1.Genetic Diversity, Antibiotic Resistance, and Pathogenicity of Aeromonas Species from Food Products in Shanghai, China.
Feng Tian QU ; Wen Qing WANG ; Qian LIU ; Hai Jian ZHOU ; Jin Rui HU ; Xiao Li DU ; Yue WANG ; Jia Qi XUE ; Zhi Gang CUI ; Gui Lin XIE ; Shuang MENG
Biomedical and Environmental Sciences 2022;35(9):842-853
OBJECTIVE:
Aeromonas has recently been recognized as an emerging human pathogen. Aeromonas-associated diarrhea is a phenomenon occurring worldwide. This study was designed to determine the prevalence, genetic diversity, antibiotic resistance, and pathogenicity of Aeromonas strains isolated from food products in Shanghai.
METHODS:
Aeromonas isolates ( n = 79) collected from food samples were analyzed using concatenated gyrB- cpn60 sequencing. The antibiotic resistance of these isolates was determined using antimicrobial susceptibility testing. Pathogenicity was assessed using β-hemolytic, extracellular protease, virulence gene detection, C. elegans liquid toxicity (LT), and cytotoxicity assays.
RESULTS:
Eight different species were identified among the 79 isolates. The most prevalent Aeromonas species were A. veronii [62 (78.5%)], A. caviae [6 (7.6%)], A. dhakensis [3 (3.8%)], and A. salmonicida [3 (3.8%)]. The Aeromonas isolates were divided into 73 sequence types (STs), of which 65 were novel. The isolates were hemolytic (45.6%) and protease-positive (81.0%). The most prevalent virulence genes were act (73.4%), fla (69.6%), aexT (36.7%), and ascV (30.4%). The results of C. elegans LT and cytotoxicity assays revealed that A. dhakensis and A. hydrophila were more virulent than A. veronii, A. caviae, and A. bivalvium. Antibiotic resistance genes [ tetE, blaTEM, tetA, qnrS, aac(6)-Ib, mcr -1, and mcr-3] were detected in the isolates. The multidrug-resistance rate of the Aeromonas isolates was 11.4%, and 93.7% of the Aeromonas isolates were resistant to cefazolin.
CONCLUSION
The taxonomy, antibiotic resistance, and pathogenicity of different Aeromonas species varied. The Aeromonas isolates A. dhakensis and A. hydrophila were highly pathogenic, indicating that food-derived Aeromonas isolates are potential risks for public health and food safety. The monitoring of food quality and safety will result in better prevention and treatment strategies to control diarrhea illnesses in China.
Aeromonas/genetics*
;
Animals
;
Anti-Bacterial Agents/pharmacology*
;
Caenorhabditis elegans
;
Cefazolin
;
China/epidemiology*
;
Diarrhea
;
Drug Resistance, Multiple, Bacterial/genetics*
;
Genetic Variation
;
Humans
;
Peptide Hydrolases/genetics*
;
Virulence/genetics*
2.Comparative Study of the Genetic Diversity, Antimicrobial Resistance, and Pathogenicity of
Shuang MENG ; Xiao Li DU ; Yong Lu WANG ; Feng Tian QU ; Gui Lin XIE ; Hai Jian ZHOU ; Jin Rui HU ; Zheng QIN ; Yue WANG ; Biao KAN ; Zhi Gang CUI
Biomedical and Environmental Sciences 2021;34(6):454-464
Objective:
This study was performed to compare the genetic diversity, virulence, and antimicrobial resistance of
Methods:
A total of 38 clinical strains and 19 strains from healthy individuals were isolated from the samples collected in Ma'anshan City, Anhui Province. Their taxonomy was investigated using concatenated
Results:
The 57
Conclusions
The taxonomy, virulence properties, and antibiotic resistance of
Aeromonas/pathogenicity*
;
Case-Control Studies
;
Drug Resistance, Bacterial/genetics*
;
Genetic Variation
;
Humans
;
Virulence Factors/genetics*
3.Genetic Diversity, Antimicrobial Resistance, and Virulence Genes of Isolates from Clinical Patients, Tap Water Systems, and Food.
Shuang MENG ; Yong Lu WANG ; ChenGeng LIU ; Jing YANG ; Min YUAN ; Xiang Ning BAI ; Dong JIN ; Jun Rong LIANG ; Zhi Gang CUI ; Juan LI
Biomedical and Environmental Sciences 2020;33(6):385-395
Objective:
This study aimed to evaluate the genetic diversity, virulence, and antimicrobial resistance of isolates from clinical patients, tap water systems, and food.
Methods:
Ninety isolates were obtained from Ma'anshan, Anhui province, China, and subjected to multi-locus sequence typing (MLST) with six housekeeping genes. Their taxonomy was investigated using concatenated sequences, while their resistance to 12 antibiotics was evaluated. Ten putative virulence factors and several resistance genes were identified by PCR and sequencing.
Results:
The 90 isolates were divided into 84 sequence types, 80 of which were novel, indicating high genetic diversity. The isolates were classified into eight different species. PCR assays identified virulence genes in the isolates, with the enterotoxin and hemolysin genes , , , and found in 47 (52.2%), 13 (14.4%), 22 (24.4%), and 12 (13.3%) of the isolates, respectively. The majority of the isolates (≥ 90%) were susceptible to aztreonam, imipenem, cefepime, chloramphenicol, gentamicin, tetracycline, and ciprofloxacin. However, several resistance genes were detected in the isolates, as well as a new variant.
Conclusions
Sequence type, virulence properties, and antibiotic resistance vary in isolates from clinical patients, tap water systems, and food.
Aeromonas
;
drug effects
;
genetics
;
isolation & purification
;
pathogenicity
;
Anti-Bacterial Agents
;
pharmacology
;
China
;
Drinking Water
;
microbiology
;
Drug Resistance, Bacterial
;
Food Microbiology
;
Genetic Variation
;
Gram-Negative Bacterial Infections
;
microbiology
;
Species Specificity
;
Virulence
4.Expression of MHCⅠ genes in different tissues of Rana dybowskii under the stress of Aeromonas hydrophila.
Ruofei BIAN ; Xiao XU ; Yufen LIU ; Peng LIU ; Wenge ZHAO
Chinese Journal of Biotechnology 2020;36(7):1323-1333
The aim of this study was to investigate the expression of MHCⅠ gene in different tissues of Rana dybowskii under the stress of Aeromonas hydrophila (Ah), and to provide evidence for revealing the anti-infective immune response mechanism of amphibians. The experimental animal model of Aeromonas hydrophila infection was first constructed, and the pathological changes were observed by HE staining. The MHCⅠ gene α1+α2 peptide binding region of Rana dybowskii was cloned by RT-PCR and analyzed by bioinformatics. Real-time PCR was used to detect the transcription level of MHCⅠ in different tissues under Ah stress. After Ah infection, the skin, liver and muscle tissues showed signs of cell structure disappearance and texture disorder. The MHCⅠ gene α1+α2 peptide binding region fragment was 494 bp, encoding 164 amino acids, and homology with amphibians. Above 77%, the homology with mammals was as low as 14.96%, indicating that the α1+α2 region of MHC gene was less conserved among different species. The results of real-time PCR show that the liver, spleen and kidney of the experimental group were under Ah stress. The transcript levels of MHCⅠ gene in skin and muscle tissues were higher than those in the control group at 72 h, but the time to peak of each tissue was different (P<0.01), indicating that the response time of MHCⅠ gene in different tissues was different under Ah stress. This study provides a reference for further exploring the immune function of MHC molecules in anti-infection.
Aeromonas hydrophila
;
Animals
;
Gene Expression Profiling
;
Gene Expression Regulation
;
immunology
;
Gram-Negative Bacterial Infections
;
immunology
;
Liver
;
metabolism
;
Ranidae
;
genetics
;
immunology
;
microbiology
;
Skin
;
metabolism
5.Infection status and virulent genes of Aeromonas in diarrhea patients in Pudong New Area, Shanghai.
Wenqing WANG ; Duochun WANG ; Linying ZHU ; Yifei FU ; Lipeng HAO ; Xuebin XU ; Jinghua SU ; Huiqin FU ; Chuchu YE ; Qiao SUN ; Yingjie ZHENG
Chinese Journal of Epidemiology 2016;37(3):402-405
OBJECTIVETo investigate the infection status and virulent genes of Aeromonas in patients with acute diarrhea in Pudong New Area, Shanghai.
METHODSIn 2012, stool samples were collected from diarrhea patients in 12 sentinel hospitals in Pudong for the detections of 13 pathogens causing diarrhea, and the detections of 5 diarrhea related virulent genes were conducted for Aeromonas isolates.
RESULTSA total of 101 patients were infected with Aeromonas in 2533 patients (4.0%). A total of 101 Aeromonas strains were isolated, including 17 Aeromonas hydrophila strains (18.8%), 44 Aeromonas veronii biovar sobria strains (52.5%) and 12 Aeromonas caviae strains (29.7%). And 44 coinfections with other pathogens were detected. Aeromonas infection mainly occurred in summer and in people aged ≥20 years. Among the patients infected with Aeromonas, 71 (70.3%) had watery diarrhea, 20 (19.8%) had vomiting and 11 (10.9%) had fever. Virulent genes detection showed that 95.0% of the Aeromonas. strains carried virulent genes, and the detection rates of hlyA, aerA, act, alt, and ast genes were 5.9%, 6.9%, 67.3%, 42.6% and 13.9%, respectively.
CONCLUSIONSHigh incidence of Aeromonas infection was found in the patients with acute diarrhea in Pudong, and a high proportion of coinfections with other pathogens was detected too. Most Aeromonas strains carried virulent genes, and the distribution varied.
Aeromonas ; genetics ; Aeromonas hydrophila ; genetics ; China ; epidemiology ; Diarrhea ; microbiology ; Gram-Negative Bacterial Infections ; epidemiology ; microbiology ; Humans ; Seasons ; Virulence ; genetics ; Young Adult
6.Comparison of MALDI-TOF MS, Housekeeping Gene Sequencing, and 16S rRNA Gene Sequencing for Identification of Aeromonas Clinical Isolates.
Hee Bong SHIN ; Jihoon YOON ; Yangsoon LEE ; Myung Sook KIM ; Kyungwon LEE
Yonsei Medical Journal 2015;56(2):550-555
PURPOSE: The genus Aeromonas is a pathogen that is well known to cause severe clinical illnesses, ranging from gastroenteritis to sepsis. Accurate identification of A. hydrophila, A. caviae, and A. veronii is important for the care of patients. However, species identification remains difficult using conventional methods. The aim of this study was to compare the accuracy of different methods of identifying Aeromonas at the species level: a biochemical method, matrix-assisted laser desorption ionization mass spectrometry-time of flight (MALDI-TOF MS), 16S rRNA sequencing, and housekeeping gene sequencing (gyrB, rpoB). MATERIALS AND METHODS: We analyzed 65 Aeromonas isolates recovered from patients at a university hospital in Korea between 1996 and 2012. The isolates were recovered from frozen states and tested using the following four methods: a conventional biochemical method, 16S rRNA sequencing, housekeeping gene sequencing with phylogenetic analysis, and MALDI-TOF MS. RESULTS: The conventional biochemical method and 16S rRNA sequencing identified Aeromonas at the genus level very accurately, although species level identification was unsatisfactory. MALDI-TOF MS system correctly identified 60 (92.3%) isolates at the species level and an additional four (6.2%) at the genus level. Overall, housekeeping gene sequencing with phylogenetic analysis was found to be the most accurate in identifying Aeromonas at the species level. CONCLUSION: The most accurate method of identification of Aeromonas to species level is by housekeeping gene sequencing, although high cost and technical difficulty hinder its usage in clinical settings. An easy-to-use identification method is needed for clinical laboratories, for which MALDI-TOF MS could be a strong candidate.
Aeromonas/classification/*genetics/isolation & purification
;
DNA, Bacterial/genetics
;
Genes, Essential/*genetics
;
Humans
;
Molecular Typing/*methods
;
Phylogeny
;
RNA, Ribosomal, 16S/*genetics
;
Republic of Korea
;
Sensitivity and Specificity
;
Sequence Analysis, DNA/*methods
;
Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/*methods
7.Study on membrane injury mechanism of total alkaloids and berberine from Coptidis Rhizoma on Aeromonas hydrophila.
Dong-fang XUE ; Zong-yao ZOU ; Biao CHEN ; Yan-zhi WANG ; Hao WU ; Xiao-li YE ; Xue-gang LI
China Journal of Chinese Materia Medica 2015;40(9):1787-1792
To explore the antibacterial activity and mechanism of total alkaloids and berberine from Coptidis Rhizoma on Aeromonas hydrophila, and determine the effect of total alkaloids and berberine from Coptidis Rhizoma on minimum inhibitory concentrations, permeability and fluidity of cell membrane, conformation of membrane proteins and virulence factors of A. hydrophila. The results showed that both total alkaloids and berberine from Coptidis Rhizoma had antibacterial activities on A. hydrophila, with minimum inhibitory concentrations of 62.5 and 125 mg · L(-1), respectively. Total alkaloids and berberine from Coptidis Rhizoma could increase the fluidity of membrane, change the conformation of membrane porteins and increase the permeability of bacteria membrane by 24.52% and 19.66%, respectively. Besides, total alkaloids and berberine from Coptidis Rhizoma significantly decreased the hemolysis of exotoxin and the mRNA expressions of aerA and hlyA (P < 0.05, P < 0.01), the secretion of endotoxin and the mRNA expression of LpxC (P < 0.05, P < 0.01). The results suggested that the antibacterial activity of total alkaloids and berberine from Coptidis Rhizoma on A. hydrophila may be related to the bacteria membrane injury. They inhibited the bacterial growth by increasing membrane lipid fluidity and changing conformation of membrane proteins, and reduced the secretion of virulence factors of A. hydrophila to weaken the pathogenicity.
Aeromonas hydrophila
;
drug effects
;
genetics
;
metabolism
;
Alkaloids
;
pharmacology
;
Anti-Bacterial Agents
;
pharmacology
;
Bacterial Proteins
;
genetics
;
metabolism
;
Bacterial Toxins
;
biosynthesis
;
Berberine
;
pharmacology
;
Cell Membrane
;
drug effects
;
genetics
;
metabolism
;
Coptis
;
chemistry
;
Drugs, Chinese Herbal
;
pharmacology
;
Membrane Fluidity
;
drug effects
;
Rhizome
;
chemistry
8.Application of high efficiency promoters in microbial production of 4-hydroxybutyric acid.
Qin ZHOU ; Jinchun CHEN ; Guoqiang CHEN
Chinese Journal of Biotechnology 2012;28(1):48-55
4-Hydroxybutyric acid (4HB) is a psychotropic drug used for polymer synthesis such as poly (4-hydroxybutyric acid) (P4HB) and poly (3-hydroxybutyric acid-co-4-hydroxybutyric acid) (P3HB-co-4HB). 1,4-butanediol (BD) can be converted to 4-hydroxybutyric acid by alcohol dehydrogenase (DhaT) and aldehyde dehydrogenase (AldD). In this study, high efficiency promoters including T7 promoter and P(Re) promoter were cloned to increase expression of dhaT and aldD, and thus accelerate the conversion from BD to 4HB. A. hydrophila 4AK4 (pZQ01), the recombinant strain under the control of T7 promoter, produced 6.00 g/L 4HB from 10 g/L BD with the productivity increased by 43.20%. While A. hydrophila 4AK4 (pZQ04), the strain under the control of T7 promoter, produced 4.87 g/L 4HB from 10 g/L BD, and the productivity was increased by 16.23%. Thus, the gene expression was increased by T7 and P(Re) promoters, leading to an accelerated biosynthesis of 4HB.
Aeromonas hydrophila
;
genetics
;
metabolism
;
Genetic Engineering
;
Hydroxybutyrates
;
metabolism
;
Promoter Regions, Genetic
;
genetics
;
Recombination, Genetic
9.Molecular characterization of tetracycline- and quinolone-resistant Aeromonas salmonicida isolated in Korea.
Ji Hyung KIM ; Sun Young HWANG ; Jee Soo SON ; Jee Eun HAN ; Jin Woo JUN ; Sang Phil SHIN ; Casiano CHORESCA ; Yun Jaie CHOI ; Yong Ho PARK ; Se Chang PARK
Journal of Veterinary Science 2011;12(1):41-48
The antibiotic resistance of 16 Aeromonas (A.) salmonicida strains isolated from diseased fish and environmental samples in Korea from 2006 to 2009 were investigated in this study. Tetracycline or quinolone resistance was observed in eight and 16 of the isolates, respectively, based on the measured minimal inhibitory concentrations. Among the tetracycline-resistant strains, seven of the isolates harbored tetA gene and one isolate harbored tetE gene. Additionally, quinolone-resistance determining regions (QRDRs) consisting of the gyrA and parC genes were amplified and sequenced. Among the quinolone-resistant A. salmonicida strains, 15 harbored point mutations in the gyrA codon 83 which were responsible for the corresponding amino acid substitutions of Ser83-->Arg83 or Ser83-->Asn83. We detected no point mutations in other QRDRs, such as gyrA codons 87 and 92, and parC codons 80 and 84. Genetic similarity was assessed via pulsed-field gel electrophoresis, and the results indicated high clonality among the Korean antibiotic-resistant strains of A. salmonicida.
Aeromonas salmonicida/classification/*drug effects/*genetics/i
;
Animals
;
Anti-Bacterial Agents/*pharmacology
;
Bacterial Proteins/genetics
;
*Drug Resistance, Bacterial
;
Environment
;
Fish Diseases/*microbiology
;
Fishes
;
Gram-Negative Bacterial Infections/microbiology/*veterinary
;
Microbial Sensitivity Tests
;
Point Mutation
;
Polymerase Chain Reaction
;
Quinolones/*pharmacology
;
Republic of Korea
;
Sequence Analysis
;
Tetracycline/*pharmacology
;
Tetracycline Resistance
10.Development and evaluation of a multiplex PCR assay for simultaneous detection of Flavobacterium psychrophilum, Yersinia ruckeri and Aeromonas salmonicida subsp. salmonicida in culture fisheries.
Ertan Emek ONUK ; Alper CIFTCI ; Arzu FINDIK ; Yuksel DURMAZ
Journal of Veterinary Science 2010;11(3):235-241
Bacterial cold water disease, enteric red mouth disease and frunculosis are the common bacterial diseases of fish worldwide. The etiologic agents of these diseases are Flavobacterium (F.) psychrophilum, Yersinia (Y.) ruckeri and Aeromonas (A.) salmonicida subsp. salmonicida, respectively. In this study, a multiplex polymerase chain reaction (m-PCR) method with YER8/10-Fer3/4-FP1/3 primer pairs which can identify these fish pathogens simultaneously was developed and optimized. In optimized conditions, neither false specific nor nonspecific amplification occurred. The detection limits of the m-PCR method using DNA extracts from dilutions of pure cultures of bacteria were 35 pg for Y. ruckeri and F. psychrophilum and 70 pg for A. salmonicida subsp. salmonicida. It was determined that 15 CFU Y. ruckeri and F. psychrophilum and 30 CFU A. salmonicida subsp. salmonicida could be detected by m-PCR developed using genomic DNA extracted from dilutions of the suspensions. The detection limits in the presence of tissue debris were 125 CFU for Y. ruckeri and F. psychrophilum and 250 CFU for A. salmonicida subsp. salmonicida. In conclusion, we submit that the m-PCR method developed and optimized in this study can be used for accurate and rapid identification of these bacteria.
Aeromonas salmonicida/*genetics
;
Animals
;
DNA Primers/genetics
;
Fish Diseases/*diagnosis/*microbiology
;
Fishes
;
Flavobacterium/*genetics
;
Gram-Negative Bacterial Infections/diagnosis/*veterinary
;
Polymerase Chain Reaction/methods/*veterinary
;
Yersinia rucker/*genetics

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