1.Detection and analysis of dynamic variant in a pedigree affected with spinocerebellar ataxia type 3.
Chen CHEN ; Xuechao ZHAO ; Xiangdong KONG
Chinese Journal of Medical Genetics 2020;37(12):1364-1367
OBJECTIVE:
To analyze the dynamic variant and clinical subtype of a pedigree affected with spinocerebellar ataxia (SCA) by using fluorescent-labeled primer combined with capillary electrophoresis.
METHODS:
Genomic DNA was extracted from 8 members including 6 patients and 2 healthy individuals from the pedigree. Six pairs of fluorescent-labeled primers were designed to screen pathological variants in association with common subtypes of SCA including SCA1, SCA2, SCA3, SCA6, SCA12 and SCA17.The PCR products were detected by capillary electrophoresis.
RESULTS:
The number of CAG repeats in the SCA3 gene of the proband were determined as 8 and 70, exceeded the normal range(12 to 40), which suggested a diagnosis of SCA3. The other five patients were all detected with abnormal CAG repeats in the SCA3 gene, while the two healthy individuals were determined to be within the normal range.
CONCLUSION
The abnormal expansion of CAG repeats in the SCA3 gene probably underlay the pathogenesis of the disease in this pedigree. Combined fluorescent-labeled primers PCR and capillary electrophoresis can detect dynamic variants among SCA patients with efficiency and accuracy.
Ataxin-3/genetics*
;
Genetic Variation
;
Humans
;
Machado-Joseph Disease/genetics*
;
Pedigree
;
Repressor Proteins/genetics*
;
Trinucleotide Repeats/genetics*
2.Advance in research on spinocerebellar ataxia 2.
Feng JING ; Dan YANG ; Tao CHEN
Chinese Journal of Medical Genetics 2018;35(2):284-287
Spinocerebellar ataxia type 2 (SCA2) is a rare autosomal dominant progressive degenerative disease of the nervous system, which is characterized by a progressive cerebellar syndrome associated with saccadic eye scan, peripheral neuropathy, cognitive disorders, and other multisystem features. The gene predisposing to SCA2 has been mapped, which encodes the ataxin 2 protein. A CAG repeat expansion in the coding region of ATXN2 gene can cause extension of polyglutamine chain in the protein. This paper reviews recent progress made in the research on SCA2 in regard to its clinical features, pathology, etiology, pathogenesis and treatment.
Animals
;
Ataxin-2
;
genetics
;
Humans
;
Spinocerebellar Ataxias
;
etiology
;
genetics
;
pathology
;
therapy
3.A pedigree affected with spinocerebellar ataxia type III.
Chinese Journal of Medical Genetics 2017;34(3):463-464
Adult
;
Ataxin-3
;
genetics
;
Female
;
Humans
;
Male
;
Middle Aged
;
Pedigree
;
Repressor Proteins
;
genetics
;
Spinocerebellar Ataxias
;
genetics
5.Genetic and clinical analysis in a Parkinson's disease family caused by expansion of SCA2.
Ying ZHANG ; Xingjiao LU ; Zhidong CEN ; Jin CAO ; Zhiyuan OUYANG ; Bo WANG ; Wei LUO
Chinese Journal of Medical Genetics 2015;32(6):776-779
OBJECTIVETo analyze the clinical and genetic features of a family with Parkinson's disease caused by expansion of CAG triplet repeat in the ATXN2 gene.
METHODSThe CAG/CAA repeat in the ATXN2 gene was analyzed by polymerase chain reaction (PCR) and Sanger sequencing.
RESULTSMolecular testing has documented a pathological heterozygous expansion of the CAG repeat from 33 to 35 in 6 patients and other 8 family members. Two patients had pure CAG triplet repeat expansion in their ATXN2 gene, while others had CAA interruption.
CONCLUSIONExpanded CAG/CAA repeat in the ATXN2 gene is the causative mutation of the disease in this family.The 8 members with expanded CAG/CAA repeat may be asymptomatic patients. It is supposed that the number and configuration of the ATXN2 CAG/CAA repeat expansion may play an important role in the phenotypic variability of Parkinson's disease.
Aged ; Ataxin-2 ; genetics ; Base Sequence ; Family Health ; Female ; Genetic Predisposition to Disease ; genetics ; Humans ; Male ; Middle Aged ; Parkinson Disease ; genetics ; pathology ; Pedigree ; Polymerase Chain Reaction ; Sequence Analysis, DNA ; methods ; Trinucleotide Repeat Expansion ; genetics
6.Murine Sca1+Lin- bone marrow contains an endodermal precursor population that differentiates into hepatocytes.
Keunhee OH ; Suh Youn SHON ; Myung Won SEO ; Hak Mo LEE ; Ju Eun OH ; Eun Young CHOI ; Dong Sup LEE ; Kyong Soo PARK
Experimental & Molecular Medicine 2015;47(10):e187-
The direct differentiation of hepatocytes from bone marrow cells remains controversial. Several mechanisms, including transdifferentiation and cell fusion, have been proposed for this phenomenon, although direct visualization of the process and the underlying mechanisms have not been reported. In this study, we established an efficient in vitro culture method for differentiation of functioning hepatocytes from murine lineage-negative bone marrow cells. These cells reduced liver damage and incorporated into hepatic parenchyma in two independent hepatic injury models. Our simple and efficient in vitro protocol for endodermal precursor cell survival and expansion enabled us to identify these cells as existing in Sca1+ subpopulations of lineage-negative bone marrow cells. The endodermal precursor cells followed a sequential developmental pathway that included endodermal cells and hepatocyte precursor cells, which indicates that lineage-negative bone marrow cells contain more diverse multipotent stem cells than considered previously. The presence of equivalent endodermal precursor populations in human bone marrow would facilitate the development of these cells into an effective treatment modality for chronic liver diseases.
Animals
;
Ataxin-1/*analysis
;
Bone Marrow Cells/*cytology
;
Cell Differentiation
;
Cell Proliferation
;
Cells, Cultured
;
Female
;
Hepatocytes/*cytology
;
Mice
;
Mice, Inbred BALB C
7.Subcellular localization of ataxin-3 and its effect on the morphology of cytoplasmic organoids.
Feifei WEI ; Han XIAO ; Zhiping HU ; Hainan ZHANG ; Chunyu WANG ; Heping DAI ; Jianguang TANG
Chinese Journal of Medical Genetics 2015;32(3):353-357
OBJECTIVETo explore the subcellular localization of ataxin-3 and the effect of polyglutamine (polyQ) expansion mutation on the morphology of mitochondrion, golgi apparatus and endoplasmic reticulum.
METHODSTransient transfection was employed to build cell models expressing wild-type or mutant ataxin-3 proteins. Indirect immunofluorescence was applied to identify markers of organelle membrane. The results were observed under a laser scanning confocal microscope.
RESULTSNo co-localization was observed for ataxin-3 protein and mitochondrial marker TOM20, but the percentage of cells with mitochondrial fragmentation has increased in cells expressing mutant ataxin-3 (P<0.05). No co-localization was observed for ataxin-3 protein and golgi marker GM130, and mutant ataxin-3 did not cause golgi fragmentation. Wide type and polyQ-expanded ataxin-3 both showed partial co-localization with ER marker calnexin. The latter showed more overlap with calnexin, and the overlapping signals were mostly located in the places where aggregates were situated.
CONCLUSIONPolyQ-expanded ataxin-3 protein may indirectly affect the integrity of mitochondria, but may cause no effect on the structure and functions of golgi apparatus. Endoplasmic reticulum may be another place where extended ataxin-3 protein can induce cytotoxicity in addition to the nucleus.
Ataxin-3 ; Cytoplasm ; genetics ; metabolism ; Endoplasmic Reticulum ; genetics ; metabolism ; HeLa Cells ; Humans ; Machado-Joseph Disease ; genetics ; metabolism ; Mitochondria ; genetics ; metabolism ; Nerve Tissue Proteins ; genetics ; metabolism ; Nuclear Proteins ; genetics ; metabolism ; Protein Transport ; Repressor Proteins ; genetics ; metabolism
10.Cloning and localization of A3IP -a novel protein that interacts with ataxin-3.
Feng-zhen HUANG ; Xuan HOU ; Guo WANG ; Fang CAI ; Hai-yan FANG ; Qian PAN ; Kun XIA ; Bei-sha TANG ; Hong JIANG
Chinese Journal of Medical Genetics 2013;30(4):394-398
OBJECTIVETo clone an A3IP gene and investigate its cellular and histological localization based on previous research which has identified part of A3IP sequence interacting with carboxyl-terminal of ataxin-3.
METHODSBioinformatic and Northern blotting were applied to clone the A3IP gene and detect the expression of its transcripts in various human tissues and brain regions. Western blotting and immunofluorescence staining were applied to detect expression of A3IP protein in cultured cells. Immunohistochemistry staining was applied to study the expression of A3IP protein in various human tissues and brain regions.
RESULTScDNA cloning of A3IP gene's reading frame and its sequence assembly were completed. Three transcripts (1 kb, 1.35 kb and 6 kb, respectively) of A3IP were found to express in various human tissues and brain regions. A3IP pEGFP expresses in cytoplasm of cultured COS-7 cells and various human tissues and brain regions including cerebral cortex, cerebellum, muscle, peripheral nerve, liver and kidney.
CONCLUSIONThe cloned A3IP gene encodes A3IP, a novel ataxin-3 interacting protein. Three transcripts of A3IP are expressed in various human tissues and brain regions. A3IP is a cytosolic protein.
Ataxin-3 ; Base Sequence ; Carrier Proteins ; genetics ; metabolism ; Cloning, Molecular ; Humans ; Molecular Sequence Data ; Nerve Tissue Proteins ; genetics ; metabolism ; Nuclear Proteins ; genetics ; metabolism ; Protein Binding ; Protein Transport ; Repressor Proteins ; genetics ; metabolism

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