1.Transcriptome profiling of Saposhnikovia divaricata growing for different years and mining of key genes in active ingredient biosynthesis.
Pei-Wen KOU ; Chang-le LIU ; Yi-Ke XU ; Bo LI ; Zhong-Xing SONG ; Yong-Sheng ZHANG ; Wen-Jing HUANG ; Zhi-Shu TANG
China Journal of Chinese Materia Medica 2022;47(17):4609-4617
Saposhnikovia divaricata is a commonly used bulk medicinal plant. To explore the key enzyme genes and their expression in the biosynthesis of chromone and coumarin, the key active components, we carried out transcriptome sequencing(Illumina HiSeq) and bioinformatics analysis for the 1-year-old(S1) and 2-year-old(S2) plants of S. divaricata. A total of 40.8 Gb data was obtained. After the sequence assembly via Trinity, 110 732 transcripts and 86 233 unigenes were obtained, which were aligned and annotated with NR, Swiss-Prot, GO, KEGG, and PFAM. Daucus carota and S. divaricata had the highest sequence homology. KEGG pathway enrichment showed that the differentially expressed genes were mainly enriched in plant hormone signal transduction, phenylpropanoid biosynthesis, and flavonoid biosynthesis pathways. A total of 27 differentially expressed unigenes, including 13 enzyme genes, were identified in the pathways related to the synthesis of active ingredients in S. divaricata. Compared with S1 plant, S2 plant showed up-regulated expression of PAL, BGL, C4H, 4CL, CYP98A, CSE, REF, and CCoAOMT and down-regulated expression of CHS, CAD, and COMT. HCT and POD had both up-regulated and down-regulated unigenes. Among them, PAL, C4H, 4CL, BGL, and CHS can be used as candidate genes for the synthesis of the active ingredients in S. divaricata. The four key enzyme genes were verified by RT-qPCR, which showed the results consistent with transcriptome sequencing. This study enriches the genetic information of S. divaricata and provides support for the identification of candidate genes in the biosynthesis of secondary metabolites.
Apiaceae/genetics*
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Chromones
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Coumarins
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Flavonoids
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Gene Expression Profiling
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Gene Expression Regulation, Plant
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High-Throughput Nucleotide Sequencing/methods*
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Plant Growth Regulators
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Transcriptome
2.Correlation between growth characteristics and quality of rhizomes of Notopterygium incisum under wild tending.
Ping YANG ; Hong-Lan WANG ; Hui SUN ; Wen-Tao ZHU ; Tao QIU ; Jiu-Zhen DU ; Hong-Bing SUN ; Yi ZHOU ; Shun-Yuan JIANG
China Journal of Chinese Materia Medica 2020;45(4):739-745
Study the growth and development process of rhizomes(bamboo-like part) of Notopterygium incisum and the changes of carbohydrate, endogenous hormones and secondary metabolites, and provide theoretical guidance for the formation of high-quality N. incisum medicinal commodities under artificial cultivation. The One-year-old seedlings were transplanted to the original habitat,and the growth and physiological characteristics of N. incisum were dynamically monitored. The results showed that: ① Seedlings transplanted to the original habitat in spring could form rhizomes(bamboo-like part) in the same year. ② After 60 days of transplantation, the root length and root diameter of underground part of N. incisum had increased rapidly, and carbohydrate content in roots and rhizomes had accumulated rapidly. After 120 days of transplantation, the roots and rhizomes of underground part had grown slowly, and starch content in roots and rhizomes increased continuously, while sucrose and total soluble sugar content decreased gradually. ③ The content of abscisic acid(ABA) in rhizomes decreased firstly and then increased, while the indole acetic acid(IAA) content stabilized firstly and then increased rapidly, and the contents of gibberellin(GA_3) and zeatin riboside(ZR) continued to increase. ④ The content of notopterol in rhizomes was higher than that in roots, while the content of isoimperatorin was lower than that in roots, but the total content of the both in rhizomes was higher than that in roots. Therefore, N. incisum can form rhizomes with high content of secondary metabolites under wild tending, and the growth and development of rhizomes are closely related to changes in carbohydrates and are regulated by related endogenous hormones.
Apiaceae/growth & development*
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Ecosystem
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Phytochemicals/analysis*
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Plant Roots/growth & development*
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Plants, Medicinal/growth & development*
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Rhizome/growth & development*
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Secondary Metabolism
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Seedlings/growth & development*
3.Comparative study on quality of decoction pieces of Saposhnikovia divaricata with different growth patterns and years and thinking of standard of decoction pieces of S. divaricata in Chinese Pharmacopoeia.
Xue XUE ; Hao WANG ; Tian-Ying JIA ; Wen-Jia QU ; Hai-Li WANG ; Jie-Ping XIN ; Meng-Nan LIU ; Hui XIONG ; Xiang-Ri LI
China Journal of Chinese Materia Medica 2019;44(18):4034-4042
This study aims to compare the internal chemical composition and appearance indifferent growth patterns and years of Saposhnikovia divaricata decoction pieces,which was applied to explore the effect of growth patterns and years on its quality. The appearance characteristic data of 55 batches of different growth patterns and years of S. divaricata were collected using PANTONE color card.High performance liquid chromatography( HPLC) was used to determine the contents of prim-O-glucosyl-cinmifugin,cimifugin,4-O-β-D-glucosyl-5-O-methylvisamminol and sec-O-glucosylhamaudol. The content of alcohol soluble extract and water-soluble extract were determined by hot-dip method. The content of volatile oil was determined by steam distillation. The correlation between growth patterns and years and the contents of 4 chromones,extracts and volatile oil were analyzed by modern statistical methods. Also,the method of comprehensively evaluating the quality of Chinese herbal pieces was developed by combining the growth patterns and years,appearance and chemical indexes. MTT assay was used to evaluate the effects on the survival rate of RAW264. 7 cells at four different concentrations of chromones and LPS was used to stimulate well-growing RAW264. 7 cells to establish an inflammatory model. The contents of NO and TNF-α in cell supernatant were detected by NO test kit and ELISA method. The contents of alcohol soluble extracts and water-soluble extracts in different growth patterns and years are: wild products
Animals
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Apiaceae/growth & development*
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Chromatography, High Pressure Liquid
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Drugs, Chinese Herbal/standards*
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Mice
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Nitric Oxide/metabolism*
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Oils, Volatile/analysis*
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RAW 264.7 Cells
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Tumor Necrosis Factor-alpha/metabolism*
4.Transcriptomic analysis identifies differentially expressed genes (DEGs) associated with bolting and flowering in Saposhnikovia divaricata.
Shuang-Li LIU ; Xiao-Hui WANG ; Yu-Gang GAO ; Yan ZHAO ; Ai-Hua ZHANG ; Yong-Hua XU ; Lian-Xue ZHANG
Chinese Journal of Natural Medicines (English Ed.) 2018;16(6):446-455
Saposhnikovia divaricata is a valuable Chinese medicinal herb; the transformation from vegetative growth to reproductive growth may lead to the decrease of its pharmacological activities. Therefore, the study of bolting and flowering for Saposhnikovia divaricata is warranted. The present study aimed to reveal differentially expressed genes (DEGs) and regularity of expression during the bolting and flowering process, and the results of this study might provide a theoretical foundation for the suppression of early bolting for future research and practical application. Three sample groups, early flowering, flower bud differentiation, and late flowering (groups A, B, and C, respectively) were selected. Transcriptomic analysis identified 67, 010 annotated unigenes, among which 50, 165 were differentially expressed including 16, 108 in A vs B, and 17, 459 in B vs C, respectively. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway functional classification analysis were performed on these differentially expressed genes, and five important pathways were significantly impacted (P ≤ 0.01): plant circadian rhythm, other glycan degradation, oxidative phosphorylation, plant hormone signal transduction, and starch and sucrose metabolism. Plant hormone signal transduction might play an important role in the bolting and flowering process. The differentially expressed indole-3-acetic acid (IAA) gene showed significant down-regulation during bolting and flowering, while the transport inhibitor response 1 (TIR1) gene showed no significant change during the bolting process. The expression of flowering related genes FLC, LYF, and AP1 also showed a greater difference at different development stages. In conclusion, we speculate that the decrease in auxin concentration is not caused by the degrading effect of TIR1 but by an alternative mechanism.
Apiaceae
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genetics
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growth & development
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Flowers
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genetics
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growth & development
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Gene Expression Profiling
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Gene Expression Regulation, Plant
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Gene Regulatory Networks
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Genes, Plant
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RNA, Plant
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genetics
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Reproducibility of Results
5.Cultural regionalization for Notopterygium incisum based on 3S technology platform. I. Evaluation for growth suitability for N. incisum based on ecological factors analysis by Maxent and ArcGIS model.
Hong-bing SUN ; Hui SUN ; Shun-yuan JIANG ; Yi ZHOU ; Wen-long CAO ; Ming-chang JI ; Wen-tao ZHY ; Han-jing YAN
China Journal of Chinese Materia Medica 2015;40(5):853-862
Growth suitability as assessment indicators for medicinal plants cultivation was proposed based on chemical quality determination and ecological factors analysis by Maxent and ArcGIS model. Notopterygium incisum, an endangered Chinese medicinal plant, was analyzed as a case, its potential distribution areas at different suitability grade and regionalization map were formulated based on growth suitability theory. The results showed that the most suitable habitats is Sichuan province, and more than 60% of the most suitable areawas located in the western Sichuan such as Aba and Ganzi prefectures for N. incisum. The results indicated that habitat altitude, average air temperature in September, and vegetation types were the dominant factors contributing to the grade of plant growth, precipitation and slope were the major factors contributing to notopterol accumulation in its underground parts, while isoimperatorin in its underground parts was negatively corelated with precipitation and slope of its habitat. However, slope as a factor influencing chemical components seemed to be a pseudo corelationship. Therefore, there were distinguishing differences between growth suitability and quality suitability for medicinal plants, which was helpful to further research and practice of cultivation regionalization, wild resource monitoring and large-scale cultivation of traditional Chinese medicine plants.
Apiaceae
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growth & development
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China
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Ecosystem
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Environment
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Geographic Information Systems
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Soil
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chemistry
;
Temperature
6.Effects of P and K fertilizer on content of coumarin and yield of Glehnia littoralis.
Chuang-shu SUN ; Kan ZHENG ; Wei LI ; Gui-lin CHEN ; Rong YU ; Jian-guo YU
China Journal of Chinese Materia Medica 2015;40(18):3543-3548
By a orthogonal experiment, the influence of different ratio of phosphorus and potassium fertilizers on imperatorin, isoimperatorin and psoralen contents and yield of Glehnia littoralis were studied. The results showed that root dry weight and the yield of G. littoralis increased when reasonably applied phosphorus fertilizer combined with potassium fertilizer within a certain range. And the influence of phosphorus fertilizer was greater than that of potassium fertilizer. The optimal value of root dry weight and yield achieved at both P2O5 360 kg x hm(-2), K2O 270 kg x hm(-2) and P2O5 360 kg x hm(-2), K2O 180 kg x hm(-2). The effects of different phosphorus and potassium treatments on the content of imperatorin, isoimperatorin and psoralen in G. littoralis were determined, which shows that the content increased with the moderate increase of phosphorus and potassium. And the effects of phosphorus fertilizer were more significantly. The isoimperatorin content achieved the largest value at P2O5 360 kg x hm(-2), K2O 270 kg x hm(-2), also a larger content of imperatorin and psoralen. The imperatorin content is the largest when applied P2O5 360 kg x hm(-2), K2O 180 kg x hm(-2), and the isoimperatorin content was higher as well. So that the treatment of P2O5 360 kg x hm(-2), K2O 180 kg x hm(-2) are suitable for promote to the agricultural production, which could improve the quality and yield of G. littoralis.
Agriculture
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Apiaceae
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chemistry
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growth & development
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metabolism
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Coumarins
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analysis
;
metabolism
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Drugs, Chinese Herbal
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analysis
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metabolism
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Fertilizers
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analysis
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Phosphorus
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analysis
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metabolism
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Potassium
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analysis
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metabolism
7.Herbal textual research on origin and development of traditional Chinese medicine "duhuo" and "qianghuo".
Feng SHAN ; Yuan YUAN ; Jin-Da HAO ; Lu-Qi HUANG
China Journal of Chinese Materia Medica 2014;39(17):3399-3403
To clarify the origin and development of the traditional Chinese medicine "Duhuo" and "Qianghuo" with medicinal literatures. Medical literatures of past dynasties were analysed and combined with the modern material. The "Duhuo" in Herbal writing Shen Nong Ben Cao Jing include traditional Chinese medicine "Duhuo" and "Qianghuo", "Qianghuo" was separated from "Duhuo" due to the distinguish of clinical application. The origin of "Qianghuo" is Notopterygium incisum and N. forbesii, However, The origin of "Duhuo" is very complex, Angelica pubescens f. biserrata as authentic "Duhuo" was used from Song Dynasty. "Qianghuo" was originated from "Duhuo".
Angelica
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chemistry
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growth & development
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Apiaceae
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chemistry
;
growth & development
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China
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Drugs, Chinese Herbal
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isolation & purification
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Geography
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Humans
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Medicine, Chinese Traditional
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Research
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Species Specificity
8.Dynamic accumulation of dry substance and active components in root of Peucedanum praeruptorum.
Nian-Jun YU ; Wen-Ling WU ; Shou-Jin LIU ; Cheng-Wu FANG ; Ji-Ren XIANG ; Li PAN
China Journal of Chinese Materia Medica 2013;38(10):1489-1492
OBJECTIVETo study the dynamic accumulation regulation of dry substance and four coumarin constituents in root of Peucedanum praeruptorum, so to provide the basis for optimal harvest time.
METHODRoots of P. praeruptorum were collected periodically. The dry weight of the roots was measured and the content of four coumarins was determined by HPLC method.
RESULTThe dry substance accumulation of the root reached the maximum amount and the coumarin contents maintain stability at the end of the vegetative growth period. The coumarins of roots decline significantly in the reproductive growth period.
CONCLUSIONThe most optimum collecting time of root of P. praeruptorum cultivated in Ningguo county in Anhui province should be from December to next February.
Apiaceae ; chemistry ; growth & development ; metabolism ; Chromatography, High Pressure Liquid ; Coumarins ; analysis ; metabolism ; Plant Extracts ; analysis ; metabolism ; Plant Roots ; chemistry ; growth & development ; metabolism
9.GC/MS analysis of high-performance liquid chromatography fractions from Sophora flavescens and Torilis japonica extracts and their in vitro anti-neosporal effects on Neospora caninum.
Hun Su SEO ; Kyoung Hee KIM ; Dae Yong KIM ; Bong Kyun PARK ; Nam Shik SHIN ; Jae Hoon KIM ; Heejeong YOUN
Journal of Veterinary Science 2013;14(3):241-248
We analyzed alcoholic extracts of herbs possessing anti-neosporal activity against Neospora (N.) caninum. To identify the chemical components of Sophora (S.) flavescens and Torilis (T.) japonica associated with anti-neosporal activity, specific fractions were isolated by high-performance liquid chromatography (HPLC). In vitro activity of the fractions against N. caninum was then assessed. Gas chromatography/mass spectrometry (GC/MS) was used to identify and quantify specific anti-neosporal molecules in the herbal extracts. Almost all HPLC fractions of S. flavescens and T. japonica had higher levels of anti-neosporal activity compared to the not treated control. Active constituents of the extracts were sophoridane, furosardonin A, and tetraisopropylidene-cyclobutane in S. flavescens; 5,17-beta-dihydroxy-de-A-estra-5,7,9,14-tetraene, furanodiene, and 9,12-octadecadienoic acid (Z,Z)-(CAS,1) in T. japonica.
Apiaceae/*chemistry
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Chromatography, High Pressure Liquid
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Coccidiostats/*chemistry
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Fruit/chemistry
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Gas Chromatography-Mass Spectrometry
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Neospora/*drug effects/growth & development
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Plant Extracts/*chemistry
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Plant Roots/chemistry
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Sophora/*chemistry
10.Change of chemical constituents in Changium smyrnioides at different ages.
Changlin WANG ; Qiaosheng GUO ; Boxing CHENG ; Chengya WANG ; Tinghui ZHOU
China Journal of Chinese Materia Medica 2010;35(22):2945-2949
OBJECTIVETo analyze the dynamic change of chemical constituents in Changium smyrnioides at different ages and give a reference for standard cultivation.
METHODThe contents of polysaccharides, mannitol and choline in the roots were determined by colorimetry. HPLC was used to analyze water-soluble components in the roots. GC-MS was used to analyze volatile oil components in the leaves. Similarity coefficient of water-soluble components was calculated by included angle cosine method.
RESULTThere was significant difference in content of the analyzed chemical constituents except polysaccharide. Contents of mannitol, physiological ash and polysaccharide in the adult plant were higher than those in the young plant. On the contrast, content of water-soluble components and choline in the young plant was higher than that in the adult plant. With the increase of the growth years, water-soluble components in the roots and volatile oil components in the leaves were gradually concentrated.
CONCLUSIONThe growth time significantly affects the chemical constituents in Ch. smyrnioides, the reasonable harvest time is from the second to the forth year after transplanting.
Apiaceae ; chemistry ; growth & development ; Plant Extracts ; analysis ; Plant Leaves ; chemistry ; growth & development

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