1.Construction of an engineered Saccharomyces cerevisiae expressing endoglucanase efficiently.
Yukun WANG ; Sitong ZHANG ; Guang CHEN
Chinese Journal of Biotechnology 2020;36(10):2193-2205
Endoglucanase (EG) is an important component of cellulases and play an important role in cellulose degradation. However, its application is limited due to the low yield of endoglucanase from natural microorganisms. Efficient heterologous expression of endoglucanase is an effective way to solve this problem. To obtain the engineered Saccharomyces cerevisiae for high-yield endoglucanase, endoglucanase gene was cloned from Clostridium cellulovorans, with a total length of 1 996 bp, encoding 440 amino acids, and the complete expression cassette (PαEGC) was constructed with the PGK promoter sequence from Saccharomyces cerevisiae, α-signal peptide sequence from pPIC9K plasmid and CYC1 terminator sequence from pSH65 plasmid by gene splicing by overlap extension PCR (SOE PCR), and the expression vector of endoglucanase in Saccharomyces cerevisiae was constructed by rDNA integration. The relationship between copy number and protein expression was explored. Random multicopy expression of endoglucanase was performed in Saccharomyces cerevisiae. The copy number of endoglucanase was identified by Droplet Digital PCR and explore the relationship between copy number and protein expression.The engineered Saccharomyces cerevisiae of endoglucanase with copy numbers of 1, 3, 4, 7, 9, 11, 15, 16, 19, 21, 22 and 23 were obtained by rDNA integration, respectively. The results showed that when the copy number was 15, the enzyme activity was the highest, namely 351 U/mL. The engineered strain of Saccharomyces cerevisiae for endoglucanase was successfully constructed, which can provide reference for the heterologous expression of other industrial enzymes.
Cellulase/genetics*
;
Genetic Engineering
;
Industrial Microbiology
;
Plasmids/genetics*
;
Saccharomyces cerevisiae/genetics*
2.Display cellulolytic enzymes on Saccharomyces cerevisiae cell surface by using Flo1p as an anchor protein for cellulosic ethanol production.
Chunling MO ; Yueyue YANG ; Ning CHEN ; Xiushan YANG ; Shen TIAN
Chinese Journal of Biotechnology 2014;30(9):1401-1413
In this study, we constructed a yeast consortium surface-display expression system by using Flo1 as an anchor protein. Endoglucanase II (EGII) and cellobiohydrolase II (CBHII) from Trichoderma reesei, and β3-glucosidase 1 (BGLI) from Aspergillus aculeatus were immobilized on Saccharomyces cerevisiae Y5. We constructed the cellulose-displaying expression yeast consortium (Y5/fEGII:Y5/fCBHII:Y5/fBGLI = 1:1:1) and investigated the enzymatic ability and ethanol fermentation. The displayed cellulolytic enzymes was stabile during the 96-h fermentation. The yeast consortium produced 0.77 g/L ethanol from 10 g/L phosphoric acid swollen cellulose (PASC) within 96 h. The yield (in grams of ethanol produced per gram of carbohydrate consumed) was 0.35 g/g, which correspond to 68.6% of the theoretical yield.
Aspergillus
;
enzymology
;
Cellulase
;
genetics
;
Cellulose
;
metabolism
;
Cellulose 1,4-beta-Cellobiosidase
;
genetics
;
Enzymes, Immobilized
;
genetics
;
Ethanol
;
metabolism
;
Fermentation
;
Glucosidases
;
genetics
;
Mannose-Binding Lectins
;
metabolism
;
Protein Binding
;
Saccharomyces cerevisiae
;
genetics
;
metabolism
;
Saccharomyces cerevisiae Proteins
;
metabolism
;
Trichoderma
;
enzymology
3.Molecular engineering of cellulase catalytic domain based on glycoside hydrolase family.
Xiaomei ZHANG ; Dandan LI ; Lushan WANG ; Yue ZHAO ; Guanjun CHEN
Chinese Journal of Biotechnology 2013;29(4):422-433
Molecular engineering of cellulases can improve enzymatic activity and efficiency. Recently, the Carbohydrate-Active enZYmes Database (CAZy), including glycoside hydrolase (GH) families, has been established with the development of Omics and structural measurement technologies. Molecular engineering based on GH families can obviously decrease the probing space of target sequences and structures, and increase the odds of experimental success. Besides, the study of cellulase active-site architecture paves the way toward the explanation of catalytic mechanism. This review focuses on the main GH families and the latest progresses in molecular engineering of catalytic domain. Based on the combination of analysis of a large amount of data in the same GH family and their conservative active-site architecture information, rational design will be an important direction for molecular engineering and promote the rapid development of the conversion of biomass.
Catalytic Domain
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genetics
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Cellulase
;
chemistry
;
genetics
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Directed Molecular Evolution
;
methods
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Evolution, Molecular
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Glycoside Hydrolases
;
chemistry
;
genetics
;
Protein Engineering
;
methods
4.Enhanced cellulase production of Penicillium decumbens by knocking out CreB encoding a deubiquitination enzyme.
Guangqi ZHOU ; Jing LÜ ; Zhonghai LI ; Jingjing LI ; Mingyu WANG ; Yinbo QU ; Lin XIAO ; Shulin QIN ; Haitao ZHAO ; Ruirui XIA ; Xu FANG
Chinese Journal of Biotechnology 2012;28(8):959-972
Penicillium decumbens T. is an important filamentous fungus for the production of cellulases to effectively degrade lignocellulose for second generation biofuel production. In order to enhance the capability of Penicillium decumbens to produce cellulases, we constructed a creB (a deubiquitinating enzyme encoding gene) deletion cassette, and generated a creB knockout strain with homologous double crossover recombination. This mutation resulted in a detectable decrease of carbon catabolite repression (CCR) effect. The filter paper activity, endoglucanase activity, xylanase activity and exoglucanase activity of the deltacreB strain increased by 1.8, 1.71, 2.06 and 2.04 fold, respectively, when comparing with the parent strain Ku-39. A 2.68 fold increase of extracellular protein concentration was also observed. These results suggest that the deletion of creB results in CCR derepression. These data also suggest that CREB influences cellulase production of Penicillium decumbens. In generation, this study provides information that can be helpful for constructing cellulase hyper-producing strain.
Cellulase
;
biosynthesis
;
Endopeptidases
;
genetics
;
metabolism
;
Gene Knockout Techniques
;
Lignin
;
metabolism
;
Mutant Proteins
;
metabolism
;
Penicillium
;
enzymology
;
genetics
;
Recombination, Genetic
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Ubiquitinated Proteins
;
genetics
;
Ubiquitination
5.Construction of a Pichia pastoris recombinant strain capable of over-expressing phytase and endoglucanase.
Zhenfang WU ; Zizhong TANG ; Hui CHEN ; Xueyi HAN ; Xin LAI ; Qi WU
Chinese Journal of Biotechnology 2010;26(5):616-622
Both phytase and endoglucanase are additives in feed for mono-gastric animal known for their effects. Recombinant vector pPICZalpha-EG was constructed and transformed to GS115-phyA, a Pichia pastoris strain that had integrated with phytase gene, generating GS115-phyA-EG. Both phytase and endoglucanase activities in the supernatant were determined after methanol induction of GS115-phyA-EG. Phytase and endoglucanase activity reached 39.4% and 56.2% activity compared to GS115-phyA and GS115-EG, respectively. Properties of the mixed enzyme suggest that the optimal temperature and pH value be 55 degrees C and 5.5 respectively. Both phytase and endoglucanase showed greater than 80% activity across temperature ranges 45 degrees C to 55 degrees C and pH ranges 4.5 to 5.5. Expressing more than one enzyme in one system could save time and money during induced expression, and the mixed enzyme might apply for treating forge before feeding with poultry.
6-Phytase
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biosynthesis
;
genetics
;
Cellulase
;
biosynthesis
;
genetics
;
Genetic Vectors
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Pichia
;
enzymology
;
genetics
;
Recombinant Proteins
;
biosynthesis
;
genetics
6.Synergistic systems for biodegradations of lignocellulose in microorganisms: a review.
Chaoning LIANG ; Yanfen XUE ; Yanhe MA
Chinese Journal of Biotechnology 2010;26(10):1327-1332
Lignocellulose is the most abundant natural biomass. Bioconversion of lignocelluloses becomes a bottleneck for biorefinery, because of its complex structures and heterogeneous composition. Besides screening or engineering approach for single free enzymes with improved properties, an alternative approach is to study synergistic pattern with hydrolysis systems or mimic natural cellulosome for better performance in cellulolytic substrate degradation. Besides, bacterial co-cultures provide another synergistic cellulolytic system. Engineered strains with modified metabolic network could facilitate consolidated bioprocess by increasing yields as well as reducing costs.
Bacteria
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genetics
;
metabolism
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Biomass
;
Cellulase
;
genetics
;
metabolism
;
Cellulosomes
;
genetics
;
metabolism
;
Enzymes
;
metabolism
;
Fermentation
;
Lignin
;
metabolism
;
Metabolic Networks and Pathways
7.Saturation mutagenesis of three amino acid positions consisting of the active site of an endoglucanase from termite Coptotermes formosanus.
Lihua LIN ; Guomei QIN ; Yutuo WEI ; Liqin DU ; Zongwen PANG ; Ribo HUANG
Chinese Journal of Biotechnology 2009;25(6):927-931
Functional improvement to one component of the cellulase, endo-beta-1, 4-glucanase, has been a focus of the recent research in this area. We report here the saturation mutagenesis of the active site of an endoglucanase (CfEG) from termite Coptotermes formosanus. First, three dimensional structure of CfEG was built via homology modeling by using a close-related (79% homology in sequence) endo-beta-1,4-glucanase (NtEG PDB id = 1ks8) from higher termite Nasutitermes takasagoensis as a template. Second, we identified three corresponding amino acid positions at the active site of CfEG by structural superposition onto NtEG. These three putative amino acids for the active site of CfEG, i.e., Asp53, Asp56 and Glu411, were subjected to saturation mutagenesis using degenerate primers. Among the mutants, Asp53Glu and Asp56Cys showed somewhow higher activities than the wildtype, with the latter having more than 3-fold decrease in Km. Double mutation Asp53Leu/Asp56IIe showed nearly 2-fold increase in specific activity and in the same time 2-fold decrease in Km. Saturation mutagenesis to the position Glu411 produced no active mutant, even changing Glu411 explicitly into its similar amino acids such as Glu411Asp and Glu411Gln could not result in any active mutant. These imply that position Glu411 could be extremely important and therefore indispensable for CfEG functionality.
Amino Acids
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genetics
;
Animals
;
Cellulase
;
chemistry
;
genetics
;
metabolism
;
Isoptera
;
enzymology
;
Mutagenesis, Site-Directed
;
Mutation
8.Cloning and functional analysis of two regulators involved in regulation of cellulase formation in Trichoderma koningii.
Min LING ; Yongling QIN ; Nan LI ; Zhiqun LIANG
Chinese Journal of Biotechnology 2008;24(10):1808-1812
ACEI and Xyr1 are two regulators that potentially involve in regulation of cellulases and xylanases formation in Trichoderma reesei, they compete for a binding site in the xyn1 (Xylanase1-encoding) gene promoter. To further investigate the mechanism for the transcriptional regulation of cellulases, DNA-binding domains of both ACEI and Xyr1 in T. Koningii were expressed from E. coli. They both showed bindings to the cbh1 promoter fragment (-304 bp to -18 bp) by electrophoresis mobility shift assays, suggesting ACEI and Xyr1 not only compete for binding to xyn1 promoter but also to cbh1 promoter.
Binding Sites
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Cellulase
;
biosynthesis
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Endo-1,4-beta Xylanases
;
genetics
;
metabolism
;
Escherichia coli
;
genetics
;
metabolism
;
Gene Expression Regulation, Enzymologic
;
Gene Expression Regulation, Fungal
;
Promoter Regions, Genetic
;
Trans-Activators
;
genetics
;
metabolism
;
Trichoderma
;
enzymology
;
genetics
9.High-level production of neutral endoglucanase 1 in Pichia pastoris.
Shao-Jun DING ; Mei-Jing SONG ; Hong-Jun YANG ; Zeng-Tao XING ; Rui ZHOU ; Jie CAO
Chinese Journal of Biotechnology 2006;22(1):71-76
The gene (eg1) encoding for novel endoglucanase 1 was cloned previously from Chinese straw mushroom Volvariella volvacea. EG1 has high thermal stability and optimal pH at neutral and shows great potential in textile and paper industry applications. To improve the expression level of EG1 in Pichia pastoris, the increasing copy number of clone, and its high cell density fermentation in 3.2L fermenter for its high-level expression were investigated in this work. By electro-transformation of pPICZalphaB-egl into GS115EG11 integrated with single copy of eg1 gene, A resistant transformant with 3.8 times higher level expression than GS115EG11 was screened from YPDSZ plate containing 2000 microg/mL of Zeocin. The effect of initial cell density, pH and methanol on its expression and biomass accumulation was evaluated in shaking culture. Optimal EG1 production was observed when initial cell density OD600 was 5.0. EG1 production and biomass accumulation did not seem to vary when cells were induced at different pH values. Both of EG1 and cell density were found to increase with higher methanol concentrations, reaching 62.48 IU/mL and 31.7 (OD600) respectively after 120 h induction with 2.0% (V/V) methanol compared to 30.24 IU/mL and 17.79 (OD60) with 0.25% methanol induction. EG1 expression was further increased by 6.4 times higher than shaking culture after 95.5 hours induction with methanol in fed-batch fermentation, so totally 34 times higher than that for GS115EG11 was achieved by screening of high Zeocin resistant clone and high cell density fermentation. The production of EG1 with 543.36IU/mL CMC activity and 8.80mg/mL protein expression was obtained in Pichia pastoris.
Cellulase
;
biosynthesis
;
genetics
;
Cloning, Molecular
;
Culture Media
;
Electroporation
;
Escherichia coli
;
genetics
;
metabolism
;
Fermentation
;
Fungal Proteins
;
biosynthesis
;
genetics
;
Pichia
;
genetics
;
metabolism
;
Volvariella
;
enzymology
;
genetics
10.Construction and screening of phage display single chain antibody library against Bursaphelenchus xylophilus cellulase.
Wang TIAN ; Qi ZHANG ; Wen-Bo YANG ; Gang BAI
Chinese Journal of Biotechnology 2005;21(6):900-905
A phage display single-chain variable fragment (scFv) library against Bursaphelenchus xylophilus cellulase (BXC) was constructed and used to screen the specific antibodies binding to BXC. The total RNA was extracted from fresh spleens of BALB/C mice immunized with BXC. Gene fragments encoding VH and VL were amplified by RT-PCR and assembled into a single chain by overlapping PCR with a linker DNA encoding the peptide (Gly4Ser)3. The recombinant fragments were cloned into the phagemids (pCANTABSE) and electroporated into E. coli TG1. The recombinant phagemids were rescued by reinfection of helper phage M13K07. The repertoire of the phage display antibody was about 5 x 10(4). The specific antibodies against BXC were obtained after five rounds of affinity selection. The positive phage clone was used to infect E. coli HB2151. SDS-PAGE and western blot analysis showed that the soluble scFv antibodies expressed bound specifically to BXC. The studies laid foundation for quarantine and pathological study of Bursaphelenchus xylophilu.
Animals
;
Cellulase
;
genetics
;
immunology
;
Cloning, Molecular
;
Electroporation
;
Escherichia coli
;
genetics
;
metabolism
;
Female
;
Helminth Proteins
;
genetics
;
immunology
;
Immunoglobulin Variable Region
;
genetics
;
Mice
;
Mice, Inbred BALB C
;
Nematoda
;
enzymology
;
Peptide Library
;
Pinus
;
parasitology
;
Plant Diseases
;
parasitology
;
Recombinant Proteins
;
biosynthesis
;
genetics

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