1.Development of porcine induced pluripotent stem cells with a CD163 reporter system.
Wei YUE ; Juqing ZHANG ; Xiaolong WU ; Xinchun YANG ; Qiaoyan SHEN ; Shuai YU ; Zhenshuo ZHU ; Chengbao WANG ; Shiqiang ZHANG ; Jinlian HUA
Chinese Journal of Biotechnology 2023;39(1):192-203
As main recipient cells for porcine reproductive and respiratory syndrome virus (PRRSV), porcine alveolar macrophage (PAM) are involved in the progress of several highly pathogenic virus infections. However, due to the fact that the PAM cells can only be obtained from primary tissues, research on PAM-based virus-host interactions remains challenging. The improvement of induced pluripotent stem cells (iPSCs) technology provides a new strategy to develop IPSCs-derived PAM cells. Since the CD163 is a macrophage-specific marker and a validated receptor essential for PRRSV infection, generation of stable porcine induced pluripotent stem cells lines containing CD163 reporter system play important roles in the investigation of IPSCs-PAM transition and PAM-based virus-host interaction. Based on the CRISPR/Cas9- mediated gene editing system, we designed a sgRNA targeting CD163 locus and constructed the corresponding donor vectors. To test whether this reporter system has the expected function, the reporter system was introduced into primary PAM cells to detect the expression of RFP. To validate the low effect on stem cell pluripotency, we generated porcine iPSC lines containing CD163 reporter and assessed the pluripotency through multiple assays such as alkaline phosphatase staining, immunofluorescent staining, and EdU staining. The red-fluorescent protein (RFP) expression was detected in CD163-edited PAM cells, suggesting that our reporter system indeed has the ability to reflect the expression of gene CD163. Compared with wild-type (WT) iPSCs, the CD163 reporter-iPSCs display similar pluripotency-associated transcription factors expression. Besides, cells with the reporter system showed consistent cell morphology and proliferation ability as compared to WT iPSCs, indicating that the edited-cells have no effect on stem cell pluripotency. In conclusion, we generated porcine iPSCs that contain a CD163 reporter system. Our results demonstrated that this reporter system was functional and safe. This study provides a platform to investigate the iPS-PAM development and virus-host interaction in PAM cells.
Swine
;
Animals
;
Induced Pluripotent Stem Cells/metabolism*
;
Receptors, Cell Surface/genetics*
;
Antigens, CD/metabolism*
;
Porcine respiratory and reproductive syndrome virus/genetics*
2.Association of genomic instability of CDH1 gene with clinicopathological characteristics of gastric cancer.
Jitao DU ; Xiangbin WAN ; Huiliang ZHANG ; Jian CAO ; Wen ZHAO ; Zhi LI
Chinese Journal of Medical Genetics 2022;39(11):1279-1282
OBJECTIVE:
To assess the association of genomic instability of epithelial cadherin 1 (CDH1) gene and clinicopathological characteristics of gastric cancer.
METHODS:
In total 120 paraffin-embedded gastric cancer tissue specimen were prepared, and genomic DNA was extracted. The genomic instability of the CDH1 gene was analyzed by immunohistochemistry and silver staining PCR-single-strand conformation polymorphism.
RESULTS:
The number of information individuals (heterozygotes) was 98 for the D16S752 locus. The detection rates for microsatellite instability (MSI) and loss of heterozygosity (LOH) at the D16S752 locus and the positive rate of CDH1 protein were 19.39%, 16.33% and 51.02%, respectively. The detection rate of MSI in TNM stages I or II was significantly higher than that in stages III or IV (P<0.05) while the detection rate of LOH was significantly lower than that in stages III or IV (P<0.05). The positive rate of CDH1 protein in TNM stages III or IV was significantly lower than that in stages I or II (P<0.05). The detection rate of MSI of cases with lymph node metastasis was significantly lower than that of without lymph node metastasis (P<0.05) while the detection rate of LOH was significantly higher than that without lymph node metastasis (P<0.05). The positive rate of CDH1 protein in patients with lymph node metastasis was significantly lower than that in patients without lymph node metastasis (P<0.05). The positive rate of CDH1 protein in MSI-positive group was significantly higher than that in MSI-negative group (P<0.05), and the positive rate of CDH1 protein in the LOH-positive group was significantly lower than that the LOH-negative group (P<0.05).
CONCLUSION
The genomic instability of the CDH1 gene is associated with the progression of gastric cancer. MSI at the D16S752 locus may be used as a molecular marker for early gastric cancer, while LOH at this locus mostly occurs in advanced gastric cancer and can be regarded as an effective indicators for malignancy evaluation and prognosis.
Humans
;
Stomach Neoplasms/pathology*
;
Lymphatic Metastasis
;
Cdh1 Proteins/genetics*
;
Microsatellite Instability
;
Loss of Heterozygosity
;
Genomic Instability
;
Microsatellite Repeats
;
Antigens, CD/genetics*
;
Cadherins/genetics*
3.Association of CDH1, FANCB and APC Gene Polymorphisms with Lung Cancer Susceptibility in Chinese Population.
Lianchun SU ; Hua HUANG ; Min GAO ; Yongwen LI ; Ruifeng SHI ; Chen CHEN ; Xuanguang LI ; Guangsheng ZHU ; Hongyu LIU ; Jun CHEN
Chinese Journal of Lung Cancer 2022;25(9):658-664
BACKGROUND:
Lung cancer is the main cause of cancer-related death globally. Single nucleotide polymorphism (SNP) is one of the important factors leading to the occurrence of lung cancer, but its mechanism has not been elucidated. This study intends to investigate the relationship between SNPs of CDH1, FANCB, APC genes and lung cancer genetic susceptibility.
METHODS:
The case-control study design was used. We collected blood samples from 270 lung cancer cases in the Department of Lung Cancer Surgery, Tianjin Medical University General Hospital, as well as blood samples from 445 healthy volunteers as controls, and extracted genomic DNA for genotyping using the Taqman® SNP genotyping kit. The distribution of three SNP loci of CDH1 gene rs201141645, FANCB gene rs754552650 and APC gene rs149353082 in Chinese population was analyzed. Chi-square test and Logistic regression were used to analyze the relationship between different genotypes and the risk of lung cancer.
RESULTS:
The distribution frequencies of AA, A/G and GG genotypes at rs754552650 of FANCB gene in the control group were 27.2%, 52.6% and 20.2%, respectively. The distribution frequencies of AA and A/G genotypes were 93.7% and 6.3% in the case group, respectively, and no GG genotype was detected. The A/G genotype of the rs754552650 locus of the FANCB gene was significantly different between the case group and the control group. Compared with the carriers of AA genotype, the individuals with FANCB rs754552650 A/G genotype had a lower risk of lung cancer (OR=0.035, 95%CI: 0.020-0.062, P<0.001). CDH1 gene rs201141645 A/C and CC genotypes only existed in the control group. In addition, only 1 sample was found to have APC rs149353082 genotype in the case group.
CONCLUSIONS
In the Chinese population, the lung cancer risk of the individuals with FANCB rs754552650 A/G genotype was significantly decreased.
Antigens, CD/genetics*
;
Cadherins/genetics*
;
Case-Control Studies
;
China
;
Fanconi Anemia Complementation Group Proteins/genetics*
;
Gene Frequency
;
Genes, APC
;
Genetic Predisposition to Disease
;
Genotype
;
Humans
;
Lung Neoplasms/genetics*
;
Polymorphism, Single Nucleotide
4.Inhibition of CD96 enhances interferon-γ secretion by natural killer cells to alleviate lung injury in mice with pulmonary infection.
Jing LI ; Jing ZHENG ; Minda WANG ; Yan ZHANG ; Yifan JIANG ; Xiaofeng ZHANG ; Pu GUO
Journal of Zhejiang University. Medical sciences 2020;40(7):930-935
OBJECTIVE:
To assess the effect of neutralizing CD96 on natural killer (NK) cell functions in mice with pulmonary infection and explore the possible mechanism.
METHODS:
Male BALB/c mice were randomly divided into infection group (Cm group), anti-CD96 treatment group (anti-CD96 group) and control group (=5). In the former two groups, was inoculated intranasal administration to establish mouse models of pulmonary infection, and the mice in the control group received intranasal administration of the inhalation buffer. In anti-CD96 group, the mice were injected with anti-CD96 antibody intraperitoneally at the dose of 250 μg every 3 days after the infection; the mice in Cm group received intraperitoneal injections of saline. The body weight of the mice was recorded daily. The mice were sacrificed 5 days after infection, and CD96 expression was detected by quantitative real-time PCR and Western blotting. HE staining and pathological scores were used to evaluate pneumonia of the mice. The inclusion body forming units (IFUs) were detected in the lung tissue homogenates to assess lung tissue chlamydia load. Flow cytometry and ELISA were used to assess the capacity of the lung NK cells to produce interferon-γ (IFN-γ) and regulate macrophages and Th1 cells.
RESULTS:
infection inhibited CD96 expression in NK cells of the mice. Compared with those in Cm group, the mice in antiCD96 mice showed significantly milder lung inflammation ( < 0.05) and reduced chlamydia load in the lung tissue ( < 0.05). Neutralizing CD96 with anti-CD96 significantly enhanced IFN-γ secretion by the NK cells ( < 0.05) and augmented the immunoregulatory effect of the NK cells shown by enhanced responses of the lung macrophages ( < 0.05) and Th1 cells ( < 0.05).
CONCLUSIONS
Inhibition of CD96 alleviates pneumonia in -infected mice possibly by enhancing IFN-γ secretion by NK cells and augmenting the immunoregulatory effect of the NK cells on innate and adaptive immunity.
Animals
;
Antigens, CD
;
metabolism
;
Chlamydia Infections
;
complications
;
immunology
;
physiopathology
;
Chlamydia muridarum
;
Interferon-gamma
;
genetics
;
metabolism
;
Killer Cells, Natural
;
metabolism
;
Lung Injury
;
etiology
;
genetics
;
prevention & control
;
Male
;
Mice
;
Mice, Inbred BALB C
;
Mice, Inbred C57BL
5.Clinical characteristics and prognostic analysis of pediatric pro-B cell acute lymphoblastic leukemia.
Yu-Juan XUE ; Ai-Dong LU ; Yu WANG ; Yue-Ping JIA ; Ying-Xi ZUO ; Le-Ping ZHANG
Chinese Journal of Contemporary Pediatrics 2020;22(12):1286-1294
OBJECTIVE:
To explore the clinical-biological characteristics and prognosis of pediatric pro-B cell acute lymphoblastic leukemia (pro-B-ALL).
METHODS:
A total of 64 patients aged less than 18 years old with pro-BALL were enrolled. Clinical characteristics, therapeutic effect and prognostic factors were retrospectively analyzed.
RESULTS:
Pro-B-ALL occurred in 6.23% (64/1 028) of pediatric ALL. Among the 64 patients, 35 were male and 29 were female. The median age was 7.0 years (range 0.4-16.0 years) at diagnosis, of which 39% and 6% were ≥ 10 years old and < 1 year old respectively. The median WBC count was 25.5×10
CONCLUSIONS
Pediatric pro-B ALL is a heterogeneous disease with clinical and biological diversity. Biological characteristics, such as immunological markers, genetic alterations, and MRD at 3 months after chemotherapy may be important factors for the long-term prognosis.
Adolescent
;
Antigens, CD/genetics*
;
Child
;
Child, Preschool
;
Disease-Free Survival
;
Female
;
Histone-Lysine N-Methyltransferase/genetics*
;
Humans
;
Infant
;
Male
;
Myeloid-Lymphoid Leukemia Protein/genetics*
;
Neoplasm, Residual/diagnosis*
;
Precursor B-Cell Lymphoblastic Leukemia-Lymphoma/genetics*
;
Prognosis
;
Retrospective Studies
6.Clinical and genetic analysis of three pediatric patients with 15q24 microdeletion syndrome.
Xiangyi JING ; Lei ZHANG ; Ru LI ; Yongling ZHANG ; Fucheng LI ; Cuixing YI ; Can LIAO
Chinese Journal of Medical Genetics 2019;36(7):672-675
OBJECTIVE:
To explore the genetic basis for three patients with development delay and to correlate their clinical phenotypes with genetic findings.
METHODS:
The karyotypes of the probands and their parents were analyzed by conventional G-banding. Chromosomal microarray analysis (CMA) was used to detect microdeletion and microduplication.
RESULTS:
No kartotypic abnormality was detected in the patients and their parents. CMA analysis identified a de novo 3.10 Mb deletion on chromosome 15q24.1q24.2 in case 1, a de novo 3.14 Mb deletion at 15q24.1q24.2 in case 2, and a 3.13 Mb deletion at 15q24.1q24.2 in case 3. All deletions have encompassed the CPLX3,SEMA7A and SIN3A genes.
CONCLUSION
The three patients were diagnosed with 15q24 microdeletion syndrome. CPLX3,SEMA7A and SIN3A may be the key genes responsible for this syndrome.
Adaptor Proteins, Signal Transducing
;
genetics
;
Antigens, CD
;
genetics
;
Child
;
Chromosome Deletion
;
Chromosome Disorders
;
genetics
;
Chromosomes, Human, Pair 15
;
genetics
;
GPI-Linked Proteins
;
genetics
;
Humans
;
Intellectual Disability
;
genetics
;
Repressor Proteins
;
genetics
;
Semaphorins
;
genetics
7.MTBP regulates migration and invasion of prostate cancer cells .
Zhuoyu XIAO ; Mingkun CHEN ; Jiankun YANG ; Cheng YANG ; Xianyuan LÜ ; Hu TIAN ; Cundong LIU
Journal of Southern Medical University 2019;39(1):6-12
OBJECTIVE:
To investigate the role of MTBP in regulating the migration and invasion of human prostate cancer cells.
METHODS:
The baseline expressions of MTBP in 3 different human prostate cancer cells lines (22RV1, DU145 and Lncap) were detected using Western blotting. The cells were transfected with a small interfering RNA (siRNA) for MTBP knockdown or MTBP plasmid for MTBP overexpression, and 48 h later, the cells were examined for MTBP expression with Western blotting; the changes in the migration abilities of the cells were evaluated using wound healing assay and Transwell assay, and the cell invasiveness was assessed using Matrigel Transwell assay. The expression of E-cadherin protein, a marker of epithelial mesenchymal transition (EMT), was detected using Western blotting.
RESULTS:
MTBP expression was the highest in DU145 cells followed by Lncap cells, and was the lowest in 22RV1 cells, indicating a positive correlation of MTBP expression with the level of malignancy of human prostate cancer cells. Transfection of the cells with siRNA or MTBP plasmids efficiently lowered or enhanced the expressions of MTBP in human prostate cancer cells. Wound healing assay showed that inhibition of MTBP expression decreased the migration ability of the prostate cancer cells, and MTBP overexpression significantly promoted the migration of the cells ( < 0.01). Transwell assay showed that MTBP knockdown significantly lowered the migration and invasion ability of the cells, while MTBP overexpression markedly increased the number of migrating and invading cells ( < 0.01); Western blotting results showed that MTBP knockdown increased the expression of E-cadherin protein, and MTBP overexpression decreased E-cadherin expression in the prostate cancer cells.
CONCLUSIONS
MTBP overexpression promotes the migration and invasion of human prostate cancer cells possibly relation to the induction of EMT.
Antigens, CD
;
metabolism
;
Cadherins
;
metabolism
;
Carrier Proteins
;
genetics
;
metabolism
;
Cell Line, Tumor
;
Cell Movement
;
Epithelial-Mesenchymal Transition
;
Gene Expression Regulation, Neoplastic
;
Gene Knockdown Techniques
;
Humans
;
Male
;
Neoplasm Invasiveness
;
Prostatic Neoplasms
;
metabolism
;
pathology
;
RNA, Small Interfering
;
Transfection
8.Transcriptomic microarray profiling of peripheral CD4+ T cells from asthmatic patients.
Min ZHU ; Min HE ; Yarong HE ; Yulin JI
Chinese Journal of Medical Genetics 2018;35(6):828-831
OBJECTIVE:
To identify differentially expressed genes in peripheral blood mononuclear cells between patients with continuous mild-to-moderate asthma and healthy controls using mRNA microarray in order to explore the underlying signaling pathways and clarify the roles of CD4+ T cells in the pathogenesis of asthma.
METHODS:
Global transcriptomic profiles of the CD4+ T cells were defined by using Agilent Sure Print G3 Human GE 8×60K microarray. Enrichment pathways were analyzed with Ingenuity Pathway Analysis (IPA) software.
RESULTS:
Compared with controls, 805 genes were up-regulated, 192 were down-regulated in asthma patients. Among these, the expression of 38 annotated genes have varied by 4 times or more. Expression of CD300A was inversely proportional to the absolute value of eosinophils (r=-0.89, P=0.02) as well as the proportion of eosinophils (r=-0.94, P=0.004), while CSF1R was inversely proportional to PD20 (r=-0.83, P=0.04) and AQLQ (r=-0.88, P=0.02) by correlation analysis.
CONCLUSION
Numerous pathophysiological pathways may be involved in the pathogenesis of asthma. Above findings have provided a basis for the delineation the pathogenesis of asthma.
Antigens, CD
;
genetics
;
Asthma
;
immunology
;
CD4-Positive T-Lymphocytes
;
cytology
;
Case-Control Studies
;
Eosinophils
;
Gene Expression Profiling
;
Humans
;
Leukocytes, Mononuclear
;
Oligonucleotide Array Sequence Analysis
;
Receptors, Granulocyte-Macrophage Colony-Stimulating Factor
;
genetics
;
Receptors, Immunologic
;
genetics
;
Transcriptome
9.SIRT1 participates in epithelial-mesenchymal transition of EC-9706 and Eca-109 cells by regulating Snail expression.
Yuxiang WU ; Dao XIN ; Can LIU ; Feng WANG
Journal of Southern Medical University 2018;38(11):1325-1330
OBJECTIVE:
To explore the role of SIRT1 in the occurrence of epithelial-mesenchymal transition (EMT) in EC-9706 and Eca-109 cells and the possible mechanism.
METHODS:
Three chemically synthesized siRNA targeting SIRT1 were transfected into EC-9706 and Eca-109 cells with the non-transfected cells and cells transfected with the negative siRNAs as controls. Real-time PCR and Western blotting were used to detect the expressions of SIRT1, E-cadherin, vimentin, Snail, Twist1 and ZEB in the cells. Transwell invasion assay and wounding healing assay were used to examine the changes in the invasion and metastasis abilities of the cells after transfection.
RESULTS:
EC-9706 and Eca-109 cells transfected with SIRT1 siRNA1 and SIRT1 siRNA3 showed significantly decreased mRNA and protein expressions of SIRT1 ( < 0.05). Transwell invasion assay and wounding healing assay showed that transfection with SIRT1 siRNA1 and SIRT1 siRNA3 caused significantly lowered invasion and metastasis abilities in EC-9706 and Eca-109 cells ( < 0.05). In EC-9706 and Eca-109 cells transfected with SIRT1 siRNA1 and SIRT1 siRNA3, the expression level of E-cadherin was significantly increased while the expressions of vimentin, Snail and Twist were significantly lowered ( < 0.05).
CONCLUSIONS
SIRT1 participates in the invasion and metastasis of EC-9706 and Eca- 109 cells probably by inducing EMT via regulating the expression of Snail.
Antigens, CD
;
metabolism
;
Cadherins
;
metabolism
;
Cell Line, Tumor
;
Cell Movement
;
Epithelial-Mesenchymal Transition
;
physiology
;
Humans
;
Neoplasm Invasiveness
;
Nuclear Proteins
;
metabolism
;
RNA, Messenger
;
metabolism
;
RNA, Small Interfering
;
metabolism
;
Sirtuin 1
;
genetics
;
metabolism
;
Snail Family Transcription Factors
;
metabolism
;
Transfection
;
Twist-Related Protein 1
;
metabolism
;
Vimentin
;
metabolism
;
Zinc Finger E-box-Binding Homeobox 1
;
metabolism
10.Gene Mutation Spectrum of β-Thalassemia in Dai Ethinic Population of Two Border Region in Chinese Yunnan Province.
Jie ZHANG ; Jing HE ; Xiao-Hong ZENG ; Jie SU ; Hong CHEN ; Yong-Mei XU ; Jian PU ; Bao-Sheng ZHU
Journal of Experimental Hematology 2016;24(1):157-161
OBJECTIVETo investigate the gene mutation spectrum of β-thalassemia in Dai ethnic population of 2 border region in Chinese Yunnan Province.
METHODSThe patients with β-thalassemia in Dai ethnic population of Dehong and Xishuangbanna autonamic prefecture were screened by using blood routine detection and capillary electrophoresis. The β-globin gene mutation in patients with β-thalassemia were detected by using PCR reverse dot-blot hybridization (PCR-RDB), the constitutive rate of gene mutation in patients with β-thalassemia of Dai ethnic population in two border regions was analyzed and compared.
RESULTSA total of 186 patients with gene mutation of β-thalassemia were confirmed. Among them, 10 gene mutation were found, and the 5 main gene mutations were CD26 (62.56%), CD41-42 (18.97%), CD17 (14.36%), CD71-72 (2.05%) and IVS-II-654 (1.54%). Among Dai ethinic population in Dehong region, 4 gene mutations were found including CD26 (80.31%), CD17 (11.02%), CD41-42 (6.30%) and CD71-72 (2.36%). Among Dai ethinic population in Xishuangbanna region, 6 gene mutations were found, out of them the more common gene mutations were CD41-42 (42.64%), CD26 (29.41%) and CD17 (20.59%).
CONCLUSIONThe gene mutations of β-thalassemia in Dai ethinic population of Yunnan province has been confirmed to be more genetic heterogenicity, the spectrums of β-thalassemia mutations in Dai ethinic population of different regions were significant different.
Antigens, CD ; genetics ; Asian Continental Ancestry Group ; China ; DNA Mutational Analysis ; Electrophoresis, Capillary ; Ethnic Groups ; Genetic Therapy ; Humans ; Mutation ; Nucleic Acid Hybridization ; Polymerase Chain Reaction ; beta-Globins ; genetics ; beta-Thalassemia ; ethnology ; genetics

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