compound heterozygous variants of c.119_122del (p.Leu40ArgfsTer71) and c.1978G>A (p.Gly660Arg) of the PKP2 gene probably underlay the ARVC in this child. Above finding has broadened the spectrum of PKP2 gene variants and provided a reference for the diagnosis and genetic counseling.
Male
;
Child
;
Humans
;
Arrhythmogenic Right Ventricular Dysplasia/genetics*
;
Diastole
;
Ethnicity
;
Genetic Counseling
;
Genetic Testing
;
Plakophilins/genetics*
10.Clinical and genetic analysis of eight children with Primary hypertrophic cardiomyopathy.
Qiqing SUN ; Fangjie WANG ; Linbo SU ; Kun HE ; Yingying LI ; Chanjuan HAO ; Wei LI ; Jun GUO
Chinese Journal of Medical Genetics 2023;40(10):1211-1216
OBJECTIVE:
To explore the clinical and genetic characteristics of eight children with Primary hypertrophic cardiomyopathy (HCM).
METHODS:
Eight children with HCM admitted to the Department of Cardiology of Henan Children's Hospital from January 2018 to December 2021 were selected as the study subjects. Clinical data of the children were collected. Whole exome sequencing was carried out on two children, and trio whole exome sequencing was carried out on the remainder 6 children. Sanger sequencing was used to verify the candidate variants in the children and their parents, and the pathogenicity of the variants was evaluated based on the guidelines from the American College of Medical Genetics and Genomics (ACMG).
RESULTS:
The patients had included 5 males and 3 females, with their ages ranging from 5 to 13 years old. The average age of diagnosis was (7.87 ± 4.8) years old, and the cardiac phenotype showed non-obstructive HCM in all of the patients. WES has identified variants of the MYH7 gene in 4 children, including c.2155C>T (p.Arg719Trp), c.1208G>A (p.Arg403Gln), c.1358G>A (p.Arg453His), and c.1498G>A (p.Glu500Lys). Based on the guidelines from the ACMG, the first 3 variants were classified as pathogenic, while c.1498G>A (p.Glu500Lys) was classified as likely pathogenic (PM1+PM2_Supporting+PM6+PP3), which was also unreported previously. The remaining four children had all harbored maternal variants, including MYL2: c.173G>A (p.Arg58Gln; classified as pathogenic), TPM1: c.574G>A (p.Glu192Lys) and ACTC1: c.301G>A (p.Glu101Lys)(both were classified as likely pathogenic), and MYBPC3: c.146T>G (p.Ile49Ser; classified as variant of uncertain significance). Seven children were treated with 0.5 ~ 3 mg/(kg·d) propranolol, and their symptoms had improved significantly. They were followed up until September 30, 2022 without further cardiac event.
CONCLUSION
Genetic testing can clarify the molecular basis for unexplained cardiomyopathy and provide a basis for clinical diagnosis and genetic counseling. Discovery of the c.1498G>A (p.Glu500Lys) variant has also expanded the spectrum of MYH7 gene mutations underlying HCM.
Female
;
Male
;
Humans
;
Child
;
Child, Preschool
;
Adolescent
;
Cytoskeletal Proteins
;
Family
;
Genetic Counseling
;
Genetic Testing
;
Cardiomyopathy, Hypertrophic/genetics*


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