1.Identification of a novel variant of F5 gene in a consanguineous pedigree affected with inherited coagulation factor V deficiency.
Mohan LIU ; Yuan YANG ; Yunqiang LIU
Chinese Journal of Medical Genetics 2020;37(5):505-508
OBJECTIVE:
To explore the genetic basis for a consanguineous pedigree affected with inherited coagulation factor V deficiency.
METHODS:
Genomic DNA was extracted from peripheral blood samples from the pedigree and subjected to next generation sequencing for screening variants of the F5 gene. Suspected pathogenic variant was verified by using Sanger sequencing. Pathogenicity of the variant was evaluated according to ACMG guidelines.
RESULTS:
A homozygous frameshifting variant, c.4096delC (p.Leu1366Phefs*3), was identified in the F5 gene in the proband, which was confirmed to be derived from her consanguineous parents. This variant was absent in all databases including 10 000 in-house Chinese exome sequences. Based on the ACMG guidelines, the c.4096delC was predicted to be a pathogenic variant.
CONCLUSION
A novel pathogenic variant has been identified in the F5 gene in a consanguineous pedigree with inherited coagulation factor V deficiency, which has enriched the spectrum of F5 gene variants.
Consanguinity
;
Factor V
;
genetics
;
Factor V Deficiency
;
genetics
;
Female
;
Genetic Variation
;
Humans
;
Pedigree
2.Clinical phenotype and variantal analysis of a pedigree affected with hereditary coagulation factor V deficiency.
Fengyu CHE ; Wendi HUANG ; Ying YANG ; Guoxia WANG ; Liyu ZHANG ; Ruobing LIANG ; Jiangang ZHAO
Chinese Journal of Medical Genetics 2020;37(4):427-430
OBJECTIVE:
To explore the molecular basis for a pedigree affected with coagulation factor V (FV) deficiency.
METHODS:
Clinical data of the patient and his family members was analyzed. Targeted capture and next-generation sequencing (NGS) and Sanger sequencing were carried out to detect potential variant of the FV gene.
RESULTS:
The patient presented with jaundice and prolonged prothrombin time (PT) and activated partial thromboplastic time (APTT). V factor activity measured only 0.1% of the normal level, though the patient had no sign of bleeding. A paternal heterozygous variant c.653T>C (p.F218S) and a maternal heterozygous variant c.3642_3643del (p.P1215Rfs*175) were identified in the FV gene of the patient. His elder brother was a heterozygous carrier of the c.653T>C (p.F218S) variant. c.653T>C(p.F218S) was a known pathogenic variant, while the c.3642_3643del (p.P1215Rfs*175) variant was unreported previously.
CONCLUSION
Mutations of the FV gene probably underlie the hereditary coagulation factor V deficiency in this patient. NGS combined with Sanger sequencing has detected potential variant with efficiency and provided a reliable basis for clinical and prenatal diagnosis for this family.
Aged
;
Factor V
;
Factor V Deficiency
;
genetics
;
Genetic Variation
;
Heterozygote
;
Humans
;
Male
;
Mutation
;
Pedigree
;
Phenotype
3.Phenotypic and mutational analysis of a pedigree affected with hereditary coagulation factor Ⅴ deficiency.
Mengcha TIAN ; Hong XIA ; Zhishan ZHANG ; Yanhui JIN ; Kankan SU ; Mingshan WANG
Chinese Journal of Medical Genetics 2018;35(2):202-206
OBJECTIVETo explore the molecular pathogenesis for a pedigree affected with coagulation factor Ⅴ (FⅤ) deficiency.
METHODSProthrombin time (PT), activated partial thromboplastin time (APTT), fibrinogen (FIB), coagulation factor Ⅱ activity (FⅡ: C), FⅤ activity (FⅤ: C), coagulation factor Ⅶ activity (FⅦ: C), and coagulation factor Ⅹ activity (FⅩ: C) were determined with a STAGO automatic coagulometer. FⅤ antigen (FⅤ: Ag) was detected with enzyme linked immunosorbent assay (ELISA). All exons and their flanking regions, and 5' and 3' untranslated regions of the F5 gene were analyzed by direct sequencing. Suspected mutation was verified by reverse sequencing as well as testing of family members. ClustalX software was used to analyze the conservative property of the mutation sites. PROVEAN and MutationTaster online software was used to predict the effect of the mutation on the protein function. Swiss-pdbViewer was used to analyze the protein model and interaction of amino acids.
RESULTSThe PT and APTT of the proband were slightly prolonged to 15.2 s and 41.8 s, respectively. And the FⅤ: C and FⅤ: Ag measured 55% and 62%, respectively. The FⅤ: C and FⅤ: Ag of his father and son were decreased to various extent (60%, 65% and 31%, 40%, respectively). A c.911G>A heterozygous mutation (Gly276Glu) was detected in exon 6 of the proband, for which her father and son were heterozygotes. The same mutation was not found in her mother, brother and husband. Conservation analysis showed that the Gly276 is highly conserved across various species. By bioinformatic analysis, the PROVEAN (scored -6.214) indicated Gly276Glu was harmful, and MutationTaster (scored 0.976) suggested that it is pathogenic. Model analysis suggested there are two hydrogen bonds between Gly276 and Ile298 in the wild type protein. When Gly276 was replaced by Glu276, the original hydrogen bond did not change, but the side chain of Glu was extended, which added steric hindrance with the surrounding amino acids, which resulted in decreased protein stability.
CONCLUSIONThe heterozygous c.911G>A (Gly276Glu) mutation of the F5 gene probably underlies the decreased level of FⅤin the proband.
Adult ; Computational Biology ; Factor V ; chemistry ; genetics ; Factor V Deficiency ; genetics ; Female ; Humans ; Male ; Middle Aged ; Mutation ; Pedigree ; Phenotype
4.A Case of Acquired Factor V Deficiency after Percutaneous Coronary Intervention.
Eun Sang YU ; Dae Sik KIM ; Chul Won CHOI
Korean Journal of Medicine 2017;92(5):480-483
Acquired factor V deficiency is extremely rare. Here we report the case of an 88-year-old female patient who presented with hematochezia 1 month after undergoing percutaneous coronary intervention. Her laboratory results showed an extremely prolonged prothrombin time and an activated partial thromboplastin time, but neither improved after fresh frozen plasma transfusion. She was finally diagnosed with acquired factor V deficiency and successfully treated with an immunosuppressant.
Aged, 80 and over
;
Blood Coagulation Factor Inhibitors
;
Factor V Deficiency*
;
Factor V*
;
Female
;
Gastrointestinal Hemorrhage
;
Humans
;
Partial Thromboplastin Time
;
Percutaneous Coronary Intervention*
;
Plasma
;
Prothrombin Time
5.Thrombophilia in Korean patients with arterial or venous thromboembolisms.
Sungbae KIM ; Incheol SONG ; Hyung Kee KIM ; Seung HUH
Annals of Surgical Treatment and Research 2016;90(6):340-345
PURPOSE: To determine the prevalence of thrombophilia in Korean patients with an arterial thromboembolism (ATE) or a venous thromboembolism (VTE), and to evaluate the characteristic of VTE in patients with thrombophilia. METHODS: Hospital records of 294 patients (228 with VTE, 66 with ATE) including two foreign ones (mean age, 51.4 years) who underwent thrombophilia testing between August 2006 and March 2015 were reviewed retrospectively. In general, such screening was performed according to the guidelines of the international consensus statement for VTE. Thrombophilia testing included evaluations of the factor V Leiden and prothrombin G20210A mutations, levels of proteins C and S and antithrombin, and antiphospholipid antibody syndrome (APLS). RESULTS: A factor V Leiden mutation was not found in the 292 Korean patients. A prothrombin G21210A mutation was investigated in 33 patients but none was found. Among 226 Korean patients with VTE, 130 demonstrated no thrombophilia and 55 patients did after exclusion of 41 patients without confirmatory test. The most common form was protein S deficiency (31 of 55, 56%) followed by protein C deficiency, antithrombin deficiency, and APLS. When comparing patients with a VTE or deep vein thrombosis (DVT) according to the presence of thrombophilia, thrombophilia was associated with younger age (P = 0.001 for VTE; P < 0.001 for DVT) and a family history (P < 0.001 for VTE and DVT). CONCLUSION: We did not find any factor V Leiden mutation in Korean subjects at high risk for thrombophilia. Therefore, this testing is not warranted. Thrombophilia was associated with VTE in younger age and a family history.
Antiphospholipid Syndrome
;
Consensus
;
Factor V
;
Hospital Records
;
Humans
;
Korea
;
Mass Screening
;
Prevalence
;
Protein C Deficiency
;
Protein S Deficiency
;
Prothrombin
;
Retrospective Studies
;
Thromboembolism*
;
Thrombophilia*
;
Venous Thromboembolism
;
Venous Thrombosis
6.Genetic Confirmation of Congenital Factor V Deficiency in Korean Patients.
Chang Hun PARK ; Kiyoung YOO ; Ki O LEE ; Sun Hee KIM ; Ki Woong SUNG ; Hee Jin KIM
Annals of Laboratory Medicine 2016;36(2):182-184
No abstract available.
Adolescent
;
Asian Continental Ancestry Group/*genetics
;
Base Sequence
;
DNA Mutational Analysis
;
Factor V/genetics
;
Factor V Deficiency/congenital/*diagnosis
;
Female
;
Heterozygote
;
Humans
;
Middle Aged
;
Mutation, Missense
;
Partial Thromboplastin Time
;
Republic of Korea
7.Factor V Deficiency in Korean Patients: Clinical and Laboratory Features, Treatment, and Outcome.
Young Hoon PARK ; Joo Han LIM ; Hyeon Gyu YI ; Moon Hee LEE ; Chul Soo KIM
Journal of Korean Medical Science 2016;31(2):208-213
Due to rarity of factor V (FV) deficiency, there have been only a few case reports in Korea. We retrospectively analysed the clinical-laboratory features of FV deficiency in 10 Korean patients. Between January 1987 and December 2013, 10 case reports published in a Korean journal or proceedings of Korea Society on Thrombosis and Hemostasis were reviewed. Severity is defined as mild (> 5% of factor activity), moderate (1%-5%), and severe (< 1%). The median age at diagnosis, six males and four females, was 26 years (range, 1 month-73 years). Six of 10 patients were classified as moderate, three as mild, and one as severe disease. Eight patients were diagnosed as inherited FV deficiency. The most frequent symptoms were mucosal tract bleedings (40%) such as epistaxis, and menorrhagia in female. Hemarthroses and postoperative bleeding occurred in one and four patients, respectively. Life-threatening bleeding episodes occurred in the peritoneal cavity (n = 2), central nerve system (n = 1), and retroperitoneal space (n = 1). No lethal haemorrhages happened to patients with mild disease. The majority of bleeding episodes were controlled with local measures and fresh-frozen plasma replacement. Two acquired FV deficient-patients showing life-threatening haemorrhages received the immunosuppressive therapy, but one of them died from postoperative bleeding complications. Despite the small sample size of this study due to rarity of the disease, we found that Korean patients with FV deficiency had similar clinical manifestations and treatment outcomes shown in previous studies.
Adolescent
;
Adult
;
Aged
;
Asian Continental Ancestry Group
;
Blood Transfusion
;
Child
;
Databases, Factual
;
Factor V Deficiency/drug therapy/*pathology
;
Female
;
Hemorrhage/etiology
;
Humans
;
Immunoglobulins, Intravenous/therapeutic use
;
Immunosuppressive Agents/therapeutic use
;
Infant
;
Male
;
Middle Aged
;
Plasma
;
Republic of Korea
;
Retrospective Studies
;
Severity of Illness Index
;
Treatment Outcome
;
Young Adult
8.Factor V Deficiency in Korean Patients: Clinical and Laboratory Features, Treatment, and Outcome.
Young Hoon PARK ; Joo Han LIM ; Hyeon Gyu YI ; Moon Hee LEE ; Chul Soo KIM
Journal of Korean Medical Science 2016;31(2):208-213
Due to rarity of factor V (FV) deficiency, there have been only a few case reports in Korea. We retrospectively analysed the clinical-laboratory features of FV deficiency in 10 Korean patients. Between January 1987 and December 2013, 10 case reports published in a Korean journal or proceedings of Korea Society on Thrombosis and Hemostasis were reviewed. Severity is defined as mild (> 5% of factor activity), moderate (1%-5%), and severe (< 1%). The median age at diagnosis, six males and four females, was 26 years (range, 1 month-73 years). Six of 10 patients were classified as moderate, three as mild, and one as severe disease. Eight patients were diagnosed as inherited FV deficiency. The most frequent symptoms were mucosal tract bleedings (40%) such as epistaxis, and menorrhagia in female. Hemarthroses and postoperative bleeding occurred in one and four patients, respectively. Life-threatening bleeding episodes occurred in the peritoneal cavity (n = 2), central nerve system (n = 1), and retroperitoneal space (n = 1). No lethal haemorrhages happened to patients with mild disease. The majority of bleeding episodes were controlled with local measures and fresh-frozen plasma replacement. Two acquired FV deficient-patients showing life-threatening haemorrhages received the immunosuppressive therapy, but one of them died from postoperative bleeding complications. Despite the small sample size of this study due to rarity of the disease, we found that Korean patients with FV deficiency had similar clinical manifestations and treatment outcomes shown in previous studies.
Adolescent
;
Adult
;
Aged
;
Asian Continental Ancestry Group
;
Blood Transfusion
;
Child
;
Databases, Factual
;
Factor V Deficiency/drug therapy/*pathology
;
Female
;
Hemorrhage/etiology
;
Humans
;
Immunoglobulins, Intravenous/therapeutic use
;
Immunosuppressive Agents/therapeutic use
;
Infant
;
Male
;
Middle Aged
;
Plasma
;
Republic of Korea
;
Retrospective Studies
;
Severity of Illness Index
;
Treatment Outcome
;
Young Adult
9.Antibiotic-Induced Acquired Factor V Inhibitor.
Doo Ho LIM ; Tae Oh KIM ; Yumun JEONG ; Won Jang KIM ; Seung Jung PARK ; Je Hwan LEE ; Sung Soo JANG
Korean Journal of Medicine 2014;87(1):105-109
Acquired factor V inhibitor is a rare condition with a variety of clinical manifestations that range from no bleeding symptoms to life-threatening hemorrhage or thromboembolic events. Treatment is determined by the clinical course and focuses on controlling the hemorrhagic event and decreasing the antibody titer if bleeding symptoms are present. We report herein a case involving a 70-year-old man who developed acquired factor V inhibitor after antibiotic administration (11-day course of ceftriaxone and successive 5-day course of piperacillin-tazobactam) for pneumonia. His condition was characterized by elevated prothrombin and activated partial thromboplastin times without bleeding events. Coagulation factor assays revealed undetectable factor V activity and a factor V inhibitor level of 3.29 Bethesda units. After cessation of the antibiotics, both the prothrombin and activated partial thromboplastin times gradually normalized.
Aged
;
Anti-Bacterial Agents
;
Blood Coagulation Factors
;
Ceftriaxone
;
Factor V Deficiency
;
Factor V*
;
Hemorrhage
;
Humans
;
Pneumonia
;
Prothrombin
;
Thromboplastin
10.Analysis of a consanguineous pedigree featuring hereditary coagulation factor Ⅴ deficiency.
Yao-sheng XIE ; Yang ZHANG ; Li-qing ZHU ; Yan-hui JIN ; Li-hong YANG ; Hai-xiao XIE ; Ming-shan WANG ; Xiao-li YANG
Chinese Journal of Medical Genetics 2013;30(2):161-164
OBJECTIVETo screen potential mutation and explore the underlying mechanism for a consanguineous pedigree featuring hereditary coagulation factor Ⅴ (FⅤ) deficiency.
METHODSClinical diagnosis was validated by coagulant parameter assays of prothrombin time (PT), activated partial thromboplastin time (APTT), fibrinogen (FIB), FⅤ procoagulant activity (FⅤ:C) and FⅤ antigen (FⅤ:Ag). Potential mutations of the F5 gene in the proband and his family members were analyzed by direct DNA sequencing of PCR products of all exons, exon-intron boundaries and 3', 5' untranslated regions. Suspected mutation was confirmed by reverse sequencing.
RESULTSThe PT and APTT in the proband were significantly prolonged, which measured 23.5 s (reference range 11.8-14.8 s) and 50.5 s (reference range 27.0-41.0 s), respectively. FⅤ activity and FⅤ antigen of the proband were significantly reduced to 8% and <1%, respectively. PT and APTT in the younger sister of the proband were also significantly prolonged (24.1 s and 62.4 s, respectively). Her FⅤ activity and FⅤ antigen were also significantly decreased (7% and <1%, respectively). PT and APTT of other family members were within the normal range. The homozygous missence mutation causing T→C transition at position 29170 in exon 5 of F5 gene has resulted in a Phe190Ser substitution in the proband. His younger sister was also homozygous for Phe190Ser. Heterozygosity for Phe190Ser was confirmed in his elder brother, elder sister, two daughters and niece, and their FⅤ activity were slightly decreased (57%, 73%, 72%, 66% and 75%, respectively). A normal wild type was observed in two younger brothers of the proband, and their FⅤ activity and FⅤ antigen were in the normal range.
CONCLUSIONHomozygous missence mutation of Phe190Ser has been found in above family featuring hereditary FⅤ deficiency. The homozygous missence mutation was inherited from the parents by consanguineous marriage. Phe190Ser probably underlies may underlie the pathogenesis of hereditary FⅤ deficiency in this pedigree.
Adult ; Consanguinity ; Factor V ; genetics ; Factor V Deficiency ; blood ; genetics ; Female ; Humans ; Male ; Middle Aged ; Mutation, Missense ; Partial Thromboplastin Time ; Pedigree ; Prothrombin Time ; Sequence Analysis, DNA

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