1.Design, synthesis and degradation activity of PROTAC targeting SARS-CoV-2 main protease
Lai WEI ; Guoqiang DONG ; Chunquan SHENG
Journal of Pharmaceutical Practice and Service 2025;43(5):235-241
Objective To design and synthesize PROTAC degraders targeting the SARS-CoV-2 main protease (Mpro)based on PROTAC technology. Methods Compound 3w was used as the Mpro ligand, and the indole N atom in the solvent-exposed region was selected as the linker attachment site. A series of Mpro PROTACs were designed and synthesized by conjugating compound 3w with the CRBN ligand pomalidomide through alkane linkers of different lengths. The structures of the target compounds were confirmed by 1H NMR, 13C NMR, and HRMS. Western Blot analysis was employed to evaluate their degradation activity and explore its mechanism in Mpro-HEK-293T cells. Results Four novel Mpro PROTACs(A1-A4)were successfully synthesized. The most potent compound A4 demonstrated Mpro degradation activity with a DC50 value of 5.2 μmol/L, and its degradation mechanism was validated. Conclusion A novel class of Mpro PROTAC degraders were successfully designed and synthesized, and their protein degradation capability and mechanism of action were demonstrated. These results provided lead compounds for the research and development of antiviral degraders against SARS-CoV-2.
3.GPC3-mediated lysosome-targeting chimeras (GLTACs) for targeted degradation of membrane proteins.
Yuxin FANG ; Yaojin ZHU ; Wei WANG ; Zhewei XIA ; Shipeng HE ; Guoqiang DONG ; Chunquan SHENG
Acta Pharmaceutica Sinica B 2025;15(4):2156-2169
Membrane protein degradation is a cutting-edge field in targeted protein degradation (TPD). Herein, we developed glypican-3 (GPC3)-mediated lysosome-targeting chimeras (GLTACs) as a novel strategy for the targeted degradation of tumor-specific membrane proteins. GLTACs utilize tumor-specific expression and endocytosis properties of GPC3 to degrade membrane proteins. By conjugating a GPC3-targeting peptide with the ligand of protein of interest (POI), GLTACs induce the formation of a ternary complex that is internalized into lysosomes, leading to the degradation of the POI. The effectiveness and specificity of GLTACs were validated by designing PD-L1, c-Met, and FGFR1 degraders. In particular, GLTAC WP0 potently degraded PD-L1 and induced T-cell-mediated tumor killing against HepG2 cells, highlighting the potential therapeutic applications. The development of GLTAC technology expands the scope of TPD strategies and opens new avenues for discovering novel therapeutic modalities against challenging protein targets.
4.TRIM21-based degradation strategy for multimeric proteins.
Acta Pharmaceutica Sinica B 2025;15(5):2798-2800
6.Research progress on small-molecule inhibitors of ferroptosis regulatory protein GPX4
Ruxiong LIU ; Wanzhen YANG ; Jie TU ; Chunquan SHENG
Journal of Pharmaceutical Practice and Service 2024;42(9):375-378
Ferroptosis,discovered in 2012,is a newly form of non-apoptotic and non-necrotic cell death,which is characterized by an increasement in lipid peroxidation and accumulation of intracellular iron ions.Glutathione peroxidase 4(GPX4)is the fourth member of the selenoprotein GPx family and plays a crucial role in clearing lipid peroxides in cells,making it an important regulator of ferroptosis.Small molecule inhibitors targeting GPX4 can induce ferroptosis,offering a new strategy for treating drug-resistant cancers and neurodegenerative diseases.The protein structure and function of GPX4 were primarily discusseed,and the latest advances in small molecule inhibitors of GPX4 were summarized,which provided a research foundation for developing ferroptosis inducers based on GPX4 inhibition.
7.Screening and anti-colorectal activity of small molecule inhibitors of Fusobacterium nucleatum
Xuexin BAI ; Yuping CHEN ; Chunquan SHENG ; Shanchao WU
Journal of Pharmaceutical Practice and Service 2024;42(12):503-507
Objective To screen small molecule inhibitors of Fusobacterium nucleatum (Fn) based on commercially available compound libraries, and investigate their anti-colorectal cancer activities under Fn intervention in order to obtain novel anti-colorectal cancer lead compounds. Methods The promotion of colorectal cancer proliferation on organoid was validated by Fn. Secondly, the effects of anti-Fn compounds on their in vitro anticancer activity under Fn’s co-incubation with colorectal cancer HCT116 cell were comparative investigated. Finally, in vivo anticancer efficacy of highly active compounds on nude mouse colon cancer HCT116 transplanted tumor under the intervention of Fn was evaluated by gavage. Results Fn could significantly promote the proliferation of rectal cancer organoids. 9 anti-Fn active compounds could significantly enhance their in vitro anticancer activity under Fn’s co-incubation with HCT116 cells. Methotrexate had the strongest anti-cancer activity with IC50 as 0.03 μmol/L. The combined use of methotrexate (0.5 mg/kg) and PD-1 (5.0 mg/kg) had a stronger anti-tumor effect than their standalone use. Conclusion As new small molecule inhibitor of Fn, methotrexate exhibited good in vitro and in vivo anti-colorectal cancer activity against HCT116 cells and nude mouse xenografts under Fn intervention, which showed the foundation for subsequent structural optimization, and could be expected to expand the new indications of methotrexate.
8.Design, synthesis and degradation activity of BRD4-targeting ATTECs
Journal of Pharmaceutical Practice 2023;41(1):18-25
Objective To design and synthesize autophagic degraders targeting BRD4 based on autophagosome tethering compound (ATTEC) strategy and test their BRD4 degradation activity. Methods BRD4-targeting ATTECs were constructed by conjugating ispinesib that used as a LC3 ligand and JQ1 through a variety of alkane linkers. The final compounds were confirmed by 1H NMR, 13C NMR and ESI-MS, and their degradation activity in different cell lines were tested by Western Blot. Results Five BRD4-ATTEC molecules were successfully synthesized for the first time. Compound 4 showed moderate BRD4 degradation activity in different cell lines. Conclusion The novel BRD4 autophagic degraders were discovered, which expanded the applicability of targeted autophagic degradation via ATTEC.
9.Advances and prospects in targeted protein degradation
Journal of Pharmaceutical Practice 2023;41(6):341-351
Targeted protein degradation (TPD) techniques eliminate pathogenic proteins by hijacking the intracellular proteolysis machinery which includes the ubiquitin-proteasome system (UPS) and the lysosomal degradation pathway, holding promise to overcome the limitations of traditional inhibitors and further broaden the target space including many “undruggable” targets, and provide new targeted treatments for drug discovery. In this review, recent advances in a variety of promising TPD strategies were summarized, such as proteolysis targeting chimera (PROTAC), molecular glue, lysosome-targeting chimaera (LYTAC), autophagosome-tethering compound (ATTEC), autophagy-targeting chimera AUTAC and AUTOTAC, particularly. The representative case studies, potential applications and challenges were analyzed.
10.Controlling antifungal activity with light: Optical regulation of fungal ergosterol biosynthetic pathway with photo-responsive CYP51 inhibitors.
Zhuang LI ; Na LIU ; Wanzhen YANG ; Jie TU ; Yahui HUANG ; Wei WANG ; Chunquan SHENG
Acta Pharmaceutica Sinica B 2023;13(7):3080-3092
Invasive fungal infections (IFIs) have been associated with high mortality, highlighting the urgent need for developing novel antifungal strategies. Herein the first light-responsive antifungal agents were designed by optical control of fungal ergosterol biosynthesis pathway with photocaged triazole lanosterol 14α-demethylase (CYP51) inhibitors. The photocaged triazoles completely shielded the CYP51 inhibition. The content of ergosterol in fungi before photoactivation and after photoactivation was 4.4% and 83.7%, respectively. Importantly, the shielded antifungal activity (MIC80 ≥ 64 μg/mL) could be efficiently recovered (MIC80 = 0.5-8 μg/mL) by light irradiation. The new chemical tools enable optical control of fungal growth arrest, morphological conversion and biofilm formation. The ability for high-precision antifungal treatment was validated by in vivo models. The light-activated compound A1 was comparable to fluconazole in prolonging survival in Galleria mellonella larvae with a median survival of 14 days and reducing fungal burden in the mouse skin infection model. Overall, this study paves the way for precise regulation of antifungal therapy with improved efficacy and safety.

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