1.In Silico Screening of Natural Products as Potential Inhibitors of SARS-CoV-2 Using Molecular Docking Simulation.
Rajib HOSSAIN ; Chandan SARKAR ; Shardar Mohammad Hafiz HASSAN ; Rasel Ahmed KHAN ; Mohammad ARMAN ; Pranta RAY ; Muhammad Torequl ISLAM ; Sevgi Durna DAŞTAN ; Javad SHARIFI-RAD ; Zainab M ALMARHOON ; Miquel MARTORELL ; William N SETZER ; Daniela CALINA
Chinese journal of integrative medicine 2022;28(3):249-256
OBJECTIVE:
To explore potential natural products against severe acute respiratory syndrome coronavirus (SARS-CoV-2) via the study of structural and non-structural proteins of human coronaviruses.
METHODS:
In this study, we performed an in-silico survey of 25 potential natural compounds acting against SARS-CoV-2. Molecular docking studies were carried out using compounds against 3-chymotrypsin-like protease (3CLPRO), papain-like protease (PLPRO), RNA-dependent RNA polymerase (RdRp), non-structural protein (nsp), human angiotensin converting enzyme 2 receptor (hACE2R), spike glycoprotein (S protein), abelson murine leukemia viral oncogene homolog 1 (ABL1), calcineurin-nuclear factor of activated T-cells (NFAT) and transmembrane protease serine 2.
RESULTS:
Among the screened compounds, amentoflavone showed the best binding affinity with the 3CLPRO, RdRp, nsp13, nsp15, hACE2R. ABL1 and calcineurin-NFAT; berbamine with hACE2R and ABL1; cepharanthine with nsp10, nsp14, nsp16, S protein and ABL1; glucogallin with nsp15; and papyriflavonol A with PLPRO protein. Other good interacting compounds were juglanin, betulinic acid, betulonic acid, broussooflavan A, tomentin A, B and E, 7-methoxycryptopleurine, aloe emodin, quercetin, tanshinone I, tylophorine and furruginol, which also showed excellent binding affinity towards a number of target proteins. Most of these compounds showed better binding affinities towards the target proteins than the standard drugs used in this study.
CONCLUSION
Natural products or their derivatives may be one of the potential targets to fight against SARS-CoV-2.
Animals
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Antiviral Agents/therapeutic use*
;
Biological Products/pharmacology*
;
COVID-19/drug therapy*
;
Humans
;
Mice
;
Molecular Docking Simulation
;
SARS-CoV-2
2.Roles of integrin in tumor development and the target inhibitors.
Zhao-He LI ; You ZHOU ; You-Xiang DING ; Qing-Long GUO ; Li ZHAO
Chinese Journal of Natural Medicines (English Ed.) 2019;17(4):241-251
Integrin is a large family of cell adhesion molecules (CAMs) which involves in the interaction of cells/cells and cells/ extracellular matrix (ECM) to mediate cell proliferation, differentiation, adhesion, migration, etc. In recent years, aberrant expression of integrin has been clearly found in many tumor studies, indicating that integrin is closely related to tumor formation and development. Meanwhile, it has effects on tumor cell differentiation, cell migration, proliferation and tumor neovascularization. The study of drugs targeting integrins is of great significance for the clinical treatment of tumors. Because of its important role in tumorigenesis and development, integrin has become a promising target for the treatment of cancer. This review summarizes the role of integrin in tumor development and the current state of integrin inhibitors to provide a valuable reference for subsequent research.
Antineoplastic Agents
;
pharmacology
;
therapeutic use
;
Biological Products
;
pharmacology
;
therapeutic use
;
Cell Movement
;
drug effects
;
Cell Proliferation
;
drug effects
;
Extracellular Matrix
;
metabolism
;
Humans
;
Integrins
;
antagonists & inhibitors
;
classification
;
genetics
;
metabolism
;
Neoplasms
;
drug therapy
;
pathology
;
Neovascularization, Pathologic
;
drug therapy
;
pathology
;
Signal Transduction
;
drug effects
3.Potential protective effects of red yeast rice in endothelial function against atherosclerotic cardiovascular disease.
Shu-Jun FENG ; Zhi-Han TANG ; Ying WANG ; Xin-Ying TANG ; Tao-Hua LI ; Wei TANG ; Ze-Min KUANG
Chinese Journal of Natural Medicines (English Ed.) 2019;17(1):50-58
Atherosclerotic cardiovascular disease (ASCVD) is the deadliest disease in the world, with endothelial injury occurring throughout the course of the disease. Therefore, improvement in endothelial function is of essential importance in the prevention of ASCVD. Red yeast rice (RYR), a healthy traditional Chinese food, has a lipid modulation function and also plays a vital role in the improvement of endothelial reactivity and cardiovascular protection; thus, it is significant in the prevention and treatment of ASCVD. This article reviews the molecular mechanisms of RYR and its related products in the improvement of endothelial function in terms of endothelial reactivity, anti-apoptosis of endothelial progenitor cells, oxidative stress alleviation and anti-inflammation.
Apoptosis
;
drug effects
;
Atherosclerosis
;
pathology
;
physiopathology
;
prevention & control
;
Biological Products
;
chemistry
;
pharmacology
;
therapeutic use
;
Cardiovascular Diseases
;
pathology
;
physiopathology
;
prevention & control
;
Drugs, Chinese Herbal
;
chemistry
;
pharmacology
;
therapeutic use
;
Endothelium, Vascular
;
cytology
;
drug effects
;
physiology
;
Humans
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Inflammation
;
prevention & control
;
Lipid Metabolism
;
drug effects
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Oxidative Stress
;
drug effects
4.Secondary metabolites of petri-dish cultured Antrodia camphorata and their hepatoprotective activities against alcohol-induced liver injury in mice.
Yu WU ; Wen-Jing TIAN ; Shuo GAO ; Zu-Jian LIAO ; Guang-Hui WANG ; Jir-Mehng LO ; Pei-Hsin LIN ; De-Quan ZENG ; Da-Ren QIU ; Xiang-Zhong LIU ; Mi ZHOU ; Ting LIN ; Hai-Feng CHEN
Chinese Journal of Natural Medicines (English Ed.) 2019;17(1):33-42
Antrodia camphorata, a well-known and highly valued edible medicinal mushroom with intriguing activities like liver protection, has been traditionally used for the treatment of alcoholic liver disease. A. camphorata shows highly medicinal and commercial values with the demand far exceeds the available supply. Thus, the petri-dish cultured A. camphorata (PDCA) is expected to develope as a substitute. In this paper, nineteen triterpenes were isolated from PDCA, and thirteen of them were the unique anthroic acids in A. camphorata, including the main content antcin K, which suggested that PDCA produced a large array of the same anthroic acids as the wild one. Furthermore, no obvious acute toxicity was found suggesting the edible safety of PDCA. In mice alcohol-induced liver injury model, triglyceride (TG), aspartate aminotransferase (AST), alanine aminotransferase (ALT), and malondialdehyde (MDA) had been reduced by the PDCA powder as well as the main content antcin K, which indicated that the PDCA could protect alcoholic liver injury in mice model and antcin K could be the effective component responsible for the hepatoprotective activities of PDCA against alcoholic liver diseases.
Alanine Transaminase
;
blood
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Aldehyde Dehydrogenase
;
blood
;
Animals
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Antrodia
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chemistry
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Aspartate Aminotransferases
;
blood
;
Biological Products
;
chemistry
;
pharmacology
;
therapeutic use
;
Chemical and Drug Induced Liver Injury
;
etiology
;
prevention & control
;
Cholestenes
;
chemistry
;
pharmacology
;
therapeutic use
;
Cholesterol, VLDL
;
blood
;
Disease Models, Animal
;
Ethanol
;
toxicity
;
Female
;
Fruiting Bodies, Fungal
;
chemistry
;
Liver
;
drug effects
;
metabolism
;
pathology
;
Liver Diseases, Alcoholic
;
prevention & control
;
Male
;
Malondialdehyde
;
blood
;
Mice
;
Molecular Structure
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Triglycerides
;
blood
;
Triterpenes
;
chemistry
;
pharmacology
;
therapeutic use
5.Therapeutic Benefits of Natural Ingredients for Atopic Dermatitis.
George MAN ; Li-Zhi HU ; Peter M ELIAS ; Mao-Qiang MAN
Chinese journal of integrative medicine 2018;24(4):308-314
Although a variety of regimens are available for the treatment of atopic dermatitis (AD), severe adverse reactions and unpopular costs often limit their usage. In contrast, certain inexpensive, naturally-occurring ingredients are proven effective for AD with fewer side effects. The beneficial effects of these ingredients can be attributed to inhibition of cytokine and chemokine expression, IgE production, inflammatory cell infiltration, histamine release, and/or the enhancement of epidermal permeability barrier function. Since herbal medicines are widely available, inexpensive and generally safe, they could be valuable alternatives for the treatment of AD, particularly for those patients who are not suitable for the utilization of immune modulators. In this review, we summarize the therapeutic benefits of natural ingredients for the treatment of AD and the mechanisms of their actions.
Anti-Inflammatory Agents
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pharmacology
;
therapeutic use
;
Biological Products
;
adverse effects
;
therapeutic use
;
Dermatitis, Atopic
;
drug therapy
;
Humans
;
Permeability
;
Treatment Outcome
6.Interpretation of the updates of NCCN 2017 version 1.0 guideline for colorectal cancer.
Chinese Journal of Gastrointestinal Surgery 2017;20(1):28-33
The NCCN has recently released its 2017 version 1.0 guideline for colorectal cancer. There are several updates from this new version guideline which are believed to change the current clinical practice. Update one, low-dose aspirin is recommended for patients with colorectal cancer after colectomy for secondary chemoprevention. Update two, biological agents are removed from the neoadjuvant treatment regimen for resectable metastatic colorectal cancer (mCRC). This update is based on lack of evidence to support benefits of biological agents including bevacizumab and cetuximab in the neoadjuvant setting. Both technical criteria and prognostic information should be considered for decision-making. Currently biological agents may not be excluded from the neoadjuvant setting for patients with resectable but poor prognostic disease. Update three, panitumumab and cetuximab combination therapy is only recommended for left-sided tumors in the first line therapy. The location of the primary tumor can be both prognostic and predictive in response to EGFR inhibitors in metastatic colorectal cancer. Cetuximab and panitumumab confer little benefit to patients with metastatic colorectal cancer in the primary tumor originated on the right side. On the other hand, EGFR inhibitors provide significant benefit compared with bevacizumab-containing therapy or chemotherapy alone for patients with left primary tumor. Update four, PD-1 immune checkpoint inhibitors including pembrolizumab or nivolumab are recommended as treatment options in patients with metastatic deficient mismatch repair (dMMR) colorectal cancer in second- or third-line therapy. dMMR tumors contain thousands of mutations, which can encode mutant proteins with the potential to be recognized and targeted by the immune system. It has therefore been hypothesized that dMMR tumors may be sensitive to PD-1 inhibitors.
Antibodies, Monoclonal
;
pharmacology
;
therapeutic use
;
Antibodies, Monoclonal, Humanized
;
therapeutic use
;
Antineoplastic Agents
;
therapeutic use
;
Antineoplastic Combined Chemotherapy Protocols
;
therapeutic use
;
Aspirin
;
administration & dosage
;
therapeutic use
;
Bevacizumab
;
therapeutic use
;
Biological Products
;
therapeutic use
;
Brain Neoplasms
;
drug therapy
;
genetics
;
Cetuximab
;
therapeutic use
;
Clinical Decision-Making
;
methods
;
Colorectal Neoplasms
;
drug therapy
;
genetics
;
pathology
;
prevention & control
;
therapy
;
Contraindications
;
Humans
;
Mutation
;
physiology
;
Neoadjuvant Therapy
;
standards
;
Neoplasm Metastasis
;
drug therapy
;
Neoplastic Syndromes, Hereditary
;
drug therapy
;
genetics
;
Practice Guidelines as Topic
;
Prognosis
;
Secondary Prevention
;
methods
;
standards
7.Soft coral Cespitularia stolonifera: New cytotoxic ceramides and gastroprotective activity.
Abdelsamed I ELSHAMY ; Walaa A EL-KASHAK ; Heba M I ABDALLAH ; Abdelrazik H FARRAG ; Mahmoud I NASSAR
Chinese Journal of Natural Medicines (English Ed.) 2017;15(2):105-114
In the present study, a new ceramide, namely 2S, 3R-4E, 8E-2-(heptadecanoylamino)-heptadeca-4, 8-diene-1, 3-diol (1), along with four known steroids, including 24-methylcholesta-5, 24(28)-diene-3β-ol (2), 24-methylcholesta-5, 24(28)-diene-3β-acetate (3), 4-methyl-24-methylcholesta-22-ene-3-ol (4), and cholesterol, was isolated and characterized from CHCl/MeOH extract of Cespitularia stolonifera. A new acetate derivative of compound 1, termed 2S, 3R-4E, 8E-2-(heptadecanoylamino)-heptadeca-4, 8-diene-1, 3-diacetate (1a), was also prepared in the present study. All the structures were established on the basis of modern spectroscopic techniques, including FT-IR, 1D, 2D-NMR, HRESI-MS, and GC-MS, in addition of chemical methods. (-)-Alloaromadendren, ledane, (1)-alloaromadendren oxide, isoaromadendrene epoxide and (-)-caryophellen oxide were identified from the n-hexane fraction using GC-MS. The extract and the two ceramides (1) and (1a) exhibited significant cytotoxic activity against lung cancer A549 cells, while the extract and the two steroids (2) and (3) exhibited significant cytotoxic activity against breast cancer MCF-7 cells. The CHCl/MeOH extract exhibited significant antiulcer activity in both ethanol and acetic acid induced ulcer models in rats, as evidenced by histopathological, histochemical, and biochemical examinations.
A549 Cells
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Acetic Acid
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Animals
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Anthozoa
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chemistry
;
Anti-Ulcer Agents
;
chemistry
;
isolation & purification
;
pharmacology
;
therapeutic use
;
Antineoplastic Agents
;
chemistry
;
isolation & purification
;
pharmacology
;
therapeutic use
;
Biological Products
;
chemistry
;
isolation & purification
;
pharmacology
;
therapeutic use
;
Breast Neoplasms
;
drug therapy
;
Ceramides
;
chemistry
;
isolation & purification
;
pharmacology
;
therapeutic use
;
Disease Models, Animal
;
Ethanol
;
Female
;
Humans
;
Lung Neoplasms
;
drug therapy
;
MCF-7 Cells
;
Magnetic Resonance Spectroscopy
;
methods
;
Rats
;
Spectroscopy, Fourier Transform Infrared
;
methods
;
Steroids
;
chemistry
;
isolation & purification
;
pharmacology
;
therapeutic use
;
Ulcer
;
chemically induced
;
drug therapy
8.Heijiangdan ointment relieves oxidative stress from radiation dermatitis induced by (60)Co γ-ray in mice.
Lin YANG ; Ming-wei YU ; Xiao-min WANG ; Yi ZHANG ; Guo-wang YANG ; Xiao-qin LUO ; Rui-yun PENG ; Ya-bing GAO ; Li ZHAO ; Li-feng WANG
Chinese journal of integrative medicine 2016;22(2):110-115
OBJECTIVETo investigate the effects of Heijiangdan Ointment ( HJD) on oxidative stress in (60)Co γ-ray radiation-induced dermatitis in mice.
METHODSFemale Wistar mice with grade 4 radiation dermatitis induced by (60)Co γ-rays were randomly divided into four groups (n=12 per group); the HJD-treated, recombinant human epidermal growth factor (rhEGF)-treated, Trolox-treated, and untreated groups, along with a negative control group. On the 11th and 21st days after treatment, 6 mice in each group were chosen for evaluation. The levels of superoxide dismutase (SOD), malondialdehyde (MDA), and lactate dehydrogenase (LDH) were detected using spectrophotometric methods. The fibroblast mitochondria were observed by transmission electron microscopy (TEM). The expressions of fibroblast growth factor 2 (FGF-2) and transforming growth factor β1 (TGF-β1) were analyzed by western blot.
RESULTSCompared with the untreated group, the levels of SOD, MDA and LDH, on the 11th and 21st days after treatment showed significant difference (P<0.05). TEM analysis indicated that fibroblast mitochondria in the untreated group exhibited swelling and the cristae appeared fractured, while in the HJD group, the swelling of mitochondria was limited and the rough endoplasmic reticulum appeared more relaxed. The expressions of FGF-2 and TGF-β1 increased in the untreated group compared with the negative control group (P<0.05). After treatment, the expression of FGF-2, rhEGF and Trolox in the HJD group were significantly increased compared with the untreated group (P<0.05), or compared with the negative control group (P<0.05). The expression of TGF-β1 showed significant difference between untreated and negative control groups (P<0.05). HJD and Trolox increased the level of TGF-β1 and the difference was marked as compared with the untreated and negative control groups (P<0.05).
CONCLUSIONHJD relieves oxidative stress-induced injury, increases the antioxidant activity, mitigates the fibroblast mitochondrial damage, up-regulates the expression of growth factor, and promotes mitochondrial repair in mice.
Animals ; Biological Products ; pharmacology ; therapeutic use ; Cell Proliferation ; drug effects ; radiation effects ; Cobalt Radioisotopes ; Dermatitis ; complications ; drug therapy ; pathology ; Drugs, Chinese Herbal ; pharmacology ; therapeutic use ; Female ; Fibroblast Growth Factor 2 ; genetics ; metabolism ; Fibroblasts ; drug effects ; pathology ; radiation effects ; Gamma Rays ; Humans ; L-Lactate Dehydrogenase ; metabolism ; Malondialdehyde ; metabolism ; Mice ; Mitochondria ; drug effects ; metabolism ; radiation effects ; Ointments ; Oxidative Stress ; drug effects ; radiation effects ; Pharmaceutical Preparations ; Radiation Injuries ; complications ; drug therapy ; pathology ; Superoxide Dismutase ; metabolism ; Transforming Growth Factor beta1 ; genetics ; metabolism ; Up-Regulation ; drug effects ; radiation effects
9.Biologic Response of Degenerative Living Human Nucleus Pulposus Cells to Treatment with Cytokines.
Sang Hyun KIM ; Sung Uk KUH ; Keung Nyun KIM ; Jeong Yoon PARK ; Ki Hong CHO ; Dong Kyu CHIN ; Keun Su KIM ; Yong Eun CHO
Yonsei Medical Journal 2015;56(1):277-286
PURPOSE: To investigate the molecular responses of various genes and proteins related to disc degeneration upon treatment with cytokines that affect disc-cell proliferation and phenotype in living human intervertebral discs (IVDs). Responsiveness to these cytokines according to the degree of disc degeneration was also evaluated. MATERIALS AND METHODS: The disc specimens were classified into two groups: group 1 (6 patients) showed mild degeneration of IVDs and group 2 (6 patients) exhibited severe degeneration of IVDs. Gene expression was analyzed after treatment with four cytokines: recombinant human bone morphogenic protein (rhBMP-2), transforming growth factor-beta (TGF-beta), interleukin-1beta (IL-1beta), and tumor necrosis factor-alpha (TNF-alpha). Molecular responses were assessed after exposure of cells from the IVD specimens to these cytokines via real-time polymerase chain reaction and immunofluorescence staining. RESULTS: mRNA gene expression was significantly greater for aggrecan, type I collagen, type II collagen, alkaline phosphatase, osteocalcin, and Sox9 in group 1 than mRNA gene expression in group 2, when the samples were not treated with cytokines. Analysis of mRNA levels for these molecules after morphogen treatment revealed significant increases in both groups, which were much higher in group 1 than in group 2. The average number of IVD cells that were immunofluorescence stained positive for alkaline phosphatase increased after treatment with rhBMP-2 and TGF-beta in group 1. CONCLUSION: The biologic responsiveness to treatment of rhBMP-2, TGF-beta, TNF-alpha, and IL-1beta in the degenerative living human IVD can be different according to the degree of degeneration of the IVD.
Adult
;
Aggrecans/genetics/metabolism
;
Alkaline Phosphatase/genetics/metabolism
;
Biological Products/pharmacology/*therapeutic use
;
Bone Morphogenetic Protein 2/pharmacology/therapeutic use
;
Collagen Type I/genetics/metabolism
;
Collagen Type II/genetics/metabolism
;
Cytokines/*pharmacology/*therapeutic use
;
Female
;
Fluorescent Antibody Technique
;
Gene Expression Regulation/drug effects
;
Humans
;
Interleukin-1/pharmacology/therapeutic use
;
Intervertebral Disc/*drug effects/*pathology
;
Intervertebral Disc Degeneration/*drug therapy/genetics/*pathology
;
Male
;
Middle Aged
;
Osteocalcin/genetics/metabolism
;
RNA, Messenger/genetics/metabolism
;
Recombinant Proteins/pharmacology/therapeutic use
;
SOX9 Transcription Factor/genetics/metabolism
;
Transforming Growth Factor beta/pharmacology/therapeutic use
;
Tumor Necrosis Factor-alpha/pharmacology
10.Recent advances in natural product induced DNA damage response in cancer cells.
Guo-wen REN ; Ya-nan NIU ; Jin-jian LU ; Yi-tao WANG ; Xiu-ping CHEN
China Journal of Chinese Materia Medica 2015;40(24):4797-4804
The DNA structures could be altered or even damaged by exogeous or endogenous factors during cell proliferation. Failure of effective and timely repair will lead to cell cycle arrest or apoptosis. By taking the advantage of the quick proliferation of cancer cells, DNA damage induction, cell cycle arrest and apoptosis promotion have become important strategies for ant-cancer chemotherapy. Previous reports showed that an array of natural compounds inhibit cancer cell proliferation by inducing DNA damage, which have therapeutic potentials for anti-cancer drug research and development.
Animals
;
Biological Products
;
pharmacology
;
therapeutic use
;
DNA Damage
;
Drugs, Chinese Herbal
;
therapeutic use
;
Humans
;
Neoplasms
;
drug therapy

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