1.Precise identification of a cryptic balanced translocation in a couple with recurrent spontaneous abortions using C-MoKa technique.
Rui FAN ; Yaru LIU ; Tingting JI ; Xiaojuan XU ; Xuening DING ; Xiaoling MA
Chinese Journal of Medical Genetics 2026;43(1):64-69
OBJECTIVE:
Chromosome conformation-based karyotype analysis (C-MoKa) technology was used to test a couple who had experienced multiple adverse pregnancies in order to provide them with genetic counseling and reproductive guidance.
METHODS:
A couple presented at the Reproductive Medicine Center of the First Hospital of Lanzhou University in 2023 was selected as the study subject. Through C-MoKa testing, copy number variation sequencing (CNV-seq), and preimplantation genetic testing for aneuploidy (PGT-A), it was found that the couple's repeatedly miscarried fetuses and abnormal embryos exhibited highly similar chromosomal structural abnormalities. Using C-MoKa, the potential genetic abnormalities in both partners were traced, and reproductive guidance was provided based on the result. This study was approved by the Medical Ethics Committee of the Hospital (Ethics No.: LDYYSZLLKH2025-09).
RESULTS:
CNV-seq analysis of the couple's miscarriage fetal chorionic villi showed del(18)(q21.2q23)(28.90 Mb) and dup(13)(q31.2q34)(26.26 Mb). Chromosomal karyotyping analysis of both partners showed no abnormality. From 2024 to 2025, the couple underwent three rounds of PGT-A assisted reproduction. The first embryo test showed del(13)(q31.2q34)(26.77 Mb) and dup(18)(q21.2q23)(29.08 Mb). The second embryo test showed dup(13)(q31.2q34)(26.26 Mb) and del(18)(q21.2q23)(28.90 Mb). And the third embryo test results showed complex chromosomal abnormalities. In 2025, after genetic counseling, the couple had opted C-MoKa test, which has detected no abnormality in the wife, but a balanced 46,XY,t(13;18)(q31.2;q21.2) translocation in the husband.
CONCLUSION
As a high-throughput sequencing method based on the three-dimensional conformation of chromatin, C-MoKa has the advantages of high resolution and high accuracy, and can accurately detect balanced translocations with similar banding patterns. It has therefore offered a powerful new tool for chromosomal analysis.
Female
;
Humans
;
Male
;
Pregnancy
;
Abortion, Habitual/genetics*
;
DNA Copy Number Variations
;
Karyotyping/methods*
;
Preimplantation Diagnosis
;
Translocation, Genetic
2.Genetic analysis of two cases of submicroscopic chromosomal structural variants leading to abnormal pregnancies.
Chengxiu XIE ; Xiong ZHU ; Yacong WANG ; Qingsong LIU
Chinese Journal of Medical Genetics 2026;43(2):143-150
OBJECTIVE:
To investigate the genetic mechanism for adverse pregnancies due to submicroscopic chromosomal structural variants in two cases, and to provide a precise guidance for preimplantation genetic testing.
METHODS:
Two families who had visited Chengdu Women's and Children's Central Hospital for reproduction guidance due to recurrent miscarriages, adverse pregnancy history and abnormal genetic testing of the offspring in June and December 2023 were selected as the study subjects. Chromosomal karyotyping and optical genome mapping (OGM) were carried out on peripheral blood samples from the two couples, and preimplantation genetic testing for structural rearrangement (PGT-SR) were performed on the blastocyst trophoblasts. This study was approved by the Medical Ethics Committee of the Hospital (Ethic No.: 2023-23).
RESULTS:
No abnormality was found on the G-banded karyotyping analysis for both couples. The OGM results revealed that the female partner of couple 1 had a translocation between 4pter-p16.3 (3.99 Mb) and 11pter-p15.4 (2.66 Mb), whilst no abnormality was found in the male partner. Similarly, the male partner of couple 2 had a translocation between 19q13.43-qter (1.90 Mb) and 22q13.31-qter (3.34 Mb). No abnormality was found in the female partner of couple 2. Neither breakpoints nor the adjacent region had involved an OMIM gene, except the formation of a fusion gene ZIM2-AS1-Z82186.1 (Both genes are non-coding, and the fusion gene was deemed as variant of unknown significance). PGT-SR of 11 blastocysts derived from couple 1 revealed that one embryo was suitable for priority transfer, three embryos were suitable for transfer, one embryo was recommended for genetic counselling, and six embryos were unsuitable for the transfer. For couple 2, six blastocysts were tested, of which only one embryo was deemed suitable for transfer.
CONCLUSION
When genetic testing of offspring indicates copy number variations such as deletions, duplications or mosaicism, the high-resolution OGM technique can be selected to screen parents for submicroscopic chromosomal structural variations. The result can facilitate accurate assessment for the risk of recurrence in offspring, selection of suitable method for reproduction, and identifying targets for PGT.
Humans
;
Female
;
Pregnancy
;
Adult
;
Male
;
Karyotyping
;
Chromosome Aberrations
;
Abortion, Habitual/genetics*
;
Preimplantation Diagnosis
;
Genetic Testing
3.Application of artificial intelligence-assisted chromosome karyotyping analysis in prenatal diagnosis of chromosomal mosaicism.
Ling ZHAO ; Shiwei SUN ; Qinghua ZHENG ; Qing YU ; Chongyang ZHU ; Ling LIU ; Yueli WU
Chinese Journal of Medical Genetics 2026;43(3):180-187
OBJECTIVE:
To explore the application value of artificial intelligence (AI)-assisted chromosomal karyotype analysis in the diagnosis of prenatal chromosomal mosaicism.
METHODS:
A retrospective analysis was conducted on 172 pregnant women who underwent amniocentesis at the Department of Medical Genetics and Prenatal Diagnosis, the Third Affiliated Hospital of Zhengzhou University between January 2019 and December 2024. All cases whose fetuses were diagnosed with chromosomal mosaicism via karyotype analysis and stratified into two groups based on the analytical software employed: the conventional analysis group (n = 70), which utilized Leica analysis software for karyotype image recognition and cell counting; and the AI-assisted analysis group (n = 102), which utilized AI-assisted software for the same procedures. The clinical performance of AI-assisted karyotype analysis in diagnosing chromosomal mosaicism was comprehensively evaluated by comparing the types of mosaic karyotypes, distribution of mosaic ratios, and verification outcomes of different detection modalities between the two groups. This study was approved by the Medical Ethics Committee of the Third Affiliated Hospital of Zhengzhou University (Ethics No.: 2024-406-01).
RESULTS:
No statistically significant difference was observed in baseline characteristics (maternal age, gestational week, and indications for prenatal diagnosis) between the two groups. Regarding the detection efficacy for numerical and structural mosaicisms, no significant difference was found in the detection of numerical mosaicism. However, the conventional analysis group exhibited a significantly higher detection rate of autosomal structural mosaicism compared to the AI-assisted group (11.43% vs. 0.98%, P < 0.05). Numerical mosaicism cases were further verified using copy number variation sequencing (CNV-seq) and/or fluorescence in situ hybridization (FISH). The AI-assisted group demonstrated a significantly lower inconsistency rate (5.56% vs. 20.41%, P < 0.05) compared to the conventional group. For low-proportion (< 10%) chromosomal mosaicism, the AI-assisted group had a significantly lower detection rate (13.25% vs. 29.69%, P < 0.05). Subsequent validation of low-proportion mosaicism by CNV-seq and/or FISH showed a higher consistency rate in the AI-assisted group (81.82% vs. 54.55%), though the difference did not reach statistical significance (P = 0.360).
CONCLUSION
For the karyotyping analysis of prenatal chromosomal mosaicism, AI-assisted karyotype analysis shows high accuracy and consistency in identifying numerical chromosomal mosaicism, particularly in reducing the detection of low-proportion (< 10%) mosaicism while improving verification accuracy. AI-assisted analysis can significantly improve the detection accuracy of numerical mosaicism and mitigate the risk of misclassification for low-proportion (< 10%) mosaicism, thereby providing more precise clinical evidence for the prenatal diagnosis of chromosomal mosaicisms.
Humans
;
Female
;
Mosaicism
;
Pregnancy
;
Karyotyping/methods*
;
Artificial Intelligence
;
Prenatal Diagnosis/methods*
;
Adult
;
Retrospective Studies
;
Chromosome Disorders/genetics*
;
Amniocentesis
4.From prenatal screening to passive diagnosis in adulthood: Phenotypic association analysis of 224 patients with Klinefelter syndrome.
Huanhuan ZHANG ; Yong WU ; Yamei XIE ; Qingsong LIU
Chinese Journal of Medical Genetics 2026;43(3):188-196
OBJECTIVE:
To investigate the detection patterns, clinical phenotypic characteristics, and differences in diagnostic timeliness of Klinefelter syndrome (KS) across prenatal and postnatal stages, with an aim to provide a basis for optimizing strategies for early screening, diagnosis, and intervention.
METHODS:
A retrospective study was conducted to analyze data from two phases. The prenatal diagnosis group included 33,302 pregnant women who underwent amniocytic karyotyping due to advanced maternal age, abnormal ultrasound findings, or high-risk non-invasive prenatal testing (NIPT). The postnatal diagnosis group included 52,101 patients who underwent peripheral blood karyotyping due to primary infertility, abnormal external genitalia, or growth and developmental abnormalities. Additionally, medical histories of adult diagnosed patients were reviewed retrospectively to identify early occult symptoms. This study was approved by the Medical Ethics Committee of Chengdu Women's and Children's Central Hospital (Ethics No.: LCYJ-2025-030).
RESULTS:
In the prenatal group, 96 cases of KS were detected (detection rate 0.29%). The primary indications for referral were NIPT indicating sex chromosome abnormalities (45.83%), advanced maternal age (16.66%), and ultrasound abnormalities (17.70%). In the postnatal group, 128 cases of KS were detected (detection rate 0.25%). Clinical presentations were primarily primary infertility/azoospermia (77.34%), and the patients were predominantly adults (84.40%). Retrospective analysis revealed that adult patients presented with specific physical signs that had been overlooked during childhood.
CONCLUSION
As KS lacks typical early clinical manifestations, diagnosis is often delayed until adulthood when reproductive needs arise, showing a pattern of "passive detection" and resulting in missed opportunities for optimal intervention. By conducting a comparative analysis of prenatal diagnostic data and postnatal retrospective data, a risk association model linking prenatal screening indications with childhood-specific signs was developed. This study has provided empirical evidence for establishing a multidisciplinary, full life-cycle management system of "screening ~ diagnosis ~ monitoring ~ intervention" helping to shift from "passive detection in adulthood" to "proactive management across the entire life course," and laid a foundation for improving early diagnosis rate and long-term quality of life for patients.
Humans
;
Klinefelter Syndrome/genetics*
;
Female
;
Adult
;
Pregnancy
;
Retrospective Studies
;
Prenatal Diagnosis/methods*
;
Male
;
Phenotype
;
Karyotyping
;
Young Adult
;
Adolescent
;
Middle Aged
5.Undiagnosed 33-Year-Old Filipino male HIV case presenting initially as stroke in the young: A case report.
Samantha Karla Dv INONCILLO ; Joseree-ann S. CATINDIG ; Maria Rhona M. BERGANTIN
Journal of Medicine University of Santo Tomas 2026;10(1):1913-1917
Cerebrovascular disease is uncommon in patients with HIV, occurring in up to 1.9% of patients, 0.2% were presenting with transient ischemic attacks. The central nervous system is the first part of the body to be affected by the human immunodeficiency virus. This case report is a unique presentation of a 33-year-old male who presented with focal neurologic deficits that lasted for one hour with a background of promiscuous history. The patient was positive for HIV screening test and CD4 count and was started on a combination of antiretroviral therapy. This is the first documented case report in the Philippines. This case report demonstrates the need for a high index of suspicion for early detection of the cause in HIV-positive patients with recurrent transient ischemic attacks, given the high morbidity and mortality that is associated with this condition if delayed or undiagnosed.
Human ; Male ; Adult: 25-44 Yrs Old ; Neurologic Manifestations ; Cerebrovascular Disorders ; Nervous System ; Central Nervous System ; Cd4 Lymphocyte Count
6.Comprehensive Case Analysis: Diagnosing and Managing Myositis in Newly Diagnosed Systemic Lupus Erythematosus Patients in Indonesia
Nabila Abiyasa Putri ; Awalia Awalia
Acta Medica Indonesiana 2026;58(1):94-98
Abstract
An 18-year-old female with Systemic Lupus Erythematosus (SLE) presented with bilateral thigh pain, fever, and diarrhea three days before admission. Diagnosed with SLE one month earlier, she reported prior symptoms, including joint pain, malar rash, hair loss, and hyperpigmented lesions. Initial investigations revealed elevated transaminase levels (AST 355, ALT 132), positive ANA, decreased complement levels (C3 68, C4 16.8), and raised creatine kinase (619). A muscle biopsy confirmed myositis. The patient was treated with immunosuppressant (a combination of steroids and hydroxychloroquine) and supportive therapy. By the eighth day of hospitalization, her symptoms, especially thigh pain, resolved. Electromyocardiography was done, and the results were normal, indicating therapeutic success. This case highlights the importance of prompt diagnosis and management of myositis as a rare SLE manifestation to achieve favorable outcomes.
Systemic Lupus Erythematosus (SLE)
;
Myositis
;
Muscle Biopsy
;
Electromyocardiography
7.Knowledge, Attitudes, and Practices of Medical Doctors on Adherence to Clinical Guidelines for Frozen Section Biopsy in a Tertiary Hospital
Alykca Therese C. Libres ; Aije Hope D. Bruzon-Hortel
Philippine Journal of Pathology 2026;(75th PSP Research Competition Abstracts):1-
Background:
Frozen section biopsy (FSB) is a critical intraoperative diagnostic
procedure that supports real-time surgical decision-making. Its accuracy and clinical
value depend not only on technical laboratory processes but also on physicians’
knowledge, attitudes, practices, and adherence to institutional clinical guidelines. In
tertiary hospitals with high surgical volume, variations in guideline compliance may
affect diagnostic reliability and patient safety.
Objective:
This study examined the knowledge, attitudes, and practices of medical
doctors regarding FSB and assessed their adherence to institutional clinical guidelines
and standards.
Methodology:
A descriptive-correlational research design was conducted among 105
surgical residents and fellows at a tertiary hospital in the Philippines. Data were collected
using a validated, researcher-developed questionnaire that measured knowledge,
attitudes, practices, and adherence to FSB clinical guidelines. Descriptive statistics were
used to summarize levels of knowledge, attitude, practice, and adherence. Correlation
analysis was performed to determine the relationships among these variables.
Results:
The respondents demonstrated a generally knowledgeable level of FSB
knowledge (mean = 2.51), a neutral attitude toward FSB implementation (mean =
3.17), and a high level of procedural practice compliance (mean = 4.03). Adherence
to institutional clinical guidelines was rated as sometimes observed across key domains,
particularly in referral processes and endorsement protocols. Significant associations
were identified between components of knowledge, attitudes, and practices and
adherence to FSB standards.
Conclusion
While medical doctors showed adequate procedural practice and
foundational knowledge of FSB, inconsistencies in adherence to institutional clinical
guidelines remain. Strengthening policy dissemination, clarifying professional roles in
FSB decision-making, and reinforcing interdisciplinary communication are necessary
to enhance compliance, improve diagnostic reliability, and promote patient safety.
Frozen Sections
;
Biopsy
8.Anterior Mediastinal Mystery: From Epithelioid Suspicion to a Diagnosis of Metaplastic Revelation
John Patrick O. Chang ; Rex Michael C. Santiago
Philippine Journal of Pathology 2026;(75th PSP Research Competition Abstracts):1-
Introduction:
Metaplastic thymoma is an exceptionally rare thymic epithelial neoplasm, with fewer than
40 cases reported in the literature. It is defined by a distinctive biphasic proliferation of epithelioid epithelial
nests and bland spindle cell fascicles, accompanied by a characteristic immunohistochemical profile. In limited
cytology specimens, the lack of architectural context and potentially incomplete sampling can obscure the
biphasic nature, leading to diagnostic difficulty. We describe a case initially interpreted as an epithelioid
neoplasm on fine needle aspiration (FNA), with subsequent resection confirming metaplastic thymoma.
Case Description:
A 66-year-old male presented with an anterior mediastinal mass. FNA revealed a highly
cellular specimen composed predominantly of polygonal tumor cells arranged in cohesive sheets. The cells
displayed round to ovoid, hyperchromatic nuclei with moderate to marked pleomorphism, irregular nuclear
membranes, conspicuous nucleoli, and abundant eosinophilic cytoplasm. Dystrophic calcifications were noted
within a hemorrhagic background. An epithelioid tumor was favored on cytologic evaluation.
The patient subsequently underwent video-assisted thoracoscopic surgery with excision of the mass. The
specimen was well-encapsulated, lobulated, and traversed by fibrous septations. Microscopically, the tumor
demonstrated a biphasic architecture: cohesive nests of epithelioid cells closely admixed with intersecting
fascicles of bland spindle cells. Immature T-lymphocytes were not identified.
Immunohistochemical staining showed diffuse cytokeratin and p40 positivity in the epithelioid component.
In contrast, the spindle cell component lacked cytokeratin expression but exhibited strong vimentin positivity
and patchy EMA reactivity. Both components were negative for CD5 and CD117. The Ki-67 proliferation
index was low (1–2%).
Discussion:
Diagnosing metaplastic thymoma on cytology is challenging due to the tumor’s inherently
biphasic architecture, which may not be adequately represented in limited FNA samples. In this case, the
cytologic material disproportionately sampled the epithelioid component, masking the spindle cell element
critical for diagnosis. Additionally, the lymphocyte-poor background mimicked type A or AB thymoma, further
contributing to potential misclassification.
Accurate diagnosis relies on careful integration of cytologic features with histologic, immunohistochemical,
radiologic, and clinical data. Recognition of this rare entity is important, as its behavior differs substantially
from other anterior mediastinal tumors, including thymic carcinoma and more aggressive thymoma subtypes.
Conclusion
Metaplastic thymoma can present as a purely epithelioid lesion on limited biopsy material,
obscuring its hallmark biphasic nature. Awareness of this rare thymic neoplasm and correlation with resection
findings are essential to avoid misdiagnosis. When accurately identified and completely excised, metaplastic
thymoma carries an excellent prognosis.
Biopsy, Fine-Needle
;
Thymoma
9.A strategy to reduce unnecessary prostate biopsies in patients with tPSA >10 ng ml -1 and PI-RADS 1-3.
Qi-Fei DONG ; Yi-Xun LIU ; Yu-Han CHEN ; Yi-Fan MA ; Tao ZHOU ; Xue-Feng FAN ; Xiang YU ; Chang-Ming WANG ; Jun XIAO
Asian Journal of Andrology 2025;27(4):531-536
We propose a strategy to reduce unnecessary prostate biopsies in Chinese patients with total prostate-specific antigen (tPSA) >10 ng ml -1 and Prostate Imaging Reporting and Data System (PI-RADS) scores between 1 and 3. Clinical data derived from 517 patients of The First Affiliated Hospital of USTC (Hefei, China) from January 2020 to December 2023 who met the screening criteria for the study were retrospectively collected. Independent predictors were identified via univariate and multivariate logistic regression analysis. The diagnostic capacity of clinical variables was evaluated using the receiver operating characteristic (ROC) curves and area under the curve (AUC). A prostate biopsy strategy was developed via risk stratification. Of the 517 patients, 17/348 (4.9%) with PI-RADS 1-2 were diagnosed with clinically significant prostate cancer (csPCa), and 27/169 (16.0%) patients with PI-RADS 3 were diagnosed with csPCa. The appropriate prostate-specific antigen density (PSAD) cut-off values were 0.45 ng ml -2 for PI-RADS 1-2 patients and 0.3 ng ml -2 for PI-RADS 3 patients. The appropriate prostate volume (PV) cut-off values were 40 ml for PI-RADS 1-2 patients and 50 ml for PI-RADS 3 patients. The prostate biopsy strategy based on PSAD and PV developed in this study can reduce unnecessary prostate biopsies in patients with tPSA >10 ng ml -1 and PI-RADS 1-3. In the study, 66.5% (344/517) patients did not need to undergo prostate biopsy, at the expense of missing only 1.7% (6/344) patients with csPCa.
Humans
;
Male
;
Prostatic Neoplasms/diagnostic imaging*
;
Prostate-Specific Antigen/blood*
;
Aged
;
Middle Aged
;
Retrospective Studies
;
Prostate/diagnostic imaging*
;
Unnecessary Procedures/statistics & numerical data*
;
Biopsy/statistics & numerical data*
;
China
;
ROC Curve
10.Diagnostic algorithm in men suspected with nonobstructive azoospermia.
Mahdi BAZZI ; Matthew CHABOT ; Amarnath RAMBHATLA ; Eric CHUNG
Asian Journal of Andrology 2025;27(3):307-310
This review focuses on the diagnostic algorithm for nonobstructive azoospermia (NOA), a significant male factor contributing to infertility. NOA, characterized by the absence of sperm in the ejaculate, requires a systematic diagnostic approach to identify reversible conditions, genetic factors, and prognosis for achieving pregnancy. The diagnostic pathway involves semen analysis and a comprehensive evaluation for hormonal deficiencies, anatomical abnormalities, and genetic factors. The importance of medical history, physical examination, endocrine evaluation, imaging, and genetic testing is emphasized. This review highlights the significance of differentiating NOA from obstructive azoospermia (OA) and outlines key considerations for effective management, including surgical sperm retrieval and assisted reproductive techniques. Testicular biopsy is discussed as a definitive method to distinguish obstructive cases from nonobstructive cases, providing valuable prognostic information. Overall, a thorough and systematic diagnostic approach is essential for the effective management of men suspected with NOA, offering insights into potential treatment options and reproductive outcomes.
Humans
;
Azoospermia/therapy*
;
Male
;
Algorithms
;
Semen Analysis
;
Testis/pathology*
;
Sperm Retrieval
;
Biopsy
;
Infertility, Male/etiology*


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