1.Influence of hybridization probe capture and amplicon library construction methods on HLA genotyping resolution level
Xiaoni YUAN ; Tengteng ZHANG ; Yang LI ; Xue JIANG ; Tianjie YANG ; Xiaojing BAO ; Jun HE
Chinese Journal of Blood Transfusion 2025;38(3):303-308
[Objective] To compare next generation sequencing (NGS) library construction technology between probe hybridization capture and amplicon methods, and analyze the influencing factors of HLA genotyping resolution level and its prospects in clinical applications. [Methods] A total of 207 clinical samples with known typing results and samples from the proficiency testing plan were selected. The conformity rate of HLA genotyping results, allele coverage and typing data analysis indicators were confirmed, and the effects of two library construction methods on the level of HLA genotyping discrimination were compared. [Results] The concordance rate of 207 samples with the feedback results of PT or prior well-characterized HLA genotypes was 100%. Among them, 91 samples were captured using hybridization probe capture method. Compared with the original amplicon method, the hybridization probe capture method can distinguish the alleles of DRB1 and DPB1 that cannot be determined in 13 samples. The allelic imbalance of DRB1, DPA1, and DQB1 loci in 6 samples was resolved. Three samples were found to have missed detection of alleles at the DQA1 and DQB1 loci. [Conclusion] The performance indicators of hybridization probe capture and amplicon performance confirmation meet the requirements of clinical detection of HLA genotyping, which provides an experimental method and basis for clinical application.
2.Comprehensive reconstruction of gradeⅠ-Ⅱdigital defects with hallux osteo-onychocutaneous flap of great toe: a report of 9 cases
Gangyi LIU ; Jie ZHANG ; Weichao YANG ; Chunxu WANG ; Jianmei LI ; Chunlong XI ; Xiaoni LI ; Yalan YAN ; Zhimin ZHANG
Chinese Journal of Microsurgery 2025;48(4):388-393
Objective:To observe the clinical effect of comprehensive reconstruction of grades Ⅰ-Ⅱ thumb and finger defects with hallux osteo-onychocutaneous flaps of great toe.Methods:This is a retrospective study. From June 2020 to December 2023, comprehensive reconstruction surgery for Grade Ⅰ-Ⅱ digital defect were performed with hallux osteo-onychocutaneous flaps of great toe for 3 thumbs and 7 fingers in 9 patients in the Department of Hand and Microsurgery of Baoji Third Hospital. Causes of digital injury were: 4 of machine crush, 3 of electric saw cut, 1 of door crush, and 1 of electrical burn. There were 6 grade I digital defects (beyond the nail root) and 4 grade Ⅱ defects (last segment of digit). The defects of the digits were reconstructed by taking references of the shape and structure of the contralateral normal thumbs and fingers. Then the hallux osteo-onychocutaneous flaps of great toe were designed and harvested accordingly from the left and right great toes. Donor sites were covered by skin grafting or local dressing change. One patient was treated in emergency surgery, 6 in sub-emergency surgery and 2 in elective surgery. Integrated perioperative patient management was provided to all of the patients. Postoperative follow-ups were conducted through the visit of outpatient clinic, telephone calls or WeChat interviews. Flap survival, appearance and sensation recovery were evaluated according to the Evaluation Standard of Upper Limb Functional of Hand Surgery of Chinese Medical Association.Results:Vascular insufficiency of 1 digit occurred in surgery, and relieved by local treatment with lidocaine and warm saline. All 10 digits successfully survived, and all donor sites healed spontaneously. The postoperative follow-up period was 10 to 30 months, with an average of 18 months. One transferred nail was found in poor appearance (not flat), the rest of the reconstructed digits were good in appearance and function. The nail, finger print and fine sensation (TPD 5~8 mm), as well as digital flexion, extension, grasping and opposition of the reconstructed digits were all good. According to the Evaluation Standard of Upper Limb Functional of Hand Surgery of Chinese Medical Association, at the last follow-up visit, 5 digits were in excellent, 4 in good and 1 in fair.Conclusion:The comprehensive reconstruction of grades Ⅰ-Ⅱ digital defects with hallux osteo-onychocutaneous flap of great toe is an ideal surgical technique that can reconstruct the nail, finger print and sensation of a digit, with good postoperative function as well as an aesthetic and realistic appearance.
3.miR-200a inhibits formation of primary cilia and decreases X-ray-induced apoptosis resistance in rat cardiac fibroblasts
Li MA ; Xiaoni MA ; Songbo FU ; Chengxu MA
Chinese Journal of Pathophysiology 2025;41(10):1920-1925
AIM:To investigate the effects of microRNA-200a(miR-200a)on the formation of primary cilia and the apoptosis in X-ray-injured cardiac fibroblasts.METHODS:Hearts were isolated from neonatal Wistar rats and di-gested with trypsin.Cardiac fibroblasts were isolated,irradiated with 1 Gy of X-ray,and subsequently transfected with miR-200a-3p mimic or si-IFT88.Primary cilia were detected by immunofluorescence staining,and tranfoming growth fac-tor-β1(TGF-β1)in the culture medium was detected by ELISA.The viability of cardiac fibroblasts was detected by CCK-8.The mRNA expression of tumor necrosis factor-α(TNF-α)and caspase-3 was detected by RT-qPCR,and the protein expression of TNF-α,caspase-3,collagen type I α1 chain(Col1α1)and TGF-β1 was detected by Western blot.RE-SULTS:Compared with control group,X-ray irradiation significantly decreased the expression of miR-200a-3p and the level of apoptosis,but increased the proportion of cells with primary cilia,the length of primary cilia and the viability of cardiac fibroblasts.Compared with X-ray group,the percentage of apoptotic cardiac fibroblasts in si-IFT88 group was in-creased.Compared with X-ray group,the proportion of cells with primary cilia and the TGF-β1 content in cardiac fibro-blasts were reduced,and the proportion of apoptotic cells increased in miR-200a-3p overexpression group.CONCLU-SION:X-ray-induced down-regulation of miR-200a-3p in neonatal rat cardiac fibroblasts drives the formation of primary cilia and suppresses the apoptosis.
4.Patient-derived xenograft model: Applications and challenges in liver cancer.
Shuangshuang DOU ; Yunfei HUO ; Minghui GAO ; Quanwei LI ; Buxin KOU ; Mengyin CHAI ; Xiaoni LIU
Chinese Medical Journal 2025;138(11):1313-1323
Liver cancer is one of the most common malignant tumors worldwide. Currently, the available treatment methods cannot fully control its recurrence and mortality rate. Establishing appropriate animal models for liver cancer is crucial for developing new treatment technologies and strategies. The patient-derived xenograft (PDX) model preserves the tumor's microenvironment and heterogeneity, which makes it advantageous for biological research, drug evaluation, personalized medicine, and other purposes. This article reviews the development, preparation techniques, application fields, and challenges of PDX models in liver cancer, providing insights for the research and exploration of PDX models in diagnostic and therapeutic strategies of liver cancer.
Liver Neoplasms/drug therapy*
;
Animals
;
Humans
;
Xenograft Model Antitumor Assays/methods*
;
Mice
;
Disease Models, Animal
5.Factors affecting tumorigenicity in liver cancer xenografts
Mengyin CHAI ; Shuangshuang DOU ; Buxin KOU ; Yunfei HUO ; Minghui GAO ; Quanwei LI ; Xiaoni LIU
Chinese Journal of Hepatology 2025;33(3):248-254
Objective:To establish a tumor tissue xenograft (PDX) model derived from liver cancer patients and explore the factors affecting tumorigenicity of liver cancer in the PDX model.Methods:The hepatocellular carcinoma tissues were inoculated subcutaneously in the axilla of NPG mice using the tissue block method to establish a PDX model. The demographic characteristics and related clinical examination data of 60 hepatocellular carcinoma patients were collected using the electronic medical record system and comprehensive medical information system of Beijing You'an Hospital, affiliated to Capital Medical University. The hepatocellular carcinoma samples of 24 cases were sequenced using the Oak Wing TM-808 gene detection reagent and high-throughput sequencing technology. SPSS 17.0 statistical software was used for statistical analysis, and the count data were analyzed using the χ2 test. Results:The tumorigenicity rate of PDX samples from 60 patients with liver cancer was 35% (21/60). The average tumorigenic duration in the PDX-P0 generation was 110.71±50.45 days. There were statistically significant differences ( P<0.05) corresponding to Edmondson grade ( χ2=5.910, P=0.015) and Ki67 expression ( χ2=4.615, P=0.032) among PDX with tumorigenicity and without tumorigenicity between the liver cancer samples. There was no statistically significant difference in gene mutation (TOP25) among PDX with tumorigenicity and without tumorigenicity between liver cancer samples. Conclusion:The factors affecting the tumorigenicity of liver cancer in PDX models are complex. The high pathological grade and strong Ki67 expression may be the key factors for the completion of liver cancer in PDX models.
6.miR-200a inhibits formation of primary cilia and decreases X-ray-induced apoptosis resistance in rat cardiac fibroblasts
Li MA ; Xiaoni MA ; Songbo FU ; Chengxu MA
Chinese Journal of Pathophysiology 2025;41(10):1920-1925
AIM:To investigate the effects of microRNA-200a(miR-200a)on the formation of primary cilia and the apoptosis in X-ray-injured cardiac fibroblasts.METHODS:Hearts were isolated from neonatal Wistar rats and di-gested with trypsin.Cardiac fibroblasts were isolated,irradiated with 1 Gy of X-ray,and subsequently transfected with miR-200a-3p mimic or si-IFT88.Primary cilia were detected by immunofluorescence staining,and tranfoming growth fac-tor-β1(TGF-β1)in the culture medium was detected by ELISA.The viability of cardiac fibroblasts was detected by CCK-8.The mRNA expression of tumor necrosis factor-α(TNF-α)and caspase-3 was detected by RT-qPCR,and the protein expression of TNF-α,caspase-3,collagen type I α1 chain(Col1α1)and TGF-β1 was detected by Western blot.RE-SULTS:Compared with control group,X-ray irradiation significantly decreased the expression of miR-200a-3p and the level of apoptosis,but increased the proportion of cells with primary cilia,the length of primary cilia and the viability of cardiac fibroblasts.Compared with X-ray group,the percentage of apoptotic cardiac fibroblasts in si-IFT88 group was in-creased.Compared with X-ray group,the proportion of cells with primary cilia and the TGF-β1 content in cardiac fibro-blasts were reduced,and the proportion of apoptotic cells increased in miR-200a-3p overexpression group.CONCLU-SION:X-ray-induced down-regulation of miR-200a-3p in neonatal rat cardiac fibroblasts drives the formation of primary cilia and suppresses the apoptosis.
7.Comprehensive reconstruction of gradeⅠ-Ⅱdigital defects with hallux osteo-onychocutaneous flap of great toe: a report of 9 cases
Gangyi LIU ; Jie ZHANG ; Weichao YANG ; Chunxu WANG ; Jianmei LI ; Chunlong XI ; Xiaoni LI ; Yalan YAN ; Zhimin ZHANG
Chinese Journal of Microsurgery 2025;48(4):388-393
Objective:To observe the clinical effect of comprehensive reconstruction of grades Ⅰ-Ⅱ thumb and finger defects with hallux osteo-onychocutaneous flaps of great toe.Methods:This is a retrospective study. From June 2020 to December 2023, comprehensive reconstruction surgery for Grade Ⅰ-Ⅱ digital defect were performed with hallux osteo-onychocutaneous flaps of great toe for 3 thumbs and 7 fingers in 9 patients in the Department of Hand and Microsurgery of Baoji Third Hospital. Causes of digital injury were: 4 of machine crush, 3 of electric saw cut, 1 of door crush, and 1 of electrical burn. There were 6 grade I digital defects (beyond the nail root) and 4 grade Ⅱ defects (last segment of digit). The defects of the digits were reconstructed by taking references of the shape and structure of the contralateral normal thumbs and fingers. Then the hallux osteo-onychocutaneous flaps of great toe were designed and harvested accordingly from the left and right great toes. Donor sites were covered by skin grafting or local dressing change. One patient was treated in emergency surgery, 6 in sub-emergency surgery and 2 in elective surgery. Integrated perioperative patient management was provided to all of the patients. Postoperative follow-ups were conducted through the visit of outpatient clinic, telephone calls or WeChat interviews. Flap survival, appearance and sensation recovery were evaluated according to the Evaluation Standard of Upper Limb Functional of Hand Surgery of Chinese Medical Association.Results:Vascular insufficiency of 1 digit occurred in surgery, and relieved by local treatment with lidocaine and warm saline. All 10 digits successfully survived, and all donor sites healed spontaneously. The postoperative follow-up period was 10 to 30 months, with an average of 18 months. One transferred nail was found in poor appearance (not flat), the rest of the reconstructed digits were good in appearance and function. The nail, finger print and fine sensation (TPD 5~8 mm), as well as digital flexion, extension, grasping and opposition of the reconstructed digits were all good. According to the Evaluation Standard of Upper Limb Functional of Hand Surgery of Chinese Medical Association, at the last follow-up visit, 5 digits were in excellent, 4 in good and 1 in fair.Conclusion:The comprehensive reconstruction of grades Ⅰ-Ⅱ digital defects with hallux osteo-onychocutaneous flap of great toe is an ideal surgical technique that can reconstruct the nail, finger print and sensation of a digit, with good postoperative function as well as an aesthetic and realistic appearance.
8.Factors affecting tumorigenicity in liver cancer xenografts
Mengyin CHAI ; Shuangshuang DOU ; Buxin KOU ; Yunfei HUO ; Minghui GAO ; Quanwei LI ; Xiaoni LIU
Chinese Journal of Hepatology 2025;33(3):248-254
Objective:To establish a tumor tissue xenograft (PDX) model derived from liver cancer patients and explore the factors affecting tumorigenicity of liver cancer in the PDX model.Methods:The hepatocellular carcinoma tissues were inoculated subcutaneously in the axilla of NPG mice using the tissue block method to establish a PDX model. The demographic characteristics and related clinical examination data of 60 hepatocellular carcinoma patients were collected using the electronic medical record system and comprehensive medical information system of Beijing You'an Hospital, affiliated to Capital Medical University. The hepatocellular carcinoma samples of 24 cases were sequenced using the Oak Wing TM-808 gene detection reagent and high-throughput sequencing technology. SPSS 17.0 statistical software was used for statistical analysis, and the count data were analyzed using the χ2 test. Results:The tumorigenicity rate of PDX samples from 60 patients with liver cancer was 35% (21/60). The average tumorigenic duration in the PDX-P0 generation was 110.71±50.45 days. There were statistically significant differences ( P<0.05) corresponding to Edmondson grade ( χ2=5.910, P=0.015) and Ki67 expression ( χ2=4.615, P=0.032) among PDX with tumorigenicity and without tumorigenicity between the liver cancer samples. There was no statistically significant difference in gene mutation (TOP25) among PDX with tumorigenicity and without tumorigenicity between liver cancer samples. Conclusion:The factors affecting the tumorigenicity of liver cancer in PDX models are complex. The high pathological grade and strong Ki67 expression may be the key factors for the completion of liver cancer in PDX models.
9.Construction of Eukaryotic Expression Vector of TP53BP2 Gene and Its Expression,Purification and Activity Identification in Human Embryonic Kidney Expi293F Cells
Quanwei LI ; Minghui GAO ; Puxin KOU ; Mengyin CHAI ; Ying SHI ; Xiaoni LIU
Journal of Modern Laboratory Medicine 2024;39(6):11-17
Objective To construct a recombinant eukaryotic expression vector of human tumor suppressor p53-binding protein 2(TP53BP2)and transfect human embryonic kidney Expi293F cells.High-purity recombinant human full-length TP53BP2 protein was obtained and its biological activity was identified.Methods The TP53BP2 gene sequence was queried on the UniProt website,and the Expi293F expression system was optimized.The TP53BP2 gene was connected to pcDNA3.1(+)-P2A-eGFP vector by homologous recombination,and identified by double enzyme digestion and sequencing.Transect pcDNA3.1(+)-P2A-eGFP-TP53BP2 plasmid into Expi293F cells of Polyethylenimine(PEI),observe the transfection efficiency with a fluorescence microscope,collected cells from the experiment group and control group.The expression level of TP53BP2 recombinant protein was detected by Western blot(WB).Protein was purified by His label purification kit and Superdex 20010/300 GL chromatographic column.Sodium dodecyl sulfate-polyacrylamide gel electrophoresis.The purified recombinant protein was identified by SDS-PAGE.Combining recombinant human full-length TP53BP2 protein with p65 protein was investigated for Co-immunoprecipitation(Co-IP)precipitation.Recombinant human full-length TP53BP2 protein was co-localized with p65 protein by Immunofluorescence(IF).The surface plasmon resonance(SPR)technique was used to detect the interaction between purified recombinant human full-length TP53BP2 protein and TP53BP2 antibody.Results The recombinant plasmid pcDNA3.1(+)-P2A-eGFP-TP53BP2 was successfully constructed by sequencing and double digestion.The fluorescence microscopy results showed that the transfection efficiency was about 60%.WB showed that the TP53BP2 protein was overexpressed in Expi293F cells,which proved that transfection was successful.SDS-PAGE results showed that the purity of the purified recombinant protein was above 90%,which proved that the purification was successful.Co-IP results showed that the TP53BP2 could interact with p65 protein.The results of IF showed that His tag protein,TP53BP2 protein,and p65 protein were co-located,indicating the interaction between the three proteins.SPR results showed that the purified TP53BP2 recombinant protein had good binding activity with the TP53BP2 antibody.These results all prove that the recombinant human full-length TP53BP2 protein has biological activity.Conclusion The eukaryotic expression vector of TP53BP2 gene was successfully constructed and the recombinant full-length human TP53BP2 protein with biological activity was successfully expressed in human embryonic kidney Expi293F cells.It lays a foundation for further study on the structure and function of TP53BP2.
10.Recent advance in morphology and function of central medial thalamic nucleus
Xiao REN ; Xiaoni YE ; Mingming ZHANG ; Qian ZHANG ; Yunqing LI
Chinese Journal of Neuromedicine 2024;23(5):494-499
Central medial thalamic nucleus (CM) is a nucleus located in the medullary plate of the midline thalamus. It belongs to the midline nucleus group of the thalamus and serves as a non-specific projection system. CM has extensive anatomical connections with other brain areas and acts as a relay and integration center for brain functions. Recent research has demonstrated that CM is involved in various behaviors such as general anesthesia and arousal, pain, itch, emotions, and cognition. This paper reviews the anatomical structure, morphology, fiber connection, electrophysiological characteristics, and other related functions of CM to provide references for future research.

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