1.Dembo polymerase chain reaction technique for detection of bovine abortion, diarrhea, and respiratory disease complex infectious agents in potential vectors and reservoirs
Sayed Samim RAHPAYA ; Shinobu TSUCHIAKA ; Mai KISHIMOTO ; Mami OBA ; Yukie KATAYAMA ; Yuka NUNOMURA ; Saki KOKAWA ; Takashi KIMURA ; Atsushi KOBAYASHI ; Yumi KIRINO ; Tamaki OKABAYASHI ; Nariaki NONAKA ; Hirohisa MEKATA ; Hiroshi AOKI ; Mai SHIOKAWA ; Moeko UMETSU ; Tatsushi MORITA ; Ayako HASEBE ; Keiko OTSU ; Tetsuo ASAI ; Tomohiro YAMAGUCHI ; Shinji MAKINO ; Yoshiteru MURATA ; Ahmad Jan ABI ; Tsutomu OMATSU ; Tetsuya MIZUTANI
Journal of Veterinary Science 2018;19(3):350-357
Bovine abortion, diarrhea, and respiratory disease complexes, caused by infectious agents, result in high and significant economic losses for the cattle industry. These pathogens are likely transmitted by various vectors and reservoirs including insects, birds, and rodents. However, experimental data supporting this possibility are scarce. We collected 117 samples and screened them for 44 bovine abortive, diarrheal, and respiratory disease complex pathogens by using Dembo polymerase chain reaction (PCR), which is based on TaqMan real-time PCR. Fifty-seven samples were positive for at least one pathogen, including bovine viral diarrhea virus, bovine enterovirus, Salmonella enterica ser. Dublin, Salmonella enterica ser. Typhimurium, and Neospora caninum; some samples were positive for multiple pathogens. Bovine viral diarrhea virus and bovine enterovirus were the most frequently detected pathogens, especially in flies, suggesting an important role of flies in the transmission of these viruses. Additionally, we detected the N. caninum genome from a cockroach sample for the first time. Our data suggest that insects (particularly flies), birds, and rodents are potential vectors and reservoirs of abortion, diarrhea, and respiratory infectious agents, and that they may transmit more than one pathogen at the same time.
Animals
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Birds
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Cattle
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Cockroaches
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Diarrhea Viruses, Bovine Viral
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Diarrhea
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Diptera
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Disease Reservoirs
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Disease Vectors
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Enterovirus
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Enterovirus, Bovine
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Genome
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Insects
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Neospora
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Polymerase Chain Reaction
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Real-Time Polymerase Chain Reaction
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Rodentia
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Salmonella enterica
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Virulence Factors
2.Emerging New Phylogenetic Groups of Rabies Virus in Chinese Ferret Badgers.
Fa Ming MIAO ; Teng CHEN ; Ye LIU ; Shou Feng ZHANG ; Fei ZHANG ; Nan LI ; Rong Liang HU
Biomedical and Environmental Sciences 2018;31(6):479-482
Chinese ferret badger (FB)-transmitted rabies is a serious threat to public health in southeast China. Although mostly associated with dogs, the rabies virus (RABV) presents genetic diversity and has a significantly wide host range in China. Instead of the dog- and wildlife-associated China II lineage in the past decades, the China I lineage has become the main epidemic group hosted and transmitted by dogs. In this study, four new lineages, including 43 RABVs from FBs, have been classified within the dog-dominated China I lineage since 2014. FB RABVs have been previously categorized in the China II lineage. Moreover, FB-hosted viruses seem to have become the main independent FB-associated clade in the phylogenetic tree. This claim suggests that the increasing genetic diversity of RABVs in FBs is a result of the selective pressure from coexisting dog rabies. FB transmission has become complicated and serious with the coexistence of dog rabies. Therefore, apart from targeting FB rabies, priority should be provided by the appropriate state agencies to perform mass immunization of dog against rabies.
Animals
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Brain
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virology
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China
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epidemiology
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Disease Reservoirs
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veterinary
;
virology
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Dog Diseases
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epidemiology
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transmission
;
virology
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Dogs
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Ferrets
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virology
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Genetic Linkage
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Genetic Variation
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Phylogeny
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Phylogeography
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Rabies
;
epidemiology
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transmission
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veterinary
;
virology
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Rabies virus
;
genetics
3.Prevalence of Anaplasma and Bartonella spp. in Ticks Collected from Korean Water Deer (Hydropotes inermis argyropus).
Jun Gu KANG ; Sungjin KO ; Heung Chul KIM ; Sung Tae CHONG ; Terry A KLEIN ; Jeong Byoung CHAE ; Yong Sun JO ; Kyoung Seong CHOI ; Do Hyeon YU ; Bae Keun PARK ; Jinho PARK ; Joon Seok CHAE
The Korean Journal of Parasitology 2016;54(1):87-91
Deer serve as reservoirs of tick-borne pathogens that impact on medical and veterinary health worldwide. In the Republic of Korea, the population of Korean water deer (KWD, Hydropotes inermis argyropus) has greatly increased from 1982 to 2011, in part, as a result of reforestation programs established following the Korean War when much of the land was barren of trees. Eighty seven Haemaphysalis flava, 228 Haemaphysalis longicornis, 8 Ixodes nipponensis, and 40 Ixodes persulcatus (21 larvae, 114 nymphs, and 228 adults) were collected from 27 out of 70 KWD. A total of 89/363 ticks (266 pools, 24.5% minimum infection rate) and 5 (1.4%) fed ticks were positive for Anaplasma phagocytophilum using nested PCR targeting the 16S rRNA and groEL genes, respectively. The 16S rRNA gene fragment sequences of 88/89 (98.9%) of positive samples for A. phagocytophilum corresponded to previously described gene sequences from KWD spleen tissues. The 16S rRNA gene fragment sequences of 20/363 (5.5%) of the ticks were positive for A. bovis and were identical to previously reported sequences. Using the ITS specific nested PCR, 11/363 (3.0%) of the ticks were positive for Bartonella spp. This is the first report of Anaplasma and Bartonella spp. detected in ticks collected from KWD, suggesting that ticks are vectors of Anaplasma and Bartonella spp. between reservoir hosts in natural surroundings.
Anaplasma/genetics/*physiology
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Animals
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Arachnid Vectors/microbiology
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Bartonella/genetics/*physiology
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Chaperonin 60/genetics
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Deer/parasitology
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Disease Reservoirs/veterinary
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RNA, Ribosomal, 16S/genetics
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Republic of Korea/epidemiology
;
Ticks/*microbiology
4.Distribution Characteristics of Spermophilus dauricus in Manchuria City in China in 2015 through '3S' Technology.
Long Xing FAN ; En Qi WU ; Jun LIU ; Xiao Chen QU ; Chao LIU ; Bao An NING ; Ying LIU
Biomedical and Environmental Sciences 2016;29(8):603-608
Plague is a virulent infectious disease in China. In this study, '3S' technology was used to perform spatial autocorrelation analysis and spatial interpolation analysis for Spermophilus dauricus (S. Dauricus, a species of ground squirrel) captured in Manchuria City in 2015. The results were visually inspected. During the two-month (May to July) plague surveillance in 2015, 198 S. dauricus individuals were captured in the study area in Manchuria City (48 monitoring areas) by using a day-by-day catching method. Spatial autocorrelation was conducted using the ArcGIS software, and the following significantly different results were obtained: Moran's I=0.228472, Z-score=2.889126, and P<0.05. Thus, a spatial aggregation was observed. In 2015, the distribution of S. dauricus diminished from west to east and from north to south of Manchuria. Geo Detector software was used to analyze the habitat factors affecting the spatial distribution of S. dauricus. This highly clustered species mainly exists in suburban communities, construction sites, and areas surrounding factories. In future studies, plague surveillances should be performed in areas around Manchuria and Zhalainuoer.
Animal Distribution
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Animals
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China
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Disease Reservoirs
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statistics & numerical data
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Geographic Information Systems
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Humans
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Plague
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transmission
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Sciuridae
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physiology
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Spatial Analysis
5.Dynamics of Rodent and Rodent-borne Disease during Construction of the Three Gorges Reservoir from 1997 to 2012.
Zhao Rui CHANG ; Liang LU ; De Qiang MAO ; Hui Ming PAN ; Lian Gui FENG ; Xiao Bing YANG ; Feng Feng LIU ; Yuan Yuan HE ; Jing ZHANG ; Wei Zhong YANG
Biomedical and Environmental Sciences 2016;29(3):197-204
OBJECTIVETo investigate the impact of impoundment and active public health interventions on rodent populations and rodent-borne diseases in the Three Gorges reservoir region from 1997 to 2012.
METHODSSurveillance data from 1997 to 2012 were extracted from the Public Health Surveillance System of The Three Gorges established in 1997. Temporal changes in the incidences of hemorrhagic fever with renal syndrome (HFRS) and leptospirosis, rodent density, pathogen-carrying rates, and their correlations were analyzed.
RESULTSThe average indoor and outdoor rodent densities decreased overall from 1997 to 2012. The average densities decreased by 47.72% (from 4.38% to 2.29%) and 39.68% (from 4.41% to 2.66%), respectively, after impoundment (2003-2012) compared with before impoundment (1997-2002). The average annual incidence rates of HFRS and leptospirosis were 0.29/100,000 and 0.52/100,000, respectively, and decreased by 85.74% (from 0.68/100,000 to 0.10/100,000) and 95.73% (from 1.47/100,000 to 0.065/100,000), respectively, after impoundment compared with before impoundment. Incidences of HFRS and leptospirosis appear to be positively correlated with rodent density in the reservoir area.
CONCLUSIONThis study demonstrated that rodent density and incidences of rodent-borne diseases decreased and were maintained at low levels during construction of the Three Gorges dam. Measures that reduce rodent population densities could be effective in controlling rodent-borne diseases during large-scale hydraulic engineering construction.
Animal Distribution ; Animals ; China ; epidemiology ; Disease Reservoirs ; Hantavirus Infections ; epidemiology ; veterinary ; Leptospirosis ; epidemiology ; virology ; Population Density ; Rodent Diseases ; epidemiology ; microbiology ; virology ; Rodentia ; Seasons ; Time Factors ; Water Supply ; Zoonoses
6.Characterization of the Multidrug-Resistant Acinetobacter species Causing a Nosocomial Outbreak at Intensive Care Units in a Korean Teaching Hospital: Suggesting the Correlations with the Clinical and Environmental Samples, Including Respiratory Tract-rel.
Hae Sun CHUNG ; Yangsoon LEE ; Eun Suk PARK ; Dong Suk LEE ; Eun Jin HA ; Myungsook KIM ; Dongeun YONG ; Seok Hoon JEONG ; Kyungwon LEE ; Yunsop CHONG
Annals of Clinical Microbiology 2014;17(2):29-34
BACKGROUND: Acinetobacter spp. is an important nosocomial pathogen for which increasing resistance to multiple antimicrobial agents has been observed. Prevalence of multidrug-resistant (MDR) Acinetobacter spp. in the intensive care unit (ICU) at a teaching hospital in Korea started to increase in 2008. The aim of this study was to determine the source of pathogen spread and to characterize the emerging strains at an early stage of outbreak. METHODS: Samples from respiratory instruments and fomites in the ICUs, as well as from the healthcare workers, were cultured to identify the sources of MDR Acinetobacter spp. Antimicrobial susceptibility was determined by the CLSI disk diffusion method. Pulsed field gel electrophoresis (PFGE) was performed for clinical and environmental isolates in order to determine clonality. Carbapenemase genes were detected by multiplex PCR. Infection control measures including peer-monitoring of hand washing, environmental cleaning and standard precautions were enforced. RESULTS: Among the samples from the ICU tools (105) and healthcare worker's hands (44), 31 (30%) and 2 (5%) respective samples yielded MDR Acinetobacter spp. Among the environmental samples, 90% were from respiratory-related equipment. The majority of clinical and environmental MDR Acinetobacter spp. (44/55) belonged to the pulsotype A. baumannii and carried both bla(OXA-51)-like and bla(OXA-23)-like genes. Even though infection-control measures were enforced, prevalence of MDR Acinetobacter spp. continues to increase. CONCLUSION: An outbreak of MDR Acinetobacter spp. in a Korean hospital was caused by A. baumannii carrying the bla(OXA-23)-gene and was correlated with contaminated respiratory-related instruments in the ICUs. More intensive measures for nosocomial infection control are needed for successful prevention of Acinetobacter spread in hospitals.
Acinetobacter*
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Anti-Infective Agents
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Cross Infection
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Delivery of Health Care
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Diffusion
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Disease Outbreaks
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Electrophoresis, Gel, Pulsed-Field
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Fomites
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Hand
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Hand Disinfection
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Hospitals, Teaching*
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Infection Control
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Intensive Care Units*
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Korea
;
Multiplex Polymerase Chain Reaction
;
Prevalence
8.Identification of Bacterial Flora on Cellular Phones of Dentists.
International Journal of Oral Biology 2014;39(3):137-143
Dental professionals are repeatedly exposed to many microorganisms present in both blood and saliva. Thus, dental professionals are at a greater risk of acquiring and spreading infections, and the implementation of infections control guidelines is necessary. Cellular phones have become a necessary device for communicating in hospitals. Cellular phones contaminated with bacteria may serve as a fomite in the transmission of pathogens by the hands of medical personnel. Nevertheless, studies about rate and levels of bacterial contamination of cellular phones have been extremely limited with regards to dental personnel. The purpose of this study was to identify bacterial flora on the cellular phones of dentists by a molecular biological method using the 16S rRNA cloning and sequencing method. We acquired total 200 clones from dentists' cell phones and identified the bacterial species. Pseudomonas (34.6%), Lactobacillus (18.5%), Azomonas (11.5%), and Janthinobacterium (6%) were the dominant genera on dentists' cell phones. The oral bacteria identified were Anaerococcus lactolyticus, Gibbsiella dentisursi, Lactobacills leiae, Streptococcus mitis, Streptococcus oligofermentans, and Streptococcus sanguinis. Pathogenic bacteria and opportunistic pathogens such as Carnobacterium funditum, Raoultella planticola, Shigella flexneri, Lactobacillus iners, Staphylococcus aureus, and Staphylococcus epidermidis were also identified.
Bacteria
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Carnobacterium
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Cellular Phone*
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Clone Cells
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Cloning, Organism
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Dentists*
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Fomites
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Hand
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Humans
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Lactobacillus
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Pseudomonadaceae
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Pseudomonas
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Saliva
;
Shigella flexneri
;
Staphylococcus aureus
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Staphylococcus epidermidis
;
Streptococcus
;
Streptococcus mitis
9.The impact of water level changes on the Oncomelania snail habitats in Poyang Lake regions before and after the impoundment of Three Gorges reservoir.
Rong ZHU ; Yi-biao ZHOU ; Li-juan ZHANG ; Zhan-ying HE ; Xiao-lin XU ; Jia-gang GUO ; Gen-ming ZHAO
Chinese Journal of Preventive Medicine 2013;47(3):219-222
OBJECTIVETo explore the impact of the impoundment of Three Gorges reservoir on Oncomelania snail habitats of Poyang Lake.
METHODSFour counties with schistosomiasis endemic around the Poyang Lake, naming as Xingzi, Duchang, Jinxian and Xinjian, were selected as study areas. The average daily water level of four major hydrological stations near the above 4 counties from 1997 to 2008 were collected, as well as the elevation of 215 marshlands with snails in those 4 counties, the data of schistosomiasis endemic situation and snail survey of 4 counties in the year before the impoundment of Three Gorges reservoir (2002) and the 6th year after the impoundment of Three Gorges reservoir (2008). The fluctuations of water levels of Poyang Lake, flooding day of marshland with snails as well as the changes of the indicators in snail survey and prevention and control measures before and after the impoundment of Three Gorges reservoir were compared.
RESULTSBefore the impoundment of Three Gorges reservoir, the fluctuations of average water level of the four hydrological stations around Poyang Lake was 6.91-12.93 m; which reduced to 5.72 - 10.75 m after the impoundment. The D-value of the fluctuations of average water level was (1.06 ± 0.47) m. The date of the annual maximum water level delayed by an average of 12 d; while the date of annual minimum water level arrived an average of 12 d earlier than the impoundment of Three Gorges reservoir. The average flooding days of marshland with snails were separately (100.04 ± 42.06) d before the impoundment and (64.13 ± 22.30) d after the impoundment. The difference was statistically significant (t = 3.70, P < 0.05). The density of snails in the 4 counties around Poyang Lake was 0.8437/0.1 m(2) after the impoundment; declining by 31.04% from the snail density (1.2234/0.1 m(2)) before the impoundment. The density of infectious snails was 0.0014/0.1 m(2) after the impoundment; dropping by 67.34% from it (0.0042/0.1 m(2)) before the impoundment; the infection rate of snails was separately 0.34% after the impoundment and 0.16% before the impoundment. The difference was statistically significant (χ(2) = 53.25, P < 0.05). The coverage rate of chemotherapy increased from 4.45% (35 558/798 200) in 2002 to 9.80% (79 457/810 400) in 2008; the difference was statistically significant (χ(2) = 17 336.63, P < 0.05). The coverage rate of snail killing increased from 1.35% (389.04/28 824.66) in 2002 to 7.49% (2260.90/30 166.22) in 2008; the difference was also statistically significant (χ(2) = 28 824.66, P < 0.05).
CONCLUSIONThe impact of the impoundment of Three Gorges reservoir shortened the flooding days of marshland with snails and helped the prevention and control of schistosomiasis in Poyang Lake regions as the environment went against the breeding of the snails.
Animals ; Disease Reservoirs ; Ecosystem ; Environmental Monitoring ; Lakes ; Snails ; physiology
10.Challenges of dengue control.
Annals of the Academy of Medicine, Singapore 2013;42(12):696-697

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