1.Clinical and genetic analysis of a pedigree affected with Distal arthrogryposis type 5D due to compound heterozygous variants of ECEL1 gene.
Weiyu HU ; Baiyun CHEN ; Yang GAO ; Xiaona WANG ; Yuke LI ; Qianying LI ; Huichun ZHANG ; Chao GAO
Chinese Journal of Medical Genetics 2025;42(3):322-329
OBJECTIVE:
To explore the clinical phenotypes and genetic characteristics of a pedigree with Distal arthrogryposis type 5D (DA5D) caused by compound heterozygous variants in the ECEL1 gene.
METHODS:
A child (proband) diagnosed with DA5D and his family members (proband's parents and sister) who was admitted to the Department of Rehabilitation Medicine of Henan Children's Hospital in July 2022 due to "multiplex distal arthrogryposis" were enrolled into this study. Clinical data of the proband were collected and peripheral blood samples were obtained from the proband and members of his family about 3 mL. Trio-whole genome sequencing (trio-WGS) was carried out to detected the genetic variations of the proband and his family members. The candidate's pathogenic gene variants were screened and analyzed by Genome Aggregation Database (gnomAD) and other databases. The screened variants were annotated for clinical phenotypes using databases like the Online Mendelian Inheritance in Man (OMIM). The pathogenicity of the candidate variants was predicted by bioinformatics tools such as Provean. Based on the guidelines of the American College of Medical Genetics and Genomics (ACMG), pathogenicity ratings were conducted for variant sites. The protein conservation and mutation structure prediction of ECEL1 protein among species were carried out though MEGA-X and PyMOL. The research protocol of this study was reviewed by the Ethics Committee of Henan Provincial Children's Hospital (Approval No. 2023-H-H01), and informed consent for clinical research was obtained from the guardians of the probands.
RESULTS:
The proband had multiplex distal arthrogryposis involving hands, feet, knees, and ankles, and had right ptosis, micrognathia, low auricular position, and upturned nose. The parents and sister both had normal phenotypes. Trio-WGS and Sanger sequencing revealed that the child had compound heterozygous variants of paternal c.1742_c.1743insT and maternal c.2314T>G, for which the father and sister were carriers of the c.1742_c.1743insT heterozygous variant and the mother was carrier of c.2314T>A. Neither mutation site has been reported. According to guidelines of ACMG, the c.1742_c.1743insT variant was classified as likely pathogenic (PSV1+PM2_Supporting), and c.2314T>G was classified as uncertain (PM2_Supporting+PM3+PP3). The results of conserved analysis of amino acid residue sequences of ECEL1 protein showed that the missense mutation of the maternal c.2314T>G (p.Cys772Gly) was highly conserved among humans and other seven species. The protein structure prediction revealed that the c.1742_c.1743insT frameshift mutation led to the protein truncation, and the c.2314T>G missense mutation resulted in the failure of forming 1 disulfide bond.
CONCLUSION
The compound heterozygous variants of ECEL1 gene were considered to be pathogenic for this DA5D patient, which have expanded the mutational spectrum of the ECEL1 gene and provided a reference for clinical diagnosis as well as genetic counseling for this family.
Humans
;
Pedigree
;
Arthrogryposis/genetics*
;
Male
;
Female
;
Heterozygote
;
Phenotype
;
Mutation
;
Child
;
Metalloendopeptidases
2.Clinical and genetic analysis of a child with mental retardation autosomal dominant 7.
Zhihong ZHUO ; Yao WANG ; Tianjiao FU ; Xiao FANG ; Xiaoli XU ; Yue WANG ; Huimin KONG ; Huaili WANG
Chinese Journal of Medical Genetics 2022;39(5):530-533
OBJECTIVE:
To analyze the clinical and genetic characteristics of a child with clinical manifestations of hypoplasia, epilepsy and abnormal face.
METHODS:
The clinical data of the child were collected. The peripheral blood samples of the patient and his parents were extracted for high-throughput sequencing, and Sanger sequencing verification and bioinformatics analysis were performed to detect suspected pathogenic variants.
RESULTS:
The clinical manifestations of the child were overall developmental backwardness, seizures, autism, and special facial appearance. High throughput sequencing showed that there was a heterozygous mutation of exon 11: c.1920_c.1927delCCTCTACC (p.Ser641Rfs*31) of the DYRK1A gene. The same variant was found in neither of her parents, suggesting that it has a denovo origin.
CONCLUSION
The exon11: c.1920_c.1927delCCTCTACC (p.Ser641Rfs*31) mutation in DYRK1A gene was the genetic etiology of the case, which enriches the pathogenic gene spectrum of DYRK1A and provides the basis for clinical diagnosis and genetic counseling.
Arthrogryposis
;
Child
;
Facies
;
Female
;
Heterozygote
;
Humans
;
Intellectual Disability/genetics*
;
Mutation
3.Identification of a GNB1 gene variant in a child with autosomal dominant mental retardation 42.
Ying REN ; Yuqiang LYU ; Jian MA ; Dong WANG ; Guangye ZHANG ; Yi LIU ; Zhongtao GAI
Chinese Journal of Medical Genetics 2021;38(6):565-568
OBJECTIVE:
To explore the genetic basis for a child featuring global developmental delay.
METHODS:
DNA was extracted from peripheral blood sample taken from the patient and subjected to whole exome sequencing. Suspected variants were verified by Sanger sequencing of his family members.
RESULTS:
A heterozygous c.239T>C (p.Ile80Thr) variant of the GNB1 gene was detected in the proband, which was a verified to be de novo in origin.
CONCLUSION
The heterozygous c.239T>C (p.Ile80Thr) variant of the GNB1 gene probably underlay the disease in this child.
Arthrogryposis
;
Child
;
Family
;
GTP-Binding Protein beta Subunits
;
Heterozygote
;
Humans
;
Intellectual Disability/genetics*
;
Whole Exome Sequencing
4.Analysis of MYH3 gene variation and prenatal diagnosis for two pedigrees affected with congenital arthrogryposis.
Xueqin XU ; Lirong DING ; Huanzheng LI ; Zhaoke ZHENG ; Shaohua TANG
Chinese Journal of Medical Genetics 2019;36(5):447-450
OBJECTIVE:
To explore the genetic etiology of two pedigrees affected with congenital arthrogryposis.
METHODS:
Whole exome sequencing (WES) was used to screen potential variations in the proband. Suspected variations were analyzed with bioinformatics software and validated by Sanger sequencing.
RESULTS:
A heterozygous c.1123G>A (p.Glu375Lys) variation was detected in the proband and an affected fetus from pedigree 1, while a de novo heterozygous c.118 G>A (p.Val40Met) variation was detected in an affected fetus from pedigree 2.
CONCLUSION
The two heterozygous variations of the MYH3 gene probably underlie the disease in the pedigrees. Above results have facilitated genetic counseling and prenatal diagnosis.
Arthrogryposis
;
Cytoskeletal Proteins
;
genetics
;
Female
;
Heterozygote
;
Humans
;
Mutation
;
Pedigree
;
Pregnancy
;
Prenatal Diagnosis
;
Whole Exome Sequencing
5.A pedigree with distal arthrogryposis.
Qian WANG ; Xuan LIU ; Fengjuan ZHOU ; Xiaorong ZHAO ; Wenmei XIE
Chinese Journal of Medical Genetics 2017;34(6):936-937
Adolescent
;
Adult
;
Aged, 80 and over
;
Arthrogryposis
;
genetics
;
Child
;
Female
;
Humans
;
Male
;
Middle Aged
;
Pedigree
6.Clinical features and VPS33B mutations in a family affected by arthrogryposis, renal dysfunction, and cholestasis syndrome.
Da-Gui HUANG ; Jia-Jia LIU ; Li GUO ; Yuan-Zong SONG
Chinese Journal of Contemporary Pediatrics 2017;19(10):1077-1082
Arthrogryposis, renal dysfunction, and cholestasis (ARC) syndrome is an autosomal recessive disorder caused by mutations in the VPS33B or VIPAS39 gene. The aim of this study was to investigate the clinical features and VPS33B gene mutations of an infant with ARC syndrome. A 47-day-old female infant was referred to the hospital with the complaint of jaundiced skin and sclera for 45 days and abnormal liver function for 39 days. The patient had been managed in different hospitals, but the therapeutic effects were unsatisfactory due to undetermined diagnosis. Physical examination showed jaundice of the skin and sclera. Systemic skin was dry with desquamation in the limbs and trunk. There were no positive signs on cardiopulmonary examination. The liver was palpable 2.0 cm under the right subcostal margin. The hips and knees were flexed, and the extension was limited, with low muscular tone in the four limbs. Biochemical analysis demonstrated raised serum total bile acids, bilirubin (predominantly conjugated bilirubin) and transaminases, but the γ-glutamyl transpeptidase level was normal. Routine urine test revealed increased glucose as well as red and white blood cells. On genetic analysis, the infant was proved to be homologous for a VPS33B mutation c.1594C>T(p.R532X). She was definitely diagnosed to have ARC syndrome. Symptomatic and supportive therapy was given, but no improvement was observed, and the infant finally died at 3 months and 29 days of life.
Arthrogryposis
;
blood
;
genetics
;
Bile Acids and Salts
;
blood
;
Bilirubin
;
blood
;
Cholestasis
;
blood
;
genetics
;
Humans
;
Mutation
;
Renal Insufficiency
;
blood
;
genetics
;
Vesicular Transport Proteins
;
genetics
7.Analysis of the clinical, electrophysiological and genetic features of a family affected with hereditary neuropathy with liability to pressure palsies.
Chinese Journal of Medical Genetics 2015;32(1):31-35
OBJECTIVETo delineate the clinical, electrophysiological and genetics features of a family where 4 members were affected with hereditary neuropathy with liability to pressure palsies (HNPP).
METHODSClinical features of the 4 patients were summarized. Electrophysiological examination and genetic analysis were carried out.
RESULTSAll of the patients showed recurrent motor and sensory disturbances after minor traction or constriction. Electrophysiology study revealed that the prolonged latency and reduced conduction velocity of peripheral nerve were general and with multiple sites of affection. The nerve locations liable to entrapment showed conduction block. A deletion mutation of peripheral myelin protein 22 (PMP22) gene was identified by genetic analysis.
CONCLUSIONHNPP usually affects areas where nerves are liable to entrapment, and presents with motor and sensory disturbances of the innervated areas. Electrophysiological study reveals general nervous demyelination. Genetic analysis can clarify the diagnosis of HNPP.
Adult ; Arthrogryposis ; genetics ; physiopathology ; Hereditary Sensory and Motor Neuropathy ; genetics ; physiopathology ; Humans ; Male ; Myelin Proteins ; genetics ; Neural Conduction
8.The progress in molecular genetics and clinical features of arthrogryposis-renal tubular dysfunction-cholestasis syndrome.
Chinese Journal of Pediatrics 2014;52(1):69-71
Abnormalities, Multiple
;
genetics
;
Acidosis, Renal Tubular
;
genetics
;
pathology
;
therapy
;
Arthrogryposis
;
genetics
;
pathology
;
therapy
;
Biopsy
;
Carrier Proteins
;
genetics
;
Cholestasis
;
genetics
;
pathology
;
therapy
;
DNA Mutational Analysis
;
Humans
;
Infant, Newborn
;
Mutation
;
Syndrome
;
Vesicular Transport Proteins
;
genetics
9.First Korean Family with a Mutation in TPM2 Associated with Sheldon-Hall Syndrome.
Jung Min KO ; In Ho CHOI ; Goo Hyun BAEK ; Kee Won KIM
Journal of Korean Medical Science 2013;28(5):780-783
Sheldon-Hall syndrome (SHS) is a rare autosomal dominant, inherited arthrogryposis syndrome characterized by multiple congenital contractures of the distal limbs. To date, four genes that encode the skeletal muscle fiber complex have been confirmed as the causative genes. Mutations in MYH3 have been identified most frequently and few cases of SHS caused by TPM2 mutations have been reported worldwide. This report describes, for the first time, a Korean family with two generations of SHS resulting from a rare TPM2 mutation, p.R133W. The affected mother and daughter manifested typical facial features of SHS including a triangular face with downslanting palpebral fissures, small mouth, high arched palate, and prominent nasolabial folds, and showed camptodactyly of fingers and deformities of feet with congenital vertical tali. Generalized myopathy with relative sparing of the slow-twitch muscle fibers was also revealed by electromyography in the affected mother.
Alleles
;
Arthrogryposis/*genetics
;
Asian Continental Ancestry Group/*genetics
;
Exons
;
Female
;
Finger Phalanges/radiography
;
Foot Bones/radiography
;
Humans
;
Infant, Newborn
;
Mutation
;
Pedigree
;
Phenotype
;
Republic of Korea
;
Sequence Analysis, DNA
;
Tropomyosin/*genetics

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