1.Molecular Epidemiology of Viral Conjunctivitis in the Southern Region of South Korea, 2012–2016.
Duck Woong PARK ; Min Ji KIM ; Kwang gon KIM ; Sun Ju CHO ; Hye Jung PARK ; Ji Hyun SHIN ; Yi Deun HA ; Mi Hee SEO ; Jang Hoon KIM ; Yeon LEE ; Myoung Doo PARK ; Hi Mo YOON ; Eun Sun KIM ; Young Jin HONG ; Hyeyoung KEE ; Jae Keun CHUNG
Journal of Bacteriology and Virology 2018;48(2):59-66
Epidemic keratoconjunctivitis (EKC) and acute hemorrhagic conjunctivitis (AHC) are common diseases caused by human adenoviruses (HAdV) and enteroviruses, respectively, in South Korea. However, there are limited studies on the molecular epidemiology of viral conjunctivitis in South Korea. The main objective of this study was to characterize the genotypes of adenoviruses and enteroviruses causing viral conjunctivitis in the southwest region of South Korea. We collected conjunctival swabs from 492 patients with suspected cases of viral conjunctivitis from 6 ophthalmic hospitals in Gwangju Metropolitan City, in South Korea, between 2012 and 2016. Of the 492 samples tested, HAdVs and enteroviruses were detected in 249 samples (50.6%) and 19 samples (3.9%), respectively. The genotype analysis detected HAdV-8 in 183 samples (73.5%), HAdV-37 in 14 samples (5.6%), and HAdV-3, and HAdV-4 in 9 samples (3.6%) each. We detected coxsackievirus A24 (CVA24) and coxsackievirus B1 (CVB1) in 8 samples (42.0%) and 4 samples (21.0%), respectively. We also reported for the first time HAdV-56-infected cases of EKC in South Korea. Furthermore, we found three cases of coinfection with HAdV and enterovirus genotypes in our samples. HAdV-8 and CVA24, the main causes of EKC and AHC, respectively, worldwide, were also found to be the predominant genotypes in our study.
Adenoviridae
;
Adenoviruses, Human
;
Coinfection
;
Conjunctivitis, Acute Hemorrhagic
;
Conjunctivitis, Viral*
;
Enterovirus
;
Genotype
;
Gwangju
;
Humans
;
Keratoconjunctivitis
;
Korea*
;
Molecular Epidemiology*
2.Molecular Identification and Phylogenetic Analyses of Coxsackievirus A24v Causing an Outbreak of Acute Hemorrhagic Conjunctivitis in Jiangxi, China, in 2010.
Dongmei YAN ; Ying XIONG ; Yang ZHANG ; Qiai YANG ; Shuxia ZHANG ; Tian GONG ; Tian ZHU ; Donavan WANG ; Hui ZHU ; Wenbo XU
Chinese Journal of Virology 2015;31(3):251-257
To identify the cause of an outbreak of acute hemorrhagic conjunctivitis (AHC) in Jiangxi (China) in 2010, 20 eye conjunctival swabs were first collected from AHC patients. Then, viruses were isola- ted and tested for human enterovirus 70, coxsackievirus A24 variant (CV-A24v) and adenovirus using the polymerase chain reaction. All CV-A24v isolates underwent sequencing of 3C and VP1 coding regions. Then, a phylogenetic tree was constructed for Jiangxi CV-A24v and worldwide CV-A24v based on,3C and VP1 regions, respectively. Ten out of 20 specimens were positive for CV-A24v, implying that the outbreak was caused by CV-A24v. The phylogenetic tree based on the 3C region showed that Jiangxi CV- A24v belonged to cluster 5 in genotype IV (GIV-C5) with strains isolated throughout the world after 2010, and were divided further into A and B lineages. Phylogenetic analyses of the VP1 region showed that all of the worldwide CV-A24v strains isolated after 2000 could be divided into five groups (1-5). Jiangxi CV-A24v was classified into group 5 and also divided further into A and B lineages upon analyses of the 3C region. These data suggested that CV-A24v causing AHC outbreaks in China in 2010 belonged to GIV-C3 and GIV-C5. At least two transmission lineages were circulated in Jiangxi in 2010. The classification of CV-A24v isolated after 2010 worldwide using the phylogenetic tree based on the VP1 region was almost consistent with that based on the 3C region and also had significant chronological clustering.
China
;
epidemiology
;
Conjunctivitis, Acute Hemorrhagic
;
epidemiology
;
virology
;
Coxsackievirus Infections
;
epidemiology
;
virology
;
Disease Outbreaks
;
Enterovirus C, Human
;
classification
;
genetics
;
isolation & purification
;
Genotype
;
Humans
;
Molecular Sequence Data
;
Phylogeny
;
Viral Proteins
;
genetics
3.A Case of Severe Enterovirus Pneumonia in an Immunocompetent Adult.
Yeungnam University Journal of Medicine 2013;30(1):58-61
Enterovirus commonly causes neurologic diseases (aseptic meningitis, encephalitis, etc.), hand-foot-mouth disease, herpangina, and acute hemorrhagic conjunctivitis. However, it rarely causes pneumonia in immunocompetent adults. In Korea, no case has been reported about pneumonia caused by enterovirus in healthy adults. We can cite the case of a 20-year-old woman who presented severe community-acquired pneumonia caused by enterovirus. The diagnosis was based on reverse transcriptase polymerase chain reaction (RT-PCR) of a respiratory specimen.
Adult
;
Conjunctivitis, Acute Hemorrhagic
;
Encephalitis
;
Enterovirus
;
Female
;
Herpangina
;
Humans
;
Korea
;
Meningitis
;
Pneumonia
;
Reverse Transcriptase Polymerase Chain Reaction
4.Identification and genetic characterization of coxsackievirus A24 isolated from patients with acute hemorrhagic conjunctivitis in Shandong Province.
Jing YANG ; Yi LIN ; Hai-Yan WANG ; Ze-Xin TAO ; Yan LI ; Peng CHEN ; Yao-Wen PEI ; Feng JI ; Xiao-Juan LIN ; Xian-Jun WANG ; Yao LIU ; Ai-Qiang XU
Chinese Journal of Virology 2012;28(6):663-669
To identify the pathogen of acute hemorrhagic conjunctivitis (AHC) in Shandong Province in 2010, eye mucous swab samples were collected from 26 patients in Qingdao and Linyi City. Real time-PCR assays for EV70, CVA24 and Adenovirus were performed on these samples. The result showed 17 samples (65.39%) were CVA24 positive while all the samples for HEV70 and Adenovirus detection were negative, which implied that CVA24 was the causative pathogen of this outbreak. A total of 10 virus strains isolated on Hep-2 cells were identified as CVA24 through VP1 amplification and nucleotide sequence analysis. The nucleotide and amino acid homologies on VP1 region among these isolates were 99.3%-100.0% and 99.5%-100.0%, respectively, and the strains aggregated together to one clade in phylogenetic tree. These results showed that the CVA24 circulating in Qingdao and Linyi City belonged to one transmission chain. Shandong CVA24s segregated into 5 different clades, and great nucleotide divergence was observed be tween AHC isolates and others.
Amino Acid Sequence
;
China
;
epidemiology
;
Conjunctivitis, Acute Hemorrhagic
;
epidemiology
;
virology
;
Enterovirus C, Human
;
chemistry
;
classification
;
genetics
;
isolation & purification
;
Genetic Variation
;
Humans
;
Molecular Sequence Data
;
Phylogeny
;
Sequence Homology, Amino Acid
;
Viral Proteins
;
chemistry
;
genetics
5.Study on the pathological and molecular characteristics of AHC epidemic in Zhejiang Province in 2010.
Ju-Ying YAN ; Yin CHEN ; Zhen LI ; Li-Ming GONG ; Yi-Yu LU ; Yan-Jun ZHANG
Chinese Journal of Virology 2011;27(5):421-426
To identify and trace the pathogen of acute hemorrhagic conjunctivitis (AHC) epidemic in Zhejiang Province in 2010. Viral nucleic acid of Enterovirus (EV) and Coxsackievirus A24 variant (CA24v) were directly detected by real-time RT-PCR from the conjunctival swab collected from suspected patients. The virus was isolated from the swab samples using Hep-2 cell. The viral RNAs were extracted from the isolated viruses and followed by RT-PCR to amplify VP1 gene and 3C protease region(3C). The amplified fragments were sequenced and phylogenetic trees were also constructed. Eight out of 13 swab samples from suspected patients were both positive for EV and CA24v RNA (61.5%), 6 CA24v strains were isolated (46.2%). The complete VP1 genes of CA24v in 4 sequenced virus strains were 915 nt in length and the complete 3C genes were 549 nt in length. All VP1 and 3C genes were confirmed without any insertion or deletion. The identity of nucleotide and amino acid in 3C between the 2010 isolated strains and the prototype strain EH24/70 were 85.2%-85.8% and 96.2%-96.7%, and that between the 2010 Zhejiang strains and the Zhejiang,Yunnan and Guangdong CA24v strains isolated between 2007-2008 were 93.4%-93.8% and 96.7%-97.3%, respectively. The phylogenetic tree of 3C indicated that the isolated CA24v viruses of Zhejiang in 2010 located in the CA24v IV genotype cluster 4 (GIV-C4) and all the VP1 genes located in the human Enterovirus C (EV-C) CA24v. These findings indicated that AHC epidemic in Zhejiang Province in 2010 was caused by CA24v GIV-C4 viruses and they most likely evolved from CA24v viruses circulating locally in external environment from 2002.
Amino Acid Sequence
;
China
;
epidemiology
;
Conjunctivitis, Acute Hemorrhagic
;
epidemiology
;
virology
;
Coxsackievirus Infections
;
epidemiology
;
virology
;
Disease Outbreaks
;
Enterovirus
;
classification
;
genetics
;
isolation & purification
;
Enterovirus Infections
;
epidemiology
;
virology
;
Genes, Viral
;
genetics
;
Humans
;
Molecular Sequence Data
;
Phylogeny
;
RNA, Viral
;
genetics
;
Sequence Alignment
;
Sequence Homology
6.Outbreak of acute hemorrhagic conjunctivitis in Beijing City in 2007 caused by coxsackievirus A24 variant: molecular identification and phylogenetic analysis.
Li-Xin DING ; Yong ZHANG ; Jie LI ; Xiang-Feng DOU ; Dong-Mei YAN ; Shuang-Li ZHU ; Hong-Qiu AN ; Wen-Bo XU
Chinese Journal of Virology 2009;25(4):251-256
In 2007, an outbreak of acute hemorrhagic conjunctivitis (AHC) occurred in Beijing. In order to identify the etiology of this outbreak, 57 eye conjunctival swabs were collected from 57 outpatient patients, and detected for adenovirus, human enterovirus 70 (HEV70) and Coxsackievirus A24 variant (CVA24v) genes by using RT-PCR or PCR methods. The results showed that 38 were positive for CVA24v, the positive rate was 66.7%, but none was positive for HEV70 and adenovirus, showing that this outbreak was caused by CVA24v. 9 viral isolates were obtained from 57 clinical specimens by using viral isolation method, and all were identified as CVA24v by molecular typing method. All 9 CVA24v isolates were performed by VP1 sequencing, the results showed that except for strain 0744/BJ/CHN/2007, the variability at nucleotide acid level and amino acid level among other 8 CVA24v were relatively low, and the homologies were more than 99.6% and 100.0%, respectively; the homologies of nucleotide acid and amino acid between strain 0744/BJ/CHN/2007 and other 8 CVA24v were 96.8%-97.2% and 99.7%, respectively. Phylogenetic analysis of 9 CVA24v revealed that they represented the Clade 4 and Clade 5 in Group I, showed that this outbreak was caused by at least 2 viral transmission chains. Comparing to 3C region of CVA24v frequently used before, VP1 region was considered as the most rigorous target for molecular epidemiology study of CVA24v. To enhance the research of sero-epidemiology and molecular epidemiology of CVA24v and to know the genetic characterizations and molecular evolution of CVA24v are most important to prevent and control the outbreaks of AHC in China.
China
;
epidemiology
;
Conjunctivitis, Acute Hemorrhagic
;
epidemiology
;
virology
;
Disease Outbreaks
;
Enterovirus C, Human
;
classification
;
genetics
;
isolation & purification
;
Humans
;
Molecular Epidemiology
;
Molecular Sequence Data
;
Phylogeny
;
Viral Proteins
;
genetics
7.Retraction: Detection and Phylogenetic Analysis of Coxsackievirus A24 Variant Causing Nation-wide Epidemic of Acute Hemorrhagic Conjunctivitis in Korea, 2002.
Infection and Chemotherapy 2007;39(1):63-63
We have submitted and published the above paper in Infection and Chemotherapy in 2003. Another paper with a condensed but almost same content as the above paper was submitted to and published in an English journal (Acute Hemorrhagic Conjunctivitis Caused by Coxsackievirus A24 Variant, South Korea, 2002. Emerg Infect Dis 2003). Our original intent was to introduce the study to all readers because the two journals seemed to cover different spectrum of readers. However, we did not follow the necessary steps for secondary publication. So we are asking the permission of the Editor to retract the above paper. We hereby regret to have to retract the paper.
Conjunctivitis
;
Conjunctivitis, Acute Hemorrhagic*
;
Drug Therapy
;
Enterovirus C, Human*
;
Korea*
;
Publications
8.Retraction: Detection and Phylogenetic Analysis of Coxsackievirus A24 Variant Causing Nation-wide Epidemic of Acute Hemorrhagic Conjunctivitis in Korea, 2002.
Infection and Chemotherapy 2007;39(1):63-63
We have submitted and published the above paper in Infection and Chemotherapy in 2003. Another paper with a condensed but almost same content as the above paper was submitted to and published in an English journal (Acute Hemorrhagic Conjunctivitis Caused by Coxsackievirus A24 Variant, South Korea, 2002. Emerg Infect Dis 2003). Our original intent was to introduce the study to all readers because the two journals seemed to cover different spectrum of readers. However, we did not follow the necessary steps for secondary publication. So we are asking the permission of the Editor to retract the above paper. We hereby regret to have to retract the paper.
Conjunctivitis
;
Conjunctivitis, Acute Hemorrhagic*
;
Drug Therapy
;
Enterovirus C, Human*
;
Korea*
;
Publications
9.Updates on Enterovirus Surveillance in Korea.
Youngmee JEE ; Doosung CHEON ; Wooyoung CHOI ; Jeongbae AHN ; Kisoon KIM ; Yoonseok CHUNG ; Jiwon LEE ; Kangbum LEE ; Hyosong NOH ; Kwisung PARK ; Sunhwa LEE ; Sunghan KIM ; Kyungsoon CHO ; Eunsun KIM ; Jaekeun JUNG ; Jaedeuk YOON ; Haewol CHO
Infection and Chemotherapy 2004;36(5):294-303
PURPOSE: We identified the causative viruses from patients with aseptic meningitis, acute hemorrhagic conjunctivitis and other enterovirus-related diseases to understand the epidemiological patterns and prevailing strains of enterovirus infections each year. MATERIALS AND METHODS: During 1999-2003, we examined 3,260 specimens from 2,939 patients with aseptic meningitis or other clinical manifestations for the presence of enteroviruses by using both cell culture/ neutralisation test and reverse transcription-polymerse chain reaction-sequencing. To investigate the etiological agents which caused an epidemic of acute haemorrhagic conjunctivitis, conjunctival swab samples from acute haemorrhagic conjunctivitis patients showing cytopathic effects in HEp2 cells were tested by enteroviral specific PCR. RESULTS: We identified 603 isolates of enteroviruses (20.5%) among 2,939 cases and 22 serotypes of human enteroviruses were isolated during this 5 year period. Echovirus 13 and coxsackievirus A24 in 2002 and coxsackievirus A9 in 2003 were the first enterovirus to be indentified in Korea since we began the enterovirus surveillance in 1993. While an epidemic of echovirus 13 infection in Korea began in Gwangju and Jeolla province in 2002 and spread to Seoul, Gyunggi, Busan, Ulsan and other regions, echovirus 6 isolates in 2002 were mainly detected in Busan specimens and some Gwangju samples. From the nucleotide sequencing of enteroviral PCR products of conjunctival swab specimens, we found 85% nucleotide homology to coxsackievirus A24 (D90457). CONCLUSIONS: We isolated 603 enteroviral isolates among 2939 cases during 1999-2003. Echovirus 13 and coxsackievirus A24 were the first enterovirus to be identified in Korea and caused nationwide epidemics in 2002.
Busan
;
Conjunctivitis
;
Conjunctivitis, Acute Hemorrhagic
;
Echovirus 6, Human
;
Enterovirus B, Human
;
Enterovirus Infections
;
Enterovirus*
;
Gwangju
;
Humans
;
Korea*
;
Meningitis, Aseptic
;
Polymerase Chain Reaction
;
Seoul
;
Ulsan
10.Updates on Enterovirus Surveillance in Korea.
Youngmee JEE ; Doosung CHEON ; Wooyoung CHOI ; Jeongbae AHN ; Kisoon KIM ; Yoonseok CHUNG ; Jiwon LEE ; Kangbum LEE ; Hyosong NOH ; Kwisung PARK ; Sunhwa LEE ; Sunghan KIM ; Kyungsoon CHO ; Eunsun KIM ; Jaekeun JUNG ; Jaedeuk YOON ; Haewol CHO
Infection and Chemotherapy 2004;36(5):294-303
PURPOSE: We identified the causative viruses from patients with aseptic meningitis, acute hemorrhagic conjunctivitis and other enterovirus-related diseases to understand the epidemiological patterns and prevailing strains of enterovirus infections each year. MATERIALS AND METHODS: During 1999-2003, we examined 3,260 specimens from 2,939 patients with aseptic meningitis or other clinical manifestations for the presence of enteroviruses by using both cell culture/ neutralisation test and reverse transcription-polymerse chain reaction-sequencing. To investigate the etiological agents which caused an epidemic of acute haemorrhagic conjunctivitis, conjunctival swab samples from acute haemorrhagic conjunctivitis patients showing cytopathic effects in HEp2 cells were tested by enteroviral specific PCR. RESULTS: We identified 603 isolates of enteroviruses (20.5%) among 2,939 cases and 22 serotypes of human enteroviruses were isolated during this 5 year period. Echovirus 13 and coxsackievirus A24 in 2002 and coxsackievirus A9 in 2003 were the first enterovirus to be indentified in Korea since we began the enterovirus surveillance in 1993. While an epidemic of echovirus 13 infection in Korea began in Gwangju and Jeolla province in 2002 and spread to Seoul, Gyunggi, Busan, Ulsan and other regions, echovirus 6 isolates in 2002 were mainly detected in Busan specimens and some Gwangju samples. From the nucleotide sequencing of enteroviral PCR products of conjunctival swab specimens, we found 85% nucleotide homology to coxsackievirus A24 (D90457). CONCLUSIONS: We isolated 603 enteroviral isolates among 2939 cases during 1999-2003. Echovirus 13 and coxsackievirus A24 were the first enterovirus to be identified in Korea and caused nationwide epidemics in 2002.
Busan
;
Conjunctivitis
;
Conjunctivitis, Acute Hemorrhagic
;
Echovirus 6, Human
;
Enterovirus B, Human
;
Enterovirus Infections
;
Enterovirus*
;
Gwangju
;
Humans
;
Korea*
;
Meningitis, Aseptic
;
Polymerase Chain Reaction
;
Seoul
;
Ulsan

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