1.Mechanism of Cnidii Fructus in the treatment of periodontitis with osteoporosis based on network pharmacology, molecular docking, and molecular dynamics simulation.
Miaomiao FENG ; Xiaoran XU ; Ningli LI ; Mingzhen YANG ; Yuankun ZHAI
West China Journal of Stomatology 2025;43(2):249-261
OBJECTIVES:
This study aimed to explore the active components, potential targets, and mechanism of Cnidii Fructus in the treatment of periodontitis with osteoprosis through network pharmacology, molecular docking, and molecular dynamics simulation technology.
METHODS:
The main chemical constituents and targets of Cnidii Fructus were screened using the TCMSP and SwissTargetPrediction databases, as well as literature reports. Targets of periodontitis and osteoporosis were predicted using different databases. The intersection targets of Cnidii Fructus, periodontitis, and osteoporosis were obtained using Venny 2.1. The protein-protein interaction network was formed on the STRING platform. Cytoscape 3.9.1 was used to construct the active component-intersection target interaction network, perform the topological analysis, and screen key targets and core active components. Furthermore, the Metascape database was used to perform gene ontology (GO) function and Kyoto encyclopedia of genes and genomes (KEGG) pathway enrichment analysis on the intersection targets. The top five key targets and core active components were selected as receptor proteins and ligand small molecules. Discovery Studio 2019 was used to dock ligands and receptors and visualize the docking results. Molecular dynamics simulation was conducted using Gromacs2022.3 to assess the stability of the interactions between the core active components and the main targets.
RESULTS:
A total of 20 potential active ingredients of Cnidii Fructus were screened, and 116 targets of Cnidii Fructus were obtained for treating periodontitis and osteoporosis. GO and KEGG analyses of the 116 targets showed that Cnidii Fructus may play a therapeutic role through the phosphoinositide 3-kinase-protein kinase B (PI3K-Akt) and advanced glycation end products-receptor for advanced glycation end products (AGE-RAGE) signaling pathways. Molecular docking showed that the core constituents were well bound to the main targets. Molecular dynamics simulations confirmed the stability of the Diosmetin-AKT1 complex system.
CONCLUSIONS
The preliminary discovery of the potential molecular pharmacological mechanism of Cnidii Fructus extract in the targeted treatment of periodontitis with osteoporosis through a multi-component, multitarget, and multi-pathway approach can serve as a theoretical foundation for future drug-development research and clinical application.
Molecular Docking Simulation
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Molecular Dynamics Simulation
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Network Pharmacology
;
Periodontitis/complications*
;
Drugs, Chinese Herbal/chemistry*
;
Osteoporosis/complications*
;
Humans
;
Protein Interaction Maps
;
Cnidium/chemistry*
2.Estrogenic activity of osthole and imperatorin in MCF-7 cells and their osteoblastic effects in Saos-2 cells.
Min JIA ; Yuan LI ; Hai-Liang XIN ; Ting-Ting HOU ; Nai-Dai ZHANG ; Hong-Tao XU ; Qiao-Yan ZHANG ; Lu-Ping QIN
Chinese Journal of Natural Medicines (English Ed.) 2016;14(6):413-420
There is an increasing interest in phytoestrogens due to their potential medical usage in hormone replacement therapy (HRT). The present study was designed to investigate the in vitro effects of estrogen-like activities of two widespread coumarins, osthole and imperatorin, using the MCF-7 cell proliferation assay and their alkaline phosphatase (ALP) activities in osteoblasts Saos-2 cells. The two compounds were found to strongly stimulate the proliferation of MCF-7 cells. The estrogen receptor-regulated ERα, progesterone receptor (PR) and PS2 mRNA levels were increased by treatment with osthole and imperatorin. All these effects were significantly inhibited by the specific estrogen receptor antagonist ICI182, 780. Cell cycle analysis revealed that their proliferation stimulatory effect was associated with a marked increase in the number of MCF-7 cells in S phase, which was similar to that observed with estradiol. It was also observed that they significantly increased ALP activity, which was reversed by ICI182,780. These results suggested that osthole and imperatorin could stimulate osteoblastic activity by displaying estrogenic properties or through the ER pathway. In conclusion, osthole and imperatorin may represent new pharmacological tools for the treatment of osteoporosis.
Alkaline Phosphatase
;
genetics
;
metabolism
;
Cell Line, Tumor
;
Cell Proliferation
;
drug effects
;
Cnidium
;
chemistry
;
Coumarins
;
pharmacology
;
Drugs, Chinese Herbal
;
pharmacology
;
Furocoumarins
;
pharmacology
;
Humans
;
MCF-7 Cells
;
Osteoblasts
;
cytology
;
drug effects
;
enzymology
;
Phytoestrogens
;
pharmacology
;
Receptors, Estrogen
;
genetics
;
metabolism
3.Studies on coumarins from fruit of Cnidium monnieri and their cytotoxic activities.
Xu-hong DUAN ; Yu-zhuo ZHANG ; Pei HE ; Zong-min MA ; Lin PEI
China Journal of Chinese Materia Medica 2015;40(18):3594-3597
This study is to study is to investigate the coumarins from Fruit of Cnidium monnieri and their cytotoxic activities. The constituents were separated by column chromatography, and their structures were elucidated by spectroscopic data analyses. The isolated compounds were evaluated for their cytoxic activities by MTT method. Eleven compounds were isolated and identified as osthole (1), bergaptan (2), xanthotoxol (3), xanthotoxin (4), imperatorin (5), isopimpinellin (6), osthenol (7), psoralen (8), 5,7-dimethoxycoumarin (9), oxypeucedaninhydrate (10), and swietenocoumarin F (11). Compounds 7, 9-11 were isolated from the Cnidium genus for the first time. Compounds 1,5,10 and 11 showed significant cytotoxic activities against L1210 cell lines at a concentration of 1 x 10(-5) mol x L(-1) with inhibitory rates of were 70.13, 63.10, 55.77, and 75.08% respectively.
Animals
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Cell Line, Tumor
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Cell Proliferation
;
drug effects
;
Cnidium
;
chemistry
;
toxicity
;
Coumarins
;
chemistry
;
isolation & purification
;
toxicity
;
Drugs, Chinese Herbal
;
chemistry
;
isolation & purification
;
toxicity
;
Fruit
;
chemistry
;
toxicity
;
Mice
;
Molecular Structure
4.Effect of osthol on apoptosis and bone resorption of osteoclasts cultured in vitro.
Lei-Guo MING ; Ming-Gang WANG ; Ke-Ming CHEN ; Jian ZHOU ; Gui-Qiu HAN ; Rui-Qing ZHU
Acta Pharmaceutica Sinica 2012;47(2):174-179
This study is to investigate the effect of osthol on osteoclasts' activity, bone resorption as well as apoptosis in vitro, and explore the mechanism of osthol in preventing osteoporosis. Osteoclasts were separated from long-limb bones of new born rabbits, cultured in 24-well plate with glass slices and bone slices, and treated by 1 x 10(-5) mol x L(-1) osthol. Osteoclasts were identified by observing live cells with phase contrast microscope, HE staining, TRAP staining and toluidine blue staining of bone resorption pits. The numbers of bone resorption pits were counted as well as the surface area of bone resorption on bone slice. Osteoclasts were stained with acridine orange to detect the cell apoptosis. The ratio of apoptotic osteoclasts was observed under fluorescence microscope. The gene expression of RANKL, OPG, TRAP and p-JNK1/2 protein expression were examined using real time PCR and Western blotting, respectively. Comparing with the control group without osthol, the rates of apoptotic osteoclasts increased obviously and the number and area of bone resorption pits decreased evidently with 1 x 10(-5) mol x L(-1) osthol. There is significant difference between control group and experiment group treated by 1 x 10(-5) mol x L(-1) osthol. Therefore, the osthol through RANK+RANKL/TRAF6/Mkk/JNK signal pathway inhibits the osteoclasts activity, enhances osteoclasts apoptotic and inhibits the bone resorption.
Acid Phosphatase
;
metabolism
;
Animals
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Apoptosis
;
drug effects
;
Bone Resorption
;
Cells, Cultured
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Cnidium
;
chemistry
;
Coumarins
;
isolation & purification
;
pharmacology
;
Gene Expression
;
Isoenzymes
;
metabolism
;
Mitogen-Activated Protein Kinase 8
;
metabolism
;
Mitogen-Activated Protein Kinase 9
;
metabolism
;
Osteoclasts
;
metabolism
;
pathology
;
Osteoprotegerin
;
metabolism
;
Phosphorylation
;
Plants, Medicinal
;
chemistry
;
RANK Ligand
;
metabolism
;
Rabbits
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Seeds
;
chemistry
;
Signal Transduction
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Tartrate-Resistant Acid Phosphatase
5.Effect of water-soluble polymers on the inhibition of osthole crystallization.
Acta Pharmaceutica Sinica 2010;45(12):1559-1564
This paper is to study the inhibitory effect of water soluble polymers--methyl cellulose (MC), hydroxypropyl methyl cellulose (HPMC), hydroxypropyl cellulose (HPC-M), poloxamer (F68) and polyvidon (PVP) on osthole (OST) crystallization and investigate the impact of polymer concentration and viscosity on crystallization behavior. Also, UV spectrophotometry method was used to determine the drug concentration at different time point to draw the OST concentration-time curve. Results show that HPMC has the most significant inhibition effect on OST crystallization, and drug concentration level is 1.61 times higher than that in control solution within 8 h followed by PVP (1.54) and MC (1.45) respectively. The kinetics of OST recrystallization can be described using first-order reaction, and the crystallization rate constants obtained by analyzing the regression equation indicate that HPMC-60SH-4000 and HPMC-60SH-10000 can greatly influence OST crystal formation. The dissolution rate of drugs precipitated from water-soluble polymer solutions is faster compared with controls in pH 1.2 HCl and pH 6.8 phosphate buffers, which demonstrated that water-soluble polymers can not only change the behavior of drug crystallization but markedly improve the dissolution rate of water insoluble drugs.
Cellulose
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analogs & derivatives
;
chemistry
;
Cnidium
;
chemistry
;
Coumarins
;
chemistry
;
isolation & purification
;
Crystallization
;
Hypromellose Derivatives
;
Kinetics
;
Methylcellulose
;
analogs & derivatives
;
chemistry
;
Plants, Medicinal
;
chemistry
;
Poloxamer
;
chemistry
;
Polymers
;
chemistry
;
Povidone
;
chemistry
;
Solubility
;
Viscosity
6.Metabolism of osthol in isolated hepatocytes of rat.
Li-Fang ZHANG ; Xiao HU ; Ping WANG ; Lei ZHANG
Acta Pharmaceutica Sinica 2009;44(10):1131-1135
The paper is aimed to study the metabolic characteristics of osthol (Ost) in isolated hepatocytes of rat to identify which isoforms of CYP450 were responsible for Ost metabolism in vitro. The concentration of Ost in isolated hepatocytes incubation system was determined by HPLC-UV. The effects of incubation time, substrate concentration and hepatocytes amount on the metabolic characteristics of Ost were investigated. CYP2C8 inhibitor quercetin (Que), CYP2C9 inhibitor sulfaphenazole (Sul), CYP2D6 inhibitor yohimbine (Yoh), CYP3A4 inhibitor troleandomycin (Tro) and CYP450 inducer rifampicin (Rif) were used to investigate their effects on the metabolism of Ost. The metabolism of Ost in isolated rat hepatocytes showed an enzymatic kinetic characteristics. Rif induced Ost elimination in rat hepatocytes; Yoh, Sul, Que did not have effects on Ost metabolism in vitro. Between 0-200 micromol x L(-1), Tro inhibited Ost metabolism in a concentration-dependent manner. CYP3A4 is the enzyme metabolizing Ost in vitro; CYP2C8, CYP2C9 and CYP2D6 did not involve in Ost metabolism in rat hepatocytes.
Animals
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Cells, Cultured
;
Cnidium
;
chemistry
;
Coumarins
;
isolation & purification
;
metabolism
;
Cytochrome P-450 CYP2D6 Inhibitors
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Cytochrome P-450 CYP3A
;
Cytochrome P-450 Enzyme Inhibitors
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Cytochrome P-450 Enzyme System
;
Hepatocytes
;
metabolism
;
Male
;
Plants, Medicinal
;
chemistry
;
Quercetin
;
pharmacology
;
Rats
;
Rats, Sprague-Dawley
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Rifampin
;
pharmacology
;
Sulfaphenazole
;
pharmacology
;
Troleandomycin
;
administration & dosage
;
pharmacology
;
Yohimbine
;
pharmacology
7.Chromatographic fingerprint of Cnidium monnieri.
Xian YANG ; Shui-Ping YANG ; Xue ZHANG
Acta Pharmaceutica Sinica 2007;42(8):877-881
To establish the method of HPLC-fingerprint analysis for the quality control of Cnidium monnieri L. Cuss., and identify its active constituents by HPLC-MS, 35 batches of samples were analyzed on a Shimadzu C18 column with a gradient of acetonitrile and 0.1% aqueous aceticacid at a flow rate of 1.0 mL x min(-1) and detected at 245 nm and 322 nm. Furthermore, the typical samples were detected by HPLC-DAD-MS under negative ion mode. 35 batches of Cnidium monnieri L. Cuss. samples were classified into four types based on the results of similarity analysis. According to the comparison of the t(R), MS data and UV maximum absorbance (lambda(max)) values with the standards, 8, 7, 4 and 2 coumarins components were identified in four types of Cnidium monnieri L. Cuss. extracts, separately. The method is repeatable and reliable, and it is capable of effectively controlling the quality of Cnidium monnieri L.
Chromatography, High Pressure Liquid
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methods
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Cnidium
;
chemistry
;
Coumarins
;
analysis
;
Ecosystem
;
Plants, Medicinal
;
chemistry
;
Quality Control
;
Reproducibility of Results
;
Seeds
;
chemistry
;
Sensitivity and Specificity
;
Spectrometry, Mass, Electrospray Ionization
;
Spectrophotometry, Ultraviolet
8.Simultaneous determination of 5 active components in Fructus Cnidii by HPLC.
China Journal of Chinese Materia Medica 2007;32(18):1883-1885
OBJECTIVETo develop an RP-HPLC method for simultaneous determination of 5 constituents in Fructus Cnidii.
METHODAnalysis was performed on an Alltech C18 (4.6 mm x 250 mm, 5 microm) column. The mobile phases were acetonitrile water and acetic acid with gradient elution. The flow rate was 1 mL x min(-1). The monitoring wavelength was 325 nm and 245 nm. The column temperature was 40 degrees C.
RESULTThe linear response ranges were 1-20 microg x mL(-1) (r = 0.999 9) for xanthotoxin, 1-20 microg x mL(-1) (r = 0.999 9) for isopimpinellin, 11-20 microg x mL(-1) (r = 0.999 8) for bergapten, 100-1 200 microg x mL(-1) (r = 0.999 7) for imperatorin, 100-2 000 microg x mL(-1) (r = 0.999 9) for osthole. The average recoveries were all above 95%.
CONCLUSIONThe method is simple, sensitive and accurate with good reproducibility.
Chromatography, High Pressure Liquid ; methods ; Cnidium ; chemistry ; Coumarins ; analysis ; Fruit ; chemistry ; Furocoumarins ; analysis ; Methoxsalen ; analogs & derivatives ; analysis ; Plants, Medicinal ; chemistry ; Reproducibility of Results
9.Progress in anti-osteoporosis activity of traditional Chinese medicine and medicinal plants.
Ting WANG ; Jin-chao ZHANG ; Meng-su YANG ; Pei-gen XIAO
China Journal of Chinese Materia Medica 2006;31(9):718-722
The anti-osteoporosis activity and mechanism of traditional Chinese medicine and medicinal plants were discussed. It is hoped that we can provide some reference for future drug development and introduction of traditional Chinese medicine to world.
Animals
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Cell Proliferation
;
drug effects
;
Cnidium
;
chemistry
;
Drugs, Chinese Herbal
;
isolation & purification
;
pharmacology
;
therapeutic use
;
Epimedium
;
chemistry
;
Humans
;
Medicine, Chinese Traditional
;
Osteoblasts
;
pathology
;
Osteoporosis
;
pathology
;
prevention & control
;
Phytotherapy
;
Plants, Medicinal
;
chemistry
;
Polypodiaceae
;
chemistry
10.Progress in study of chemical constituents and anti-tumor activities of Cnidium monnieri.
China Journal of Chinese Materia Medica 2005;30(17):1309-1313
The main pharmacological constituents of Chinese traditional medicine herb Cnidium monnieri are coumarin compounds and volatile oil. In addition, it contains monoterpene polyols, glucides, as well as recently discovered sesquiterpene components. In recent years, rather active investigations of its anti-tumor were performed at home and abroad. C. monnieri possesses multi-aspect and comprehensive anti-tumor functions, involving directly tumor-inhibitory activity, anti-mutagenicity, reversing multi-drug tolerance of tumor, as well as improving immune functions and so on. In this review, chemical constituents, anti-tumor activities and relevant investigations of Fructus Cnidii were summarized recent decade.
Antineoplastic Agents, Phytogenic
;
pharmacology
;
Cnidium
;
chemistry
;
Coumarins
;
chemistry
;
isolation & purification
;
pharmacology
;
Drugs, Chinese Herbal
;
pharmacology
;
Furocoumarins
;
chemistry
;
isolation & purification
;
pharmacology
;
Molecular Structure

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