1.Gene expression-based machine learning model for diagnosis, prognosis, and treatment response prediction in hepatocellular carcinoma: a retrospective study
Tan Thinh NGUYEN ; Thanh Dat NGUYEN ; Phu Qui Le NGUYEN ; Phuong Thi BUI ; Minh Nam NGUYEN
Journal of Yeungnam Medical Science 2026;43(1):21-
Background:
Hepatocellular carcinoma (HCC) remains a leading cause of cancer-related mortality worldwide, largely because of challenges in early diagnosis and the limited sensitivity of conventional biomarkers. Therefore, reliable molecular tools for early detection, prognostic stratification, and individualized treatment predictions are urgently required.
Methods:
This retrospective study analyzed publicly available gene expression datasets. Candidate biomarkers were identified from the GSE14520 cohort using a multistep screening workflow that integrated differential expression analysis, diagnostic performance, and prognostic relevance. A 10-gene diagnostic model was constructed using least absolute shrinkage and selection operator logistic regression and subsequently validated across multiple independent cohorts. Survival outcomes were evaluated using the Kaplan-Meier analysis and treatment responses to sorafenib and transarterial chemoembolization (TACE) were assessed using receiver operating characteristic analysis.
Results:
A 10-gene signature (TOP2A, CDK1, CYP3A4, MASP2, EPHX2, HAO1, RACGAP1, GLYAT, ADH1B, and CYP4A11) was established. The model demonstrated robust internal performance and consistent accuracy across external validation cohorts (area under the curve [AUC], >0.9). This signature effectively identified early-stage HCC and distinguished malignancy from cirrhosis. High-risk scores were significantly associated with poor overall survival and recurrence-free survival (p<0.05). Furthermore, the model could predict treatment sensitivity, with higher risk scores associated with better outcomes for sorafenib (AUC, 0.791), whereas lower risk scores correlated with an improved response to TACE (AUC, 0.768).
Conclusion
Our gene expression-based machine learning model provides a robust tool for HCC diagnosis, prognosis, and treatment response prediction, with potential as a supportive system for personalized clinical decision-making.
2.Factors associating with nutritional status among adults with Beta-Thalassemia Major
Hoang Thi Ngoc Anh ; Dinh Thi Thu Trang ; Pham Van Thao ; Ha Tu Phuong ; Nguyen Tien Vu ; Pham Thi Ngoc Huyen ; Bui Thi Mai An
Vietnam Journal of Public Health 2025;11(1):4-
Background: Patients with beta-thalassemia major are susceptible to malnutrition, yet limited evidence exists in Vietnam. This study aims to identify factors associated with underweight status among adults with beta-thalassemia major in Vietnam.
Methods: This cross-sectional study included 201 adults (≥18 years) with beta-thalassemia major. Underweight was defined as BMI < 18.5 kg/m². Logistic regression was used to examine factors associated with underweight status, including age, sex, ethnicity, place of residence, educational level, marital status, and employment status.
Results: Over half of the participants (54.2%) were underweight. Female (aOR = 0.30, 95% CI: 0.12–0.73, p-value=0.008) and married patients (aOR = 0.32, 95% CI: 0.13–0.79, p-value=0.013) were significantly associated with lower odds of underweight status compared to male and unmarried counterparts. Underweight patients had significantly lower fat mass, muscle mass, and bone mineral content, but higher total body water percentage compared to those with normal weight.
Conclusion: Underweight status is highly prevalent among adults with beta-thalassemia major in Vietnam, particularly among males and unmarried individuals. These findings underscore the need for targeted nutritional and psychosocial support strategies to improve care and quality of life for this vulnerable population. We recommend implementing tailored nutritional interventions to improve their nutritional status.
3.Prevalence of Depression, anxiety and stress among the adolescents and associated factors: A Scoping review
Pham Phuong Mai ; Tran Thi Le Hang ; Pham Mai Oanh ; Bui Quang Tien Tien ; Pham Hoang Ha
Vietnam Journal of Public Health 2025;11(1):5-
Background: Depression, anxiety, and stress have become major public health concerns among adolescents, particularly in the aftermath of the COVID-19 pandemic. Understanding their prevalence and determinants is essential to inform prevention and intervention strategies.
Objectives: To describe the prevalence and associated factors of depression, anxiety, and stress among adolescents from 2022 to 2023.
Methods: This is a scoping review. We synthesize scientific studies on depression, anxiety, stress in adolescents aged 10-24 years published in journals from three data bases: PubMed, Cochrane, Embase.
Results: A total of 34 studies on depression, anxiety, and stress in adolescents were included in the review. This scoping review indicates that prevalence of depression ranged from 12.5% to 90.9%, that of anxiety was between 15.2% and 74.7%, and that of stress ranged from 3.2% to 75.3%. The mean age of participants across studies ranged from 14.5 to 21.9 years. Several factors have been identified in different studies as exacerbating these symptoms among adolescents, including age, gender, education related factors, family background, and risk behaviors.
Conclusion: The findings of this review provide valuable insights for parents and health professionals to design effective strategies that mitigate mental health symptoms and foster adolescents’ healthy development.
4.Clinical and molecular characteristics of simple virilizing congenital adrenal hyperplasia due to 21-hydroxylase deficiency: insight from a tertiary pediatric center in Vietnam
Khanh Ngoc NGUYEN ; Giang Thi Kim DANG ; Ngoc Thi Bich CAN ; Dien Minh TRAN ; Thao Phuong BUI ; Mai Nguyen Thi PHUONG ; Huong Thu PHAM ; Ngoc Diem NGO ; Dung Chi VU
Annals of Pediatric Endocrinology & Metabolism 2025;30(6):330-339
Purpose:
Simple virilizing congenital adrenal hyperplasia (SV-CAH) due to 21-hydroxylase deficiency (21-OHD) is an autosomal recessive disease caused by pathogenic variants of the CYP21A2 gene. Children with SV-CAH often experience delayed diagnosis, presenting with pseudo-precocious puberty in males and genital virilization in females. Genotyping is essential for diagnosis, treatment, optimization, and phenotype prediction. This study describes the clinical and genetic characteristics of SV-CAH to guide treatment strategies.
Methods:
From November 2016 to March 2023, 79 children (accounting for 34.3% of 230 CAH cases in the overall children’s cohort) from 75 families were classified as SV-CAH due to 21-OHD at the Vietnam National Children's Hospital. Forty-three children underwent CYP21A2 mutation analysis using multiplex ligation-dependent probe amplification and complete gene sequencing to detect pathogenic variants.
Results:
Median age at diagnosis was 4.5 years (interquartile range, 1 day–22.3 years). There were 38.0% males and 62.0% females. The most common symptoms were penile enlargement in males (53.3%) and clitoromegaly (87.8%) in females; the height standard deviation (SD) at diagnosis was 1.90±1.79 SD (-2.02 to 5.43) according to the World Health Organization; and bone age advancement was 4.65±2.59 years. Genetic analysis identified 21 pathogenic variants and 22 genotypes in 43 children. The most common variant was p.I173N (47.7%); the most common genotype was p.I173N/p.I173N (16.3%).
Conclusion
Children with SV-CAH are often diagnosed late. To avoid that, early genetic analysis should be prioritized, especially for children diagnosed through newborn screening programs. Determining the genotype is crucial for optimizing treatment strategies, ensuring personalized management, and avoiding overtreatment.
5.In Vitro Evaluation of the Anti-Proliferative and Anti-Diabetic Activities of Streptocaulon juventas Leaf Extracts
Tran Nhat MAI ; Bui Thi PHUONG ; Tran Thi HUYEN ; Nguyen Minh NAM
Natural Product Sciences 2025;31(4):278-283
Streptocaulon juventas, a medicinal plant traditionally used in Vietnam and other Southeast Asian countries, has been previously investigated for certain biological activities of its roots; however, studies on its leaves remain limited. In this study, leaf extracts were evaluated for their in vitro anti-proliferative activity against B16F10 (murine melanoma) and HepG2 (human hepatocellular carcinoma) cell lines, as well as for their αglucosidase inhibitory potential. MTT assays revealed that the hexane (Sj-Hx) and dichloromethane (Sj-DCM) fractions exhibited the strongest cytotoxic effects on B16F10 cells, with IC₅₀ values of 36.09 µg/mL and 45.91 µg/mL, respectively. The hexane fraction (Sj-Hx) also demonstrated potent activity against HepG2 cells, with an IC50 value of 36.65 µg/mL. Notably, none of the extracts exhibited cytotoxicity toward Hs68 normal human fibroblasts, indicating favorable selectivity. DAPI staining further confirmed that both Sj-Hx and Sj-DCM induced nuclear fragmentation and chromatin condensation, consistent with apoptosis induction. Additionally, in vitro assays of anti-diabetic activity revealed that the hexane (Sj-Hx) and ethyl acetate (Sj-EA) extracts displayed the strongest α-glucosidase inhibition, with IC₅₀ values of 221.59 µg/mL and 265.73 µg/mL, respectively. Collectively, these findings suggest that S. juventas leaf extracts possess selective pro-apoptotic activity against cancer cells and represent a promising natural source for the discovery of anti-diabetic agents.
6.THE RELATIONSHIP BETWEEN DEPRESSION, ANXIETY, STRESS AND INTERNET USE AMONG HIGH SCHOOL STUDENTS
Son Quang Le ; Dieu Thi Thanh Bui ; Duyen Thi Le ; Thao Thi Phuong Nguyen ; Nga Thi Kim Dam
ASEAN Journal of Psychiatry 2024;25(5):1-16
THE RELATIONSHIP BETWEEN DEPRESSION, ANXIETY, STRESS AND INTERNET USE AMONG HIGH SCHOOL STUDENTS
The prevalence of mental health issues among high school students has raised concerns
globally, with depression, anxiety, and stress being common challenges. This study
investigates the relationship between depression, anxiety, stress, and internet use among
high school students in Da Nang, Vietnam. The short Internet Addiction Test (s-IAT) and
Depression Anxiety Stress Scales (DASS-21) were used to assess internet addiction and
mental health symptoms. Data were analyzed using correlation analysis and regression
models. Results revealed significant positive correlations between internet use and
symptoms of stress, anxiety, and depression, highlighting the importance of addressing
problematic internet usage patterns. Additionally, associations were found between
demographic variables, such as parental occupations and socioeconomic status, and
mental health outcomes, emphasizing the interconnected nature of individual, familial,
and societal factors. The study underscores the need for targeted interventions to promote
healthy internet habits and mitigate potential harms among high school students. By
understanding the complex interplay between internet use and mental health outcomes,
stakeholders can develop effective strategies to support the well-being of adolescents in
an increasingly digital world. This research contributes to a deeper understanding of the
socio-ecological factors shaping adolescent mental health and informs future intervention
efforts. ASEAN Journal of Psychiatry, Vol. 25 (6) June, 2024; 1-16.
7.Efonidipine Inhibits JNK and NF-κB Pathway to Attenuate Inflammation and Cell Migration Induced by Lipopolysaccharide in Microglial Cells
Ngoc Minh NGUYEN ; Men Thi Hoai DUONG ; Phuong Linh NGUYEN ; Bich Phuong BUI ; Hee-Chul AHN ; Jungsook CHO
Biomolecules & Therapeutics 2022;30(5):455-464
Efonidipine, a calcium channel blocker, is widely used for the treatment of hypertension and cardiovascular diseases. In our preliminary study using structure-based virtual screening, efonidipine was identified as a potential inhibitor of c-Jun N-terminal kinase 3 (JNK3). Although its antihypertensive effect is widely known, the role of efonidipine in the central nervous system has remained elusive. The present study investigated the effects of efonidipine on the inflammation and cell migration induced by lipopolysaccharide (LPS) using murine BV2 and human HMC3 microglial cell lines and elucidated signaling molecules mediating its effects. We found that the phosphorylations of JNK and its downstream molecule c-Jun in LPS-treated BV2 cells were declined by efonidipine, confirming the finding from virtual screening. In addition, efonidipine inhibited the LPS-induced production of pro-inflammatory factors, including interleukin-1β (IL-1β) and nitric oxide. Similarly, the IL-1β production in LPS-treated HMC3 cells was also inhibited by efonidipine. Efonidipine markedly impeded cell migration stimulated by LPS in both cells. Furthermore, it inhibited the phosphorylation of inhibitor kappa B, thereby suppressing nuclear translocation of nuclear factor-κB (NF-κB) in LPS-treated BV2 cells. Taken together, efonidipine exerts anti-inflammatory and anti-migratory effects in LPS-treated microglial cells through inhibition of the JNK/NF-κB pathway. These findings imply that efonidipine may be a potential candidate for drug repositioning, with beneficial impacts on brain disorders associated with neuroinflammation.
8.Chemicals from Cimicifuga dahurica and Their Inhibitory Effects on Pro-inflammatory Cytokine Production by LPS-stimulated Bone Marrow-derived Dendritic Cells
Nguyen Phuong THAO ; Young Suk LEE ; Bui Thi Thuy LUYEN ; Ha Van OANH ; Irshad ALI ; Madeeha AROOJ ; Young Sang KOH ; Seo Young YANG ; Young Ho KIM
Natural Product Sciences 2018;24(3):194-198
Inflammation is a biological response caused by overactivation of the immune system and is controlled by immune cells via a variety of cytokines. The overproduction of pro-inflammatory cytokines enhances abnormal host immunity, resulting in diseases such as rheumatoid arthritis, cardiovascular disease, Alzheimer's disease, and cancer. Inhibiting the production of pro-inflammatory cytokines such as interleukin (IL)-12p40, IL-6, and tumor necrosis factor (TNF)-α might be one way to treat these conditions. Here, we investigated the anti-inflammatory activity of compounds isolated from Cimicifuga dahurica (Turcz.) Maxim., which is traditionally used as an antipyretic and analgesic in Korea. In primary cell culture assays, 12 compounds were found to inhibit the production of pro-inflammatory cytokines (IL-12p40, IL-6, and TNF-α) in vitro in bone marrow-derived dendritic cells stimulated with LPS.
Alzheimer Disease
;
Arthritis, Rheumatoid
;
Cardiovascular Diseases
;
Cimicifuga
;
Cytokines
;
Dendritic Cells
;
Immune System
;
In Vitro Techniques
;
Inflammation
;
Interleukin-6
;
Interleukins
;
Korea
;
Primary Cell Culture
;
Ranunculaceae
;
Tumor Necrosis Factor-alpha
9.Anti-osteoporotic and Antioxidant Activities by Rhizomes of Kaempferia parviflora Wall. ex Baker.
Nguyen Phuong THAO ; Bui Thi Thuy LUYEN ; Sang Hyun LEE ; Hae Dong JANG ; Young Ho KIM
Natural Product Sciences 2016;22(1):13-19
In this report, we investigated the antioxidant (peroxyl radical-scavenging and reducing capacities) and anti-osteoporotic activities of extracts and isolated constituents (1 - 16) from the rhizomes of Kaempferia parviflora Wall. ex Baker on pre-osteoclastic RAW 264.7 cells. Compound 5 exhibited significant peroxyl radical-scavenging capacity, with TE value of 8.47 ± 0.52 µM, while compound 13 showed significant reducing capacity, with CUPRAC value of 5.66 ± 0.26 µM, at 10.0 µM. In addition, flavonoid compounds 2, 4, 6, 8, 10, 12, and terpene compound 15 showed significant inhibition of tartrate-resistant acid phosphatase (TRAP) in NF-κB ligand-induced osteoclastic RAW 264.7 cells, with values ranging from 16.97 ± 1.02 to 64.67 ± 2.76%. These results indicated that K. parviflora could be excellent sources for the antioxidant and anti-osteoporotic traditional medicinal plants.
Acid Phosphatase
;
Osteoclasts
;
Plants, Medicinal
;
Rhizome*
;
Zingiberaceae*
10. Mechanism of Japanese encephalitis virus genotypes replacement based on human, porcine and mosquito-originated cell lines model
Loan Phuong DO ; Trang Minh BUI ; Nga Thi PHAN
Asian Pacific Journal of Tropical Medicine 2016;9(4):333-336
Objective: To examine the multiplication efficiency Japanese encephalitis virus (JEV) genotype I (GI) and genotype III (GIII) of different cell lines which originated from human, porcine, mosquitoes in order to prove mechanism of JEV GI replacement JEV GIII since it emerging in nature recent decades. Methods: The mixture of GI and GIII JEV isolates was inoculated on human rhabdomyosarcoma (RD), pig kidney epithelial (PS) and Aedes albopictus C6/36 clone (C6/36) which originated from human, porcine and mosquitoes, respectively. Plaque assays were performed to calculate virus titer and real-time RT-PCR with GI and GIII specific primer sets to quantify the number of GI and GIII RNA copies. Results: The highest virus titer reached at the 3rd day of post infection when GI and GIII mixture was inoculated on RD and PS and that of C6/36 was at the 4th day. JEVs were amplified and maintained by C6/36 cells after 10 passages whereas that by RD and PS only limited within 8 and 6 passages, respectively. GI strain amplified and maintained more efficiently on C6/36 and PS but not RD, whereas GIII strain amplified and maintained more efficiently on RD. Conclusions: There is a correlation between the multiplication efficiency of GI and GIII JEV strains when these two genotype strains co-infected on different cell lines with the predominance of GI strains in C6/36 and PS and the limited detection of GI strains in RD cells proving a possible mechanism of shift JEV genotypes in nature recent decades since GI emerging.


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