1.Application of SNP linkage-based PGT-M to block the transmission of EFNB1 deletion in a Chinese family affected with Cranio-facial-nasal syndrome.
Boning SHEN ; Yurun TIAN ; Li WAN ; Ying ZHANG ; Zhifeng SUN
Chinese Journal of Medical Genetics 2025;42(12):1431-1436
OBJECTIVE:
To block the transmission of Cranio-facial-nasal syndrome (CFNS) caused by a large deletion of the EFNB1 gene through preimplantation genetic testing for monogenic disorders (PGT-M).
METHODS:
A patient with craniofacial deformities and his parents who had visited Shiyan People's Hospital in June 2020 were selected as the study subjects. The child underwent whole exome sequencing (WES) and qPCR validation. After genetic counseling, PGT-M was chosen for the reproductive blockage. This study was approved by the Ethics Committee of the Hospital (Ethics No.: sysrmyy-087).
RESULTS:
The child was diagnosed with CFNS due to a heterozygous deletion of exons 1-5 of the EFNB1 gene through WES and qPCR, which showed a X-linked dominant inheritance. The mother underwent ovarian stimulation with a modified PPOS protocol, which has yielded 11 oocytes. After ICSI fertilization, 4 blastocysts were formed, and MALBAC whole genome amplification was performed on the trophoblast biopsy cells, and SNP haplotypes of the family members and embryos were analyzed to indirectly determine the presence of maternal pathogenic haplotypes. Chromosomal copy number variation analysis was conducted through next-generation sequencing to screen for euploid embryos, resulting in the identification of two euploid embryos that did not carry the mutation of the EFNB1 gene. The first transfer was unsuccessful, but after adjusting the transfer timing through endometrial receptivity assessment (ERA), clinical pregnancy was achieved. Prenatal diagnosis at 19 weeks excluded the EFNB1 gene exons 1-5 deletion in the fetus. A healthy girl was delivered by Cesarean section at 38+6 weeks, and Q-PCR confirmed she has no aforementioned EFNB1 gene deletion.
CONCLUSION
This study has successfully blocked the transmission of CFNS caused by a large deletion of the EFNB1 gene (exons 1-5) using a PGT-M strategy, which may provide reference for the intervention of similar genomic variations that cannot be directly detected.
Humans
;
Female
;
Male
;
Craniofacial Abnormalities/diagnosis*
;
Ephrin-B1/genetics*
;
Polymorphism, Single Nucleotide/genetics*
;
Preimplantation Diagnosis/methods*
;
Pedigree
;
Asian People/genetics*
;
Craniosynostoses/genetics*
;
Pregnancy
;
Gene Deletion
;
Sequence Deletion
;
Genetic Testing/methods*
;
Adult
;
East Asian People
2.Prenatal ultrasonography of craniofacial abnormalities.
Annisa Shui Lam MAK ; Kwok Yin LEUNG
Ultrasonography 2019;38(1):13-24
Craniofacial abnormalities are common. It is important to examine the fetal face and skull Epub ahead of print during prenatal ultrasound examinations because abnormalities of these structures may indicate the presence of other, more subtle anomalies, syndromes, chromosomal abnormalities, or even rarer conditions, such as infections or metabolic disorders. The prenatal diagnosis of craniofacial abnormalities remains difficult, especially in the first trimester. A systematic approach to the fetal skull and face can increase the detection rate. When an abnormality is found, it is important to perform a detailed scan to determine its severity and search for additional abnormalities. The use of 3-/4-dimensional ultrasound may be useful in the assessment of cleft palate and craniosynostosis. Fetal magnetic resonance imaging can facilitate the evaluation of the palate, micrognathia, cranial sutures, brain, and other fetal structures. Invasive prenatal diagnostic techniques are indicated to exclude chromosomal abnormalities. Molecular analysis for some syndromes is feasible if the family history is suggestive.
Brain
;
Chromosome Aberrations
;
Cleft Palate
;
Cranial Sutures
;
Craniofacial Abnormalities*
;
Craniosynostoses
;
Female
;
Fetus
;
Humans
;
Magnetic Resonance Imaging
;
Micrognathism
;
Palate
;
Pregnancy
;
Pregnancy Trimester, First
;
Prenatal Diagnosis
;
Skull
;
Ultrasonography
;
Ultrasonography, Prenatal*
3.Unusual facies with delayed development and multiple malformations in a 14-month-old boy.
Chinese Journal of Contemporary Pediatrics 2017;19(8):921-925
Schinzel-Giedion syndrome is a rare autosomal dominant genetic disease and has the clinical features of severe delayed development, unusual facies, and multiple congenital malformations. In this case report, a 14-month-old boy had the clinical manifestations of delayed development, unusual facies (prominent forehead, midface retraction, hypertelorism, low-set ears, upturned nose, and micrognathia), and multiple congenital malformations (including cerebral dysplasia, dislocation of the hip joint, and cryptorchidism). The karyotype analysis and copy number variations showed no abnormalities, and whole exon sequencing showed a de novo heterozygous missense mutation, c.2602G > A (p. D868N), in SETBP1 gene. Therefore, the boy was diagnosed with Schinzel-Giedion syndrome. Myoclonic seizures in this boy were well controlled by sodium valproate treatment, and his language development was also improved after rehabilitation treatment. Clinical physicians should improve their ability to recognize such rare diseases, and Schinzel-Giedion syndrome should be considered for children with unusual facies, delayed development, and multiple malformations. Gene detection may help with the diagnosis of this disease.
Abnormalities, Multiple
;
diagnosis
;
genetics
;
Craniofacial Abnormalities
;
diagnosis
;
genetics
;
Developmental Disabilities
;
diagnosis
;
Face
;
abnormalities
;
Hand Deformities, Congenital
;
diagnosis
;
genetics
;
Humans
;
Infant
;
Intellectual Disability
;
diagnosis
;
genetics
;
Male
;
Nails, Malformed
;
diagnosis
;
genetics
4.The Importance of Multidisciplinary Management during Prenatal Care for Cleft Lip and Palate.
Hyun Ho HAN ; Eun Jeong CHOI ; Ji Min KIM ; Jong Chul SHIN ; Jong Won RHIE
Archives of Plastic Surgery 2016;43(2):153-159
BACKGROUND: The prenatal ultrasound detection of cleft lip with or without cleft palate (CL/P) and its continuous management in the prenatal, perinatal, and postnatal periods using a multidisciplinary team approach can be beneficial for parents and their infants. In this report, we share our experiences with the prenatal detection of CL/P and the multidisciplinary management of this malformation in our institution's Congenital Disease Center. METHODS: The multidisciplinary team of the Congenital Disease Center for mothers of children with CL/P is composed of obstetricians, plastic and reconstructive surgeons, pediatricians, and psychiatrists. A total of 11 fetuses were diagnosed with CL/P from March 2009 to December 2013, and their mothers were referred to the Congenital Disease Center of our hospital. When CL/P is suspected in the prenatal ultrasound screening examination, the pregnant woman is referred to our center for further evaluation. RESULTS: The abortion rate was 28% (3/11). The concordance rate of the sonographic and final diagnoses was 100%. Ten women (91%) reported that they were satisfied with the multidisciplinary management in our center. CONCLUSIONS: Although a child with a birth defect is unlikely to be received well, the women whose fetuses were diagnosed with CL/P on prenatal ultrasound screening and who underwent multidisciplinary team management were more likely to decide to continue their pregnancy.
Abortion, Induced
;
Child
;
Cleft Lip*
;
Cleft Palate
;
Congenital Abnormalities
;
Craniofacial Abnormalities
;
Diagnosis
;
Female
;
Fetus
;
Humans
;
Infant
;
Interdisciplinary Communication
;
Mass Screening
;
Mothers
;
Palate*
;
Parents
;
Plastics
;
Pregnancy
;
Pregnant Women
;
Prenatal Care*
;
Psychiatry
;
Ultrasonography
5.Prenatal genetic diagnosis for a fetus with atypical neurofibromatosis type 1 microdeletion.
Shaobin LIN ; Jianzhu WU ; Zhiqiang ZHANG ; Yuanjun JI ; Qun FANG ; Baojiang CHEN ; Yanmin LUO
Chinese Journal of Medical Genetics 2016;33(2):212-215
OBJECTIVETo analyze the correlation between atypical neurofibromatosis type 1(NF1) microdeletion and fetal phenotype.
METHODSFetal blood sampling was carried out for a woman bearing a fetus with talipes equinovarus. G-banded karyotyping and single nucleotide polymorphism array (SNP-array) were performed on the fetal blood sample. Fluorescence in situ hybridization (FISH) was used to confirm the result of SNP array analysis. FISH assay was also carried out on peripheral blood specimens from the parents to ascertain the origin of mutation.
RESULTSThe karyotype of fetus was found to be 46, XY by G-banding analysis. However, a 3.132 Mb microdeletion was detected in chromosome region 17q11.2 by SNP array, which overlaped with the region of NF1 microdeletion syndrome. Analyzing of the specimens from the fetus and its parents with FISH has confirmed it to be a de novo deletion.
CONCLUSIONTalipes equinovarus may be an abnormal sonographic feature of fetus with atypical NF1 microdeletion which can be accurately diagnosed with SNP array.
Adult ; Chromosome Banding ; Chromosome Deletion ; Chromosomes, Human, Pair 17 ; genetics ; Craniofacial Abnormalities ; diagnosis ; embryology ; genetics ; Female ; Gene Deletion ; Humans ; Intellectual Disability ; diagnosis ; embryology ; genetics ; Karyotyping ; Learning Disorders ; diagnosis ; genetics ; Male ; Neurofibromatoses ; diagnosis ; embryology ; genetics ; Neurofibromatosis 1 ; diagnosis ; embryology ; genetics ; Pregnancy ; Prenatal Diagnosis
6.A complicated case study: Hennekam syndrome.
Xiao-Lu DENG ; Fei YIN ; Guo-Yuan ZHANG ; Yuan-Dong DUAN
Chinese Journal of Contemporary Pediatrics 2015;17(1):77-80
Hennekam syndrome (HS) is a rare autosomal recessive syndrome characterized by defective lymphatic development. A 34-month-old boy with HS and who had unexplained developmental retardation and hypoalbuminemia as main clinical manifestations is reported here. He had a history of generalized edema and poor feeding. He was not thriving well. He manifested as facial anomalies (hypertelorism, flat nasal bridge and flat face), fracture of teeth, and superficial lymph nodes enlargement. He had low serum total protein, low serum albumin, and low serum immunoglobulin levels. Duodenal bulb biopsy revealed lymphangiectasia. Color Doppler ultrasound, magnetic resonance imaging and CT scan showed multi-site lymphangioma, and HS was thus confirmed. Mutations in CCBE1 and FAT4 have been found responsible for the syndrome in a part of patients. Diagnosis of the disease depends on the familial history, clinical signs, pathological findings and genetic tests.
Child, Preschool
;
Craniofacial Abnormalities
;
diagnosis
;
etiology
;
therapy
;
Genital Diseases, Male
;
diagnosis
;
etiology
;
therapy
;
Humans
;
Lymphangiectasis, Intestinal
;
diagnosis
;
etiology
;
therapy
;
Lymphedema
;
diagnosis
;
etiology
;
therapy
;
Male
;
Syndrome
7.The First Korean Patient with Potocki-Shaffer Syndrome: A Rare Cause of Multiple Exostoses.
Young Bae SOHN ; Shin Young YIM ; Eun Hae CHO ; Ok Hwa KIM
Journal of Korean Medical Science 2015;30(2):214-217
Potocki-Shaffer syndrome (PSS, OMIM #601224) is a rare contiguous gene deletion syndrome caused by haploinsufficiency of genes located on the 11p11.2p12. Affected individuals have a number of characteristic features including multiple exostoses, biparietal foramina, abnormalities of genitourinary system, hypotonia, developmental delay, and intellectual disability. We report here on the first Korean case of an 8-yr-old boy with PSS diagnosed by high resolution microarray. Initial evaluation was done at age 6 months because of a history of developmental delay, hypotonia, and dysmorphic face. Coronal craniosynostosis and enlarged parietal foramina were found on skull radiographs. At age 6 yr, he had severe global developmental delay. Multiple exostoses of long bones were detected during a radiological check-up. Based on the clinical and radiological features, PSS was highly suspected. Subsequently, chromosomal microarray analysis identified an 8.6 Mb deletion at 11p11.2 [arr 11p12p11.2 (Chr11:39,204,770-47,791,278)x1]. The patient continued rehabilitation therapy for profound developmental delay. The progression of multiple exostosis has being monitored. This case confirms and extends data on the genetic basis of PSS. In clinical and radiologic aspect, a patient with multiple exostoses accompanying with syndromic features, including craniofacial abnormalities and mental retardation, the diagnosis of PSS should be considered.
Child
;
Chromosome Deletion
;
Chromosome Disorders/diagnosis/*genetics/radiography
;
Chromosome Mapping
;
Chromosomes, Human, Pair 11/genetics/radiography
;
Craniofacial Abnormalities/genetics
;
Developmental Disabilities/genetics
;
Exostoses, Multiple Hereditary/diagnosis/*genetics/radiography
;
Humans
;
Male
;
Muscle Hypotonia/genetics
;
Oligonucleotide Array Sequence Analysis
;
Rare Diseases/*genetics
;
Republic of Korea
8.The First Korean Patient with Potocki-Shaffer Syndrome: A Rare Cause of Multiple Exostoses.
Young Bae SOHN ; Shin Young YIM ; Eun Hae CHO ; Ok Hwa KIM
Journal of Korean Medical Science 2015;30(2):214-217
Potocki-Shaffer syndrome (PSS, OMIM #601224) is a rare contiguous gene deletion syndrome caused by haploinsufficiency of genes located on the 11p11.2p12. Affected individuals have a number of characteristic features including multiple exostoses, biparietal foramina, abnormalities of genitourinary system, hypotonia, developmental delay, and intellectual disability. We report here on the first Korean case of an 8-yr-old boy with PSS diagnosed by high resolution microarray. Initial evaluation was done at age 6 months because of a history of developmental delay, hypotonia, and dysmorphic face. Coronal craniosynostosis and enlarged parietal foramina were found on skull radiographs. At age 6 yr, he had severe global developmental delay. Multiple exostoses of long bones were detected during a radiological check-up. Based on the clinical and radiological features, PSS was highly suspected. Subsequently, chromosomal microarray analysis identified an 8.6 Mb deletion at 11p11.2 [arr 11p12p11.2 (Chr11:39,204,770-47,791,278)x1]. The patient continued rehabilitation therapy for profound developmental delay. The progression of multiple exostosis has being monitored. This case confirms and extends data on the genetic basis of PSS. In clinical and radiologic aspect, a patient with multiple exostoses accompanying with syndromic features, including craniofacial abnormalities and mental retardation, the diagnosis of PSS should be considered.
Child
;
Chromosome Deletion
;
Chromosome Disorders/diagnosis/*genetics/radiography
;
Chromosome Mapping
;
Chromosomes, Human, Pair 11/genetics/radiography
;
Craniofacial Abnormalities/genetics
;
Developmental Disabilities/genetics
;
Exostoses, Multiple Hereditary/diagnosis/*genetics/radiography
;
Humans
;
Male
;
Muscle Hypotonia/genetics
;
Oligonucleotide Array Sequence Analysis
;
Rare Diseases/*genetics
;
Republic of Korea
9.Kleefstra syndrome: one case report.
Yutang LI ; Xin LI ; Ke WANG ; Mei HO
Chinese Journal of Pediatrics 2014;52(9):710-711

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