1.Investigation of a special neutralizing epitope of HEV E2s.
Min YOU ; Lu XIN ; Yi YANG ; Xiao ZHANG ; Yingwei CHEN ; Hai YU ; Shaowei LI ; Jun ZHANG ; Zhiqiang AN ; Wenxin LUO ; Ningshao XIA
Protein & Cell 2014;5(12):950-953
Antibodies, Monoclonal
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chemistry
;
immunology
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Antigens, Viral
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chemistry
;
genetics
;
immunology
;
Binding Sites
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Capsid Proteins
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chemistry
;
genetics
;
immunology
;
Epitopes
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chemistry
;
genetics
;
immunology
;
Escherichia coli
;
genetics
;
metabolism
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Gene Expression
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Hepatitis E
;
immunology
;
prevention & control
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virology
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Hepatitis E virus
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chemistry
;
immunology
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Humans
;
Molecular Docking Simulation
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Mutagenesis, Site-Directed
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Peptide Mapping
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Protein Binding
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Recombinant Proteins
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chemistry
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genetics
;
immunology
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Viral Hepatitis Vaccines
;
administration & dosage
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biosynthesis
2.Hepatitis C virus: virology and life cycle.
Chang Wook KIM ; Kyong Mi CHANG
Clinical and Molecular Hepatology 2013;19(1):17-25
Hepatitis C virus (HCV) is a positive sense, single-stranded RNA virus in the Flaviviridae family. It causes acute hepatitis with a high propensity for chronic infection. Chronic HCV infection can progress to severe liver disease including cirrhosis and hepatocellular carcinoma. In the last decade, our basic understanding of HCV virology and life cycle has advanced greatly with the development of HCV cell culture and replication systems. Our ability to treat HCV infection has also been improved with the combined use of interferon, ribavirin and small molecule inhibitors of the virally encoded NS3/4A protease, although better therapeutic options are needed with greater antiviral efficacy and less toxicity. In this article, we review various aspects of HCV life cycle including viral attachment, entry, fusion, viral RNA translation, posttranslational processing, HCV replication, viral assembly and release. Each of these steps provides potential targets for novel antiviral therapeutics to cure HCV infection and prevent the adverse consequences of progressive liver disease.
Antigens, CD81/metabolism
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Genome, Viral
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Hepacivirus/genetics/*physiology
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Humans
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RNA, Viral/metabolism
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Scavenger Receptors, Class B/metabolism
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Viral Envelope Proteins/chemistry/metabolism
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Viral Nonstructural Proteins/chemistry/metabolism
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Virus Assembly
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Virus Internalization
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Virus Replication
3.Establishment of a high-throughput screening assay for interaction inhibitor between BST-2 and Vpu.
Xiao-Jing PANG ; Si-Qi HU ; Yue ZHANG ; Shan CEN ; Qi JIN ; Fei GUO
Chinese Journal of Virology 2012;28(6):633-638
BST-2 plays an important role in host innate immune response via inhibiting the release of HIV-1. HIV-1 accessory protein Vpu can interact with BST-2 through its transmembrane domains, degrade BST-2, and decrease BST-2 that are transported to the cell surface, thus anti-virus function of BST-2 is antagonized. In our study, we constructed plasmid RB connecting Rluc to the N-termimal of BST-2, and plasmid VE connecting EYFP to the C-terminal of Vpu. The two fusion proteins were co-expressed in 293 cells, and the interaction between the two proteins was detected via BRET method. And we further established a stable 293 cell line of dual-expression. By using BRET method, and the interaction between BST-2 and Vpu transmembrane domain as the target, a high-throughput screening assay was created that was expected to seek novel interaction inhibitors.
Antigens, CD
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chemistry
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genetics
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metabolism
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Cell Line
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GPI-Linked Proteins
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chemistry
;
genetics
;
metabolism
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HIV Infections
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genetics
;
metabolism
;
virology
;
HIV-1
;
genetics
;
metabolism
;
High-Throughput Screening Assays
;
methods
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Human Immunodeficiency Virus Proteins
;
genetics
;
metabolism
;
Humans
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Protein Binding
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Protein Structure, Tertiary
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Viral Regulatory and Accessory Proteins
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genetics
;
metabolism
4.Genetic characterization of HA1 gene of influenza H3N2 virus isolates during 2008-2009 in Zhuhai, China.
Hong-xia LI ; Quan-de WEI ; Li-rong ZHANG ; Jing-tao ZHANG ; Yi-xiong LIN ; Yan-mei FANG ; Yu-ke ZHENG
Chinese Journal of Virology 2011;27(2):117-121
To understand the HA1 genetic variation characterization of influenza H3N2 virus isolates in Zhu-hai during 2008-2009, we selected 20 of H3N2 Influenza strains cultured in MDCK cell. Viral RNAs were extracted and amplified by using RT-PCR. The amplified products were purified after identified by gel electrophoresis and then the nucleotide sequences of the amplicons were determined. The results were analyzed by the software ClustalX and MEGA4. 1. When compared with the amino acid sequences of the epitopes of HA1 district of H3N2 influenza vaccine recommended by WHO in 2008, changes were found in those of H3N2 influenza strains in Zhuhai in 2008: K140I in all of H3N2 influenza strains, L157S in 08-0343 and 08-0677, K158R in 08-0466, 08-0620 and 08-0667, K173E in 08-0466 and 08-0620, K173N in 08-0667, and I192T in 08-0667. The epitopes of HA1 district of H3N2 influenza strains in Zhuhai in 2009 are different from that of H3N2 influenza vaccine during the same time: K173Q and P194L occur in all of H3N2 influenza strains, N144K, K158N, and N189K occur in the strains except the strain 09-0056. HA1 domain of H3N2 influenza strains in 2009 has lost a glycosylation site at amino acid position 144 while the glycosylation sites of HA1 domain of H3N2 influenza stains isolated in 2008 remained. This study suggested that H3N2 influenza virus in Zhuhai in 2008 was not evolved a novel variant and H3N2 influenza variant in 2009 was attributed to antigenic drift in HA1 district.
Animals
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Antigens, Viral
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immunology
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Cell Line
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China
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Dogs
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Epitopes
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immunology
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Glycosylation
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Hemagglutinin Glycoproteins, Influenza Virus
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chemistry
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genetics
;
immunology
;
metabolism
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Humans
;
Influenza A Virus, H3N2 Subtype
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classification
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genetics
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immunology
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isolation & purification
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Mutation
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Phylogeny
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Sequence Analysis, DNA
5.Molecular characterization of a 13-amino acid deletion in VP1 (1D) protein and novel amino acid substitutions in 3D polymerase protein of foot and mouth disease virus subtype A/Iran87.
Majid ESMAELIZAD ; Saber JELOKHANI-NIARAKI ; Khadije HASHEMNEJAD ; Morteza KAMALZADEH ; Mohsen LOTFI
Journal of Veterinary Science 2011;12(4):363-371
The nucleotide sequence of the VP1 (1D) and partial 3D polymerase (3Dpol) coding regions of the foot and mouth disease virus (FMDV) vaccine strain A/Iran87, a highly passaged isolate (~150 passages), was determined and aligned with previously published FMDV serotype A sequences. Overall analysis of the amino acid substitutions revealed that the partial 3Dpol coding region contained four amino acid alterations. Amino acid sequence comparison of the VP1 coding region of the field isolates revealed deletions in the highly passaged Iranian isolate (A/Iran87). The prominent G-H loop of the FMDV VP1 protein contains the conserved arginine-glycine-aspartic acid (RGD) tripeptide, which is a well-known ligand for a specific cell surface integrin. Despite losing the RGD sequence of the VP1 protein and an Asp26-->Glu substitution in a beta sheet located within a small groove of the 3Dpol protein, the virus grew in BHK 21 suspension cell cultures. Since this strain has been used as a vaccine strain, it may be inferred that the RGD deletion has no critical role in virus attachment to the cell during the initiation of infection. It is probable that this FMDV subtype can utilize other pathways for cell attachment.
Amino Acid Sequence
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Amino Acid Substitution
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Antigens, Viral/chemistry/*genetics/metabolism
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Capsid Proteins/chemistry/*genetics/metabolism
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Cloning, Molecular
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Foot-and-Mouth Disease Virus/classification/*genetics/*metabolism
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Gene Expression Regulation, Viral
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Molecular Sequence Data
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Phylogeny
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Viral Nonstructural Proteins/chemistry/*genetics/metabolism
6.Expression and utilization of 3AB nonstructural protein of foot-and-mouth disease virus in Escherichia coli.
Junjun SHAO ; Huiyun CHANG ; Tong LIN ; Guozheng CONG ; Junzheng DU ; Shandian GAO
Chinese Journal of Biotechnology 2011;27(2):180-184
To develop a sensitive and specific ELISA for detection of antibodies to the nonstructural protein of FMDV. We cloned and expressed FMDV nonstructural protein 3AB in Escherichia coli expression system. The recombinant protein 3AB was purified with Ni-NTA HisBind Resins and characterized by Western blotting. An indirect ELISA based on purified protein 3AB as a coating antigen was established. The specificity and sensitivity of this assay were evaluated by comparison with a commercial 3ABC-ELISA kit in detecion of serum samples. The results showed that the recombinant protein 3AB was expressed as a formation of inclusion bodies in Escherichia coli. The purified protein could specificially react with FMDV infection antibodies in Western blotting assay, but no reaction with the immune antibodies induced with vaccine. Two assays were no significant differences in specificity and sensitivity for detection of field samples (P>0.05). Therefore, we speculated that the recombinant protein 3AB is a promising molecular marker, which may effectively differentiate FMD-infected from vaccinated animals in a herd.
Animals
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Antibodies, Viral
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analysis
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Antigens, Viral
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biosynthesis
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genetics
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immunology
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Cattle
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Cattle Diseases
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diagnosis
;
immunology
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Enzyme-Linked Immunosorbent Assay
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Escherichia coli
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genetics
;
metabolism
;
Foot-and-Mouth Disease
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diagnosis
;
immunology
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Foot-and-Mouth Disease Virus
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chemistry
;
genetics
;
isolation & purification
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Genetic Vectors
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genetics
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Recombinant Proteins
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biosynthesis
;
genetics
;
immunology
;
Viral Nonstructural Proteins
;
biosynthesis
;
genetics
;
immunology
7.A novel innate antiviral factor-tetherin.
Yi-Shu YANG ; Xiao-Li WANG ; Ze-Ling LI ; Yi ZENG
Chinese Journal of Virology 2010;26(1):71-75
Animals
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Antigens, CD
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chemistry
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genetics
;
metabolism
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Antiviral Agents
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chemistry
;
metabolism
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GPI-Linked Proteins
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HIV Infections
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metabolism
;
virology
;
HIV-1
;
genetics
;
physiology
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Human Immunodeficiency Virus Proteins
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genetics
;
metabolism
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Humans
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Membrane Glycoproteins
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chemistry
;
genetics
;
metabolism
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Protein Binding
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Viral Regulatory and Accessory Proteins
;
genetics
;
metabolism
;
Virus Shedding
8.Improved expression of HLA-A* 2402-BSP in Escherichia coli and its tetramer preparation.
Qian-Tao JIA ; Li-Hui XU ; Feng-Yao LI ; Qing-Bing ZHA ; Xian-Hui HE
Chinese Journal of Biotechnology 2007;23(2):284-291
HLA-A* 2402 is one of the most frequently encountered HLA-A alleles in East Asian populations. In order to study the CD8+ T cell responses in Chinese populations, we have described the generation and functional test of HLA-A* 2402 tetramer loaded with HCMV pp65(341-349) peptide (QYDPVAALF, QYD). The cDNA of HLA-A* 2402 heavy chain was cloned by RT-PCR from one of the donors. DNA fragment encoding the ectodomain of HLA-A* 2402 heavy chain fused at its carboxyl-terminal a BirA substrate peptide (BSP) was amplified by PCR with the cloned heavy chain cDNA as a template. The wild-type gene of HLA-A* 2402-BSP was not expressed in Escherichia coli (E. coli), while mutant HLA-A* 2402-BSP gene with optimized codons was overexpressed as inclusion bodies in E. coli. Furthermore, the soluble HLA-A* 2402-QYD monomers were generated by in vitro refolding of washed inclusion bodies in the presence of beta2-microglobulin and QYD peptide. The tetramer was subsequently formed by mixing HLA-A* 2402-QYD monomers with streptavidin-PE at a molar ratio of 4:1. Flow cytometry analysis indicated that this tetramer possessed binding activity with specific CTL from HLA-A24+ donors and the frequencies of tetramer-binding CTL were 0.09% - 0.37% within total CD8+ T cells. This tetrameric agent provides a powerful tool to explore the secrets of CTL responses against HCMV antigens in HLA-A* 2402 individuals.
Amino Acid Sequence
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CD8-Positive T-Lymphocytes
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cytology
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metabolism
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Carbon-Nitrogen Ligases
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metabolism
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Electrophoresis, Polyacrylamide Gel
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Escherichia coli
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genetics
;
Escherichia coli Proteins
;
metabolism
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Flow Cytometry
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Gene Expression
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HLA-A Antigens
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chemistry
;
genetics
;
metabolism
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HLA-A24 Antigen
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Humans
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Oligopeptides
;
genetics
;
metabolism
;
Phosphoproteins
;
chemistry
;
genetics
;
metabolism
;
Protein Multimerization
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Recombinant Fusion Proteins
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chemistry
;
genetics
;
metabolism
;
Repressor Proteins
;
metabolism
;
Substrate Specificity
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T-Lymphocytes, Cytotoxic
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cytology
;
metabolism
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Viral Matrix Proteins
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chemistry
;
genetics
;
metabolism
9.Study of fusion protein and attachment glycoprotein of Nipah virus expressed in recombinant baculovirus.
Xi-Jun WANG ; Sen HU ; Jin-Ying GE ; Qing-Hua WANG ; Li-Ting QIN ; Zhi-Gao BU
Chinese Journal of Biotechnology 2006;22(3):418-424
In this study, Recombinant baculoviruses rBac-NF and rBac-NG were generated for expressing F and G proteins Nipah virus (NiV) . The expression of recommbinant G (rNG) and F (rNF) protein in rBac-NF and rBac-NG infected cells were confirmed by western-blot. Both rNG and rNF showed sensitive and specific antigenic reaction to rabbit serum anti-Nipah virus in indirect immunofluorescence detection and indirect ELISA. Immunization with rBac-NF and rBac-NG infected insect cells elicited G ad F protein specific antibody responses in mice. Furthermore, the G ad F specific antibodies could neutralize the infectivity of the VSVdeltaG* F/G, the NiV F and G envelope glycoproteins psudotyped recombinant Vesicular Stomatitis Virus expressing green fluorescence protein. The results demonstrated F and G protein expressed by the recombinant baculoviruses could be safe economic diagnostic antigens for the surveillance and monitoring of NiV and promising subunit vaccines for the prevention of NiV.
Animals
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Antigens, Viral
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immunology
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Baculoviridae
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genetics
;
metabolism
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Mice
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Mice, Inbred BALB C
;
Nipah Virus
;
chemistry
;
genetics
;
Rabbits
;
Recombinant Fusion Proteins
;
biosynthesis
;
genetics
;
immunology
;
Recombination, Genetic
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Viral Envelope Proteins
;
biosynthesis
;
genetics
;
immunology
10.Study on chronical hepatitis B with treatment of integrative traditional Chinese and Western medicine.
Hui-yin YANG ; Jun LI ; Mao YI
China Journal of Chinese Materia Medica 2006;31(15):1277-1280
OBJECTIVETo study curative effect of chronical hepatitis B with treatment of integrative traditional Chinese and western medicine.
METHOD115 cases of HBeAg and/or HBVDNA positive chronical hepatitis B were randomly divided into two groups in control. The first group treated by traditional Chinese medicine (TCM)-Fufang Huangqi granule and the second treated by intergrative traditional Chinese and western medicine (ICWM)-Fufang Huangqi granule and lamivudine for at least 24 weeks.
RESULTThe positive rate of HBVDNA at 12, 24 weeks, and the positive rate of HBeAg at 24 weeks in TCM are markedly lower than those of before treatment (P < 0.01). The positive rate of HBeAg and the positive rate of HBVDNA in ICWM are markedly lower than those of before treatment both at 12, 24 weeks (P < 0.01). The average values of HBVDNA are markly lower than before treatment in two groups at both 12,24 weeks (P < 0.01). At 12 weeks, the negative-turning rate of HBVDNA in the ICWM group is 79.17%, which shows significant difference in comparision with 40.00% in the TCM group (P < 0.01). The negative-turning rate of HBeAg in the ICWM group is 26.92%, which shows no significant difference in comparision with 32. 08% in the TCM group. At 24 weeks, the negative-turning rate of HBVDNA in the ICWM group is 85.71%, which shows significant difference in comparision with 50.00% in the TCM group (P < 0.01). The negative-turning rate of HBeAg in the ICWM group is 36.36%, which shows no significant difference in comparision with 28.57% in the TCM group. At 12 weeks,the total effective rate of the ICWM group is 96. 43%, which shows significant difference in comparision with 71.26% in the TCM group (P<0.01). At 24 weeks, the total effective rate of the ICWM group is 88. 00%, which shows significant difference in comparision with 67.61 % in the TCM group (P < 0.01). The average values of ALT and AST are markly improved than those of before treatment in two groups (P < 0.01). The average values of ALB is markly higher than before in TCM groups after 24 weeks treatment (P < 0.01).
CONCLUSIONFufang Huangqi granule integrated with lamivudine possesses a better effect for counteracting the hepatitis B virus and improving the liver functioin than only itself.
Adolescent ; Adult ; Aged ; Albumins ; metabolism ; Anti-HIV Agents ; therapeutic use ; Astragalus membranaceus ; chemistry ; DNA, Viral ; blood ; Drug Combinations ; Drug Synergism ; Drugs, Chinese Herbal ; isolation & purification ; therapeutic use ; Female ; Hepatitis B e Antigens ; blood ; Hepatitis B virus ; genetics ; Hepatitis B, Chronic ; blood ; drug therapy ; Humans ; Lamivudine ; therapeutic use ; Male ; Middle Aged ; Plants, Medicinal ; chemistry

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