1.Identification, characterization, substrate binding mode prediction, and modification of a novel amidohydrolase from Microbulbifer thermotolerans.
Nana XU ; Mingzhu YAN ; Hao WANG ; Xiao LIANG ; Weidong LIU ; Huimin QIN ; Jian GAO
Chinese Journal of Biotechnology 2025;41(9):3567-3578
Ochratoxin A (OTA) is ubiquitous in the food and feed fields. It has strong hepatotoxicity and nephrotoxicity, seriously threatening the health of humans and animals. Enzymatic degradation of mycotoxins is considered to be a promising method to control mycotoxin contaminations. In this study, a new ochratoxin A amidohydrolase from Microbulbifer thermotolerans (MiADH) was obtained. After heterologous expression in Escherichia coli and purification, the recombinant protein was studied regarding the hydrolysis activity, hydrolysis products, enzymatic properties, and substrate binding mode. MiADH can degrade OTA into ochratoxin α (OTα) and phenylalanine, demonstrating a detoxifying ability. It demonstrated the best performance at 70 ℃ and pH 8.0, and Cu2+ had the strongest inhibitory effect on the activity of MiADH. MiADH with good thermal stability exhibited huge potential for industrial application. Rational design guided by three-dimensional structural models and substrate docking analysis revealed the important amino acids affecting substrate binding and obtained multiple mutants with improved activity. Among these mutants, V324A had the highest activity, which was 4.2-fold that of the wild type. The identification of MiADH enriches the ochratoxin A degradation enzyme library and provides a new candidate enzyme for the biological detoxification of ochratoxin A in the food and feed industry.
Amidohydrolases/chemistry*
;
Ochratoxins/metabolism*
;
Substrate Specificity
;
Escherichia coli/metabolism*
;
Recombinant Proteins/metabolism*
;
Actinomycetales/genetics*
2.Purification and characterization of a halophilic urethanase from Klebsiella pneumoniae.
Panpan BU ; Jian CHEN ; Guocheng DU
Chinese Journal of Biotechnology 2014;30(3):404-411
Ethyl carbamate (EC) is a carcinogenic substance in many fermented foods. Enzymatic removal of ethyl carbamate from fermented foods is an important way to eliminate its potential health damage to consumers. To study the enzymatic properties of an ethyl carbamate hydrolase (urethanase) from Klebsiella pneumoniae, a strain isolated from murine somach, we purified the enzyme using ammonium sulfate precipitation, ion exchange chromatography and gel filtration chromatography. The molecular mass of this enzyme was estimated to be 55 kDa by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). Its K(m) was 74 mmol/L when EC was used as the substrate. Moreover, its optimal reaction temperature was 55 degrees C, and the optimum pH was 7.0. The activity was enhanced by ethylene diamine tetraacetic acid (EDTA) and dithiothreitol (DTT), but strongly inhibited by Cu2+ and Zn2+. The enzyme was halophilic and tolerant to low concentration of ethanol. Therefore, it has the potential to remove EC from fermented foods.
Amidohydrolases
;
chemistry
;
isolation & purification
;
Bacterial Proteins
;
chemistry
;
isolation & purification
;
Chromatography, Gel
;
Chromatography, Ion Exchange
;
Electrophoresis, Polyacrylamide Gel
;
Hydrogen-Ion Concentration
;
Klebsiella pneumoniae
;
enzymology
;
Molecular Weight
;
Substrate Specificity
;
Temperature
3.Identify nature N-acylethanolamide-hydrolyzing acid amide (NAAA) inhibitor: effect of angelicae pubescentis radix on anti-inflammation.
Wenchang SUN ; Longhe YANG ; Yan QIU ; Jie REN ; Rui HUANG ; Jin FU
China Journal of Chinese Materia Medica 2011;36(22):3161-3166
OBJECTIVETo investigate the effect of Angelicae Pubescentis Radix (APR) on the activity of endocannabinoid hydrolase and N-acylethanolamine-hydrolyzing acid amidase (NAAA), and to demonstrate the mechanism of anti-inflammatory effect of APR by in vitro lipopolysaccharide (LPS)-induced inflammation model.
METHODAPR essential oil was extracted by steam distillation, and the chemical components were identified by GC-MS. Enzymatic activity was performed by using recombinant NAAA-overexpressing protein and detected by LC-MS. Lipids were extracted by methonal/chloroform mixure and analyzed by LC-MS. mRNA and protein expression levels of proinflammatory genes were examined by Real time-PCR and ELISA assay kit, respectively. The content of nitro oxide (NO) was detected by Griess reaction.
RESULTTwenty active components were identified from APR essential oil which inhibited NAAA activity in a dose-dependent manner. On the LPS-induced RAW264.7 cells, APR essential oil reversed LPS-suppressed N-palmitoylethanolamide (PEA) contents in a dose-dependent manner and reduced LPS-induced proinflammatory genes, TNF-alpha and IL-6. Moreover, APR essential oil reduced the mRNA expression of iNOS, subsequently reduced the release of NO, a classic inflammatory marker.
CONCLUSIONThe research demonstrated that the effect of APR on inflammation is mediated by the inhibition of NAAA activity, which increase the cellular endobioactor PEA levels and decrease proinflammatory factor. The results suggest that APR can serve as a nature NAAA inhibitor.
Amidohydrolases ; antagonists & inhibitors ; Angelica ; chemistry ; Animals ; Anti-Inflammatory Agents ; pharmacology ; Enzyme Inhibitors ; pharmacology ; Lipopolysaccharides ; pharmacology ; Mice ; Oils, Volatile ; analysis ; pharmacology
4.Applications of nitrile converting enzymes in the production of fine chemicals.
Yuguo ZHENG ; Yaping XUE ; Zhiqiang LIU ; Renchao ZHENG ; Yinchu SHEN
Chinese Journal of Biotechnology 2009;25(12):1795-1807
Nitriles are an important type of synthetic intermediates in the production of fine chemicals because of their easy preparations and versatile transformations. The traditional chemical conversion of nitriles to carboxylic acids and amides is feasible but it requires relatively harsh conditions of heat, acid or alkali. Nitrile converting enzymes (nitrilase, nitrile hydratase and amidase) which are used as biocatalyst for the production of fine chemicals have attracted substantial interest because of their ability to convert readily available nitriles into the corresponding higher value amides or acids under mild conditions with excellent chemo-, regio- and stereo-selectivities. Many nitrile converting enzymes have been explored and widely used for the production of fine chemicals. In this paper, various examples of biocatalytic synthesis of pharmaceuticals and their intermediates, agrochemicals and their intermediates, food and feed additives, and other fine chemicals are presented. In the near future, an increasing number of novel nitrile converting enzymes will be screened and their potential in the production of useful fine chemicals will be further exploited.
Amides
;
metabolism
;
Amidohydrolases
;
metabolism
;
Aminohydrolases
;
metabolism
;
Carboxylic Acids
;
metabolism
;
Chemical Industry
;
methods
;
Hydro-Lyases
;
metabolism
;
Nitriles
;
chemistry
5.Differential expression of haemolymph proteome of resistant strain and susceptible strain for BmNPV in Bombyx mori L.
Keya CAI ; Keping CHEN ; Xiaoyong LIU ; Qin YAO ; Jun LI
Chinese Journal of Biotechnology 2008;24(2):285-290
Three model silkworms, highly resistant strain, highly susceptible strain and their near isogenic line were established by hybridization and backcross. The resistance of silkworm (Bombyx mori L.) to BmNPV was studied at proteomic level using two-dimensional gel electrophoresis and MALDI TOF/TOF MS. Differential expression profiles of proteome in resistant strain, susceptible strain and near isogenic line were obtained, and 180, 190 and 187 of protein spots were shown, respectively. Among them, 80% were concentrated in pI 5-9. Twelve differential protein spots in total were obtained from 3 gels. Using MALDI TOF/TOF MS, five proteins, including aminoacylase, were identified from these spots. The exclusive expression of aminoacylase in highly resistant strain and near isogenic line and its absence in susceptible strain suggest that it might be a BmNPV-resistance related protein.
Amidohydrolases
;
analysis
;
genetics
;
Animals
;
Bombyx
;
chemistry
;
genetics
;
virology
;
Electrophoresis, Gel, Two-Dimensional
;
Hemolymph
;
chemistry
;
Host-Pathogen Interactions
;
genetics
;
Insect Proteins
;
analysis
;
Nucleopolyhedrovirus
;
pathogenicity
;
physiology
;
Proteome
;
analysis
;
Proteomics
;
methods
;
Recombination, Genetic
;
Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
6.Studies on the expression, purification and renaturation of recombinant N-acety-L-ornithine deacetylase.
Huan LI ; Yue CHEN ; Qiu-Ping WENG ; Ming-Gang WU ; Ping WEI ; Ping-Kai OUYANG
Chinese Journal of Biotechnology 2007;23(3):487-492
The argE gene from Escherichia coli coding for N-acety-L-ornithine deacetylase(NAOase), the key enzyme involved in the L-arginine biosynthesis, had been cloned in pET22b and transformed into BL21 (DE3). With 32.5% expression level in the optimal fermentation medium at 37 degrees C, most NAOase was expressed as inclusion bodies. The soluble and active proportion could be slightly increased when expressed at low temperature. The specific activity of soluble NAOase purified by Ni-NTA resin chromatography was 1193.2u/mg. The species and proportions of whole cell proteins varied with induction conditions. The inclusion bodies expressed at 37 degrees C was more pure than 22 degrees C after gradient wash with urea. Inclusion bodies could be partly refolding and reactivated by dilution and dialysis. Low protein concentration and suitable rate of oxidant/reducing agents were important to renaturation. In the optimal conditions 17.78% of Urea-denatured NAOase could be refolding and reactivated by dilution. The purified fusion protein was obtained after wash, solubilization and Ni-NTA resin affinity chromatography purification of inclusion bodies.
Amidohydrolases
;
chemistry
;
genetics
;
metabolism
;
Biocatalysis
;
drug effects
;
Electrophoresis, Polyacrylamide Gel
;
Escherichia coli
;
enzymology
;
genetics
;
Escherichia coli Proteins
;
genetics
;
metabolism
;
Gene Expression Regulation, Bacterial
;
Gene Expression Regulation, Enzymologic
;
Inclusion Bodies
;
enzymology
;
Protein Folding
;
drug effects
;
Recombinant Proteins
;
chemistry
;
isolation & purification
;
metabolism
;
Urea
;
pharmacology
7.A Study on Altered Expression of Serine Palmitoyltransferase and Ceramidase in Psoriatic Skin Lesion.
Kyung Kook HONG ; Hee Ryung CHO ; Won Chul JU ; Yunhi CHO ; Nack In KIM
Journal of Korean Medical Science 2007;22(5):862-867
Ceramides are the main lipid component maintaining the lamellae structure of stratum corneum, as well as lipid second messengers for the regulation of cellular proliferation and/or apoptosis. In our previous study, psoriatic skin lesions showed marked decreased levels of ceramides and signaling molecules, specially protein kinase C-alpha (PKC-alpha) and c-jun N-terminal kinase (JNK) in proportion to the psoriasis area and severity index (PASI) scores, which suggested that the depletion of ceramide is responsible for epidermal hyperproliferation of psoriasis via downregulation of proapoptotic signal cascade such as PKC-alpha and JNK. In this study, we investigated the protein expression of serine palmitoyltransferase (SPT) and ceramidase, two major ceramide metabolizing enzymes, in both psoriatic epidermis and non-lesional epidermis. The expression of SPT, the ceramide generating enzyme in the de novo synthesis in psoriatic epidermis, was significantly less than that of the non-lesional epidermis, which was inversely correlated with PASI score. However, the expression of ceramidase, the degradative enzyme of ceramides, showed no significant difference between the lesional epidermis and the non-lesional epidermis of psoriatic patients. This might suggest that decreased expression of SPT protein is one of the important causative factors for decreased ceramide levels in psoriasis.
Adolescent
;
Adult
;
Amidohydrolases/*biosynthesis/metabolism
;
Apoptosis
;
Cell Proliferation
;
Ceramidases
;
Ceramides/chemistry
;
Child
;
Epidermis/metabolism
;
Female
;
Humans
;
JNK Mitogen-Activated Protein Kinases/metabolism
;
Male
;
Models, Biological
;
Protein Kinase C-alpha/metabolism
;
Psoriasis/*blood/diagnosis
;
Serine C-Palmitoyltransferase/*biosynthesis
8.Effect of puerarin on ADMA-DDAH system in human umbilical vein endothelial cells cultured with oxidized free radical.
Ju-Xiang LI ; Jing CHEN ; Zhi-Hua DENG
Chinese Journal of Integrated Traditional and Western Medicine 2006;26(12):1103-1106
OBJECTIVETo observe the effects of puerarin on activity of dimethylarginine dimethylaminohydrolase (DDAH) in human umbilical vein endothelial cells (HUVECs) cultured with oxidized free radical (OFR), to explore the effect of puerarin on metabolic mechanism of asymmetric dimethylarginine (ADMA).
METHODSHUVECs of the 3rd - 6th passage cultured with modified Jaffe's method were divided into 4 groups, the blank control group cultured with DMEM medium, the OFR group cultured with DMEM medium containing 0.1 mmol of OFR per liter, the puerarin group 1 and 2 cultured with DMEM medium containing 0.1 mmol of OFR per liter as well as 0.5 mg/ml and 1.0 mg/ml of puerarin respectively. After being incubated for 24 h, activity of nitric oxide synthase (NOS), contents of nitric oxide (NO), ADMA, endothelin (ET), and L-citrulline (L-cit) in the supernate were measured, and DDAH protein expression in the lysate was detected by Western blotting.
RESULTSCompared with those in the blank control group, ADMA and ET contents were higher, while the levels of NO and L-cit and the activity of NOS were lower markedly, but the DDAH expression changed insignificantly in the OFR group. These abnormalities were restored significantly in the puerarin groups.
CONCLUSIONThe increase of ADMA in OFR injured HUVECs was correlated with the reduction of DDAH activity and irrelevant to DDAH expression. Puerarin could promote ADMA metabolism through increasing DDAH activity, and improve NOS activity, thus to reduce the impairing of OFR on endothelial function.
Amidohydrolases ; metabolism ; Arginine ; analogs & derivatives ; metabolism ; Blotting, Western ; Cells, Cultured ; Culture Media ; Endothelial Cells ; cytology ; drug effects ; metabolism ; Endothelins ; metabolism ; Free Radicals ; chemistry ; pharmacology ; Humans ; Isoflavones ; pharmacology ; Nitrates ; metabolism ; Nitric Oxide ; metabolism ; Nitric Oxide Synthase ; metabolism ; Nitrites ; metabolism ; Oxidation-Reduction ; drug effects ; Umbilical Veins ; cytology
9.Molecular cloning of an amidase gene from Nocardia sp. and its expressionin Escherichia coli.
Mi XU ; Hui-Min YU ; Tian-Wei TAN ; Yan-Qin ZHU ; Zhong-Yao SHEN
Chinese Journal of Biotechnology 2006;22(4):682-685
The amidase of Nocardia sp. is one of important industrial enzymes. Based on DNA and protein sequence alignment from different strains, a new gene of amidase was successfully cloned from Nocardia YS-2002, which is widely used for industrial production of acrylamide in China. DNA sequence analyses showed that the 1466bp cloned-fragment contains promoter, open reading frame and terminating-palindrome. Protein sequence alignment and phylogenetic tree analyses showed that the amidase coming from Nocardia sp. YS-2002 is a kind of specialamidase, without the typical conserved sequence of the amidases. Enzymatic characteristics predictions indicated that the molecular weight and pI of the new amidase is approximately 38.05 kD and 4.88, respectively, and it would be stable when heterogeneously expressed in E. coli. By inserting the ORF of the amidase into plasmid pET-28a(+), a recombinant strain, pEAB, was selected using E. coli BL21(DE3) as the host. SDS-PAGE analyses of both the whole cells and ultrasonic-treated cells confirmed the feasibility of the heterogeneous expression of amidase in the recombinant E. coli. But the activity of amidase in E. coli BL21(DE3) not more than 0.5 u/mg, because most of the enzymes expressed were formed as inclusion bodies.
Amidohydrolases
;
chemistry
;
genetics
;
Cloning, Molecular
;
Escherichia coli
;
genetics
;
Molecular Weight
;
Nocardia
;
enzymology
;
Phylogeny

Result Analysis
Print
Save
E-mail