2.Decisions on what diagnostic tests to request
John Michael D. Deblois ; Nenacia Ranali Nirena P. Mendoza
The Filipino Family Physician 2022;60(1):26-33
In Evidence-based Family Practice, requesting a diagnostic test should be based on two issues. First is whether the test is accurate and thus will significantly help in clinical decision making. Second is whether the test is appropriate and acceptable for the patient. This involves careful discussion of risks and benefits based on the physician’s knowledge and experience and the patient’s values and preferences.
Diagnostic Tests, Routine
3.Exploration of an Efficient Simultaneous Molecular Detection Method of HIV, HCV, and Syphilis from a Single Dried Blood Spot.
Jie Qiong MA ; Qing Qing XU ; Lin HE ; Xiao Xia HE ; Kai CHEN ; Yue Hua WANG ; Wen Ge XING ; Yan JIANG
Biomedical and Environmental Sciences 2021;34(4):257-264
Objective:
The aim of the present study was to evaluate the performance of the simultaneous detection of HIV-1 RNA, HIV-1 DNA, and HCV RNA using one dried blood spot (DBS) as an alternative sample to plasma.
Method:
A total of 571 paired DBS/plasma samples were collected from men who have sex with men (MSM) and injection drug users (IDUs), and serological and molecular assays were performed. Using plasma results as the reference standard, the performance of DBS tests for HIV-1 RNA, HIV-1 DNA, and HCV RNA was evaluated. Pearson's correlation coefficients and Bland-Altman analysis were performed to assess the correlation and concordance between DBS and plasma.
Results:
Among paired plasma/DBS samples with detectable HIV-1 RNA and HCV RNA, five samples (5/32) were not detectable in DBS, while measurable HIV-1 RNA levels were present in plasma (1.44 to 3.99 log
Conclusion
The performance of the simultaneous detection of HIV-1 RNA, HIV-1 DNA, and HCV RNA using one DBS was acceptable. DBS, as an alternative sample to plasma, may be a viable option for the simultaneous detection of HIV-1 RNA, HIV-1 DNA, and HCV RNA in resource-limited settings or for individuals living in areas that are difficult to access.
DNA, Viral/analysis*
;
Diagnostic Tests, Routine/methods*
;
Dried Blood Spot Testing/methods*
;
HIV Infections/diagnosis*
;
HIV-1/isolation & purification*
;
Hepacivirus/isolation & purification*
;
Hepatitis C/diagnosis*
;
RNA, Viral/analysis*
;
Sensitivity and Specificity
;
Specimen Handling/methods*
;
Syphilis/diagnosis*
;
Treponema pallidum/isolation & purification*
4.Accuracy of Xpert® MTB/RIF for the detection of tuberculosis and rifampicin-resistance tuberculosis in China: A systematic review and meta-analysis.
Jing Nan FENG ; Le GAO ; Yi Xin SUN ; Ji Chun YANG ; Si Wei DENG ; Feng SUN ; Si Yan ZHAN
Journal of Peking University(Health Sciences) 2020;53(2):320-326
OBJECTIVE:
To systematically review the diagnostic accuracy of Xpert® Mycobacterium tuberculosis/rifampicin (Xpert® MTB/RIF) for the detection of active tuberculosis (TB) and rifampicin-resistance TB in Chinese patients.
METHODS:
Four Chinese databases (SinoMed, CNKI, WanFang database, and VIP) and three English databases (PubMed, Embase, and The Cochrane Library) were searched from January 1, 2000 to September 15, 2017, to identify diagnostic tests about the accuracy of Xpert® MTB/RIF in Chinese patients. Two investigators screened the articles and extracted the information independently, and then the quality of each included study was evaluated by Quality Assessment of Diagnostic Accuracy Studies (QUADAS)-2. Bivariate random-effects meta-analysis was conducted to pool the sensitivity and specificity. In addition, subgroup analyses were performed based on patient type (TB patient and TB suspected patient), sample type (sputum, bronchoalveolar lavage fluid and others). All statistical analyses were conducted with Stata version 13.0.
RESULTS:
A total of 47 articles were included in this systematic review. Most of them (38 articles) were in Chinese and only 9 articles were in English. All the articles were published during 2014 to 2017, and the sample size ranged from 31 to 3 151. Forty articles including 42 comparisons about TB were finally included with the pooled sensitivity of 0.94 (95%CI: 0.92, 0.95) and the pooled specificity of 0.87 (95%CI: 0.84, 0.91). Subgroup analysis showed that different patient and specimen types had no significant differences on sensitivity, but the specificity of sputum group was higher than that of bronchoalveolar lavage fluid. As for the detection of rifampicin-resistant TB, 33 articles (38 comparisons) were analyzed, the pooled sensitivity and specificity were 0.92 (95%CI: 0.89, 0.94) and 0.98 (95%CI: 0.97, 0.99) respectively. There were no significant differences between the patient and specimen in the subgroup analyses. The Deeks funnel plot showed a possible publication bias for detecting active tuberculosis (P=0.08) and no publication bias for rifampicin-resistant TB (P=0.24). The likelihood ratio scatter gram showed that in clinical applications, Xpert® MTB/RIF had a good diagnostic ability for detecting active tuberculosis, and it had good clinical diagnostic value in detecting rifampicin-resistant TB.
CONCLUSION
Xpert® MTB/RIF has good sensitivity and specificity in detecting TB and rifampicin-resistant TB in Chinese people. In particular, it has good clinical value in diagnosing rifampicin-resistance TB.
Antibiotics, Antitubercular/therapeutic use*
;
China
;
Diagnostic Tests, Routine
;
Drug Resistance, Bacterial
;
Humans
;
Rifampin/pharmacology*
;
Sensitivity and Specificity
;
Tuberculosis/drug therapy*
;
Tuberculosis, Multidrug-Resistant/drug therapy*
;
Tuberculosis, Pulmonary/drug therapy*
5.Assessment of the Sensitivity and Specificity of the Established Real-time Quaking-induced Conversion (RT-QuIC) Technique in Chinese CJD Surveillance.
Kang XIAO ; Xue Hua YANG ; Wen Quan ZOU ; Xiao Ping DONG ; Qi SHI
Biomedical and Environmental Sciences 2020;33(8):620-622
Real-time quaking-induced conversion (RT-QuIC) assay is a newly established PrP -detecting method. The development of RT-QuIC improves the diagnosis of sporadic Creutzfeldt-Jakob disease (sCJD), showing good sensitivity and specificity in many countries when the method was used in cerebrospinal fluid (CSF) samples. However, in China, the sensitivity and specificity of RT-QuIC has yet to be determined due to the lack of definitive diagnosis samples. Recently, 30 definitive sCJD and 30 non-CJD diagnoses were evaluated by RT-QuIC assay. In the 30 sCJD CSF samples, 29 showed positive results. By contrast, all the non-CJD samples were negative. The sensitivity and specificity of our RT-QuIC assay were 96.67% and 100%, respectively, and are comparable to other published data. Results can provide a fundamental basis for the usage of RT-QuIC assay in CJD surveillance in China.
China
;
Creutzfeldt-Jakob Syndrome
;
diagnosis
;
Diagnostic Tests, Routine
;
methods
;
Humans
;
PrPSc Proteins
;
cerebrospinal fluid
;
Sensitivity and Specificity
6.Application of paper-based microfluidics in point-of-care testing.
Jiasu XU ; Ya ZHANG ; Xiaosong SU ; Shiyin ZHANG ; Shengxiang GE
Chinese Journal of Biotechnology 2020;36(7):1283-1292
Point-of-care testing (POCT) is a test method performed on the sampling site or patient bedside. Accurate results can be achieved rapidly by the application of portable analytical instruments and compatible reagents. It has been widely used in the field of in vitro diagnosis (IVD). Paper-based microfluidics technology has great potential in developing POCT due to its advantages in low cost, simple operation, rapid detection, portable equipment, and unrestricted application conditions. In recent years, the development of paper-based microfluidic technology and its integration with various new technologies and methods have promoted the substantial development of POCT technology and methods. The classification and characteristic of the paper are summarized in this review. Paper-based microfluidic sample pretreatment methods, the flow control in the process of reaction and the signal detecting and analyzing methods for the testing results are introduced. The research progress of various kinds of microfluidic paper-based analytical devices (μPADs) toward POCT in recent years is reviewed. Finally, remaining problems and the future prospects in POCT application of paper-based microfluidics are discussed.
Diagnostic Tests, Routine
;
methods
;
Humans
;
Microfluidic Analytical Techniques
;
instrumentation
;
Paper
;
Point-of-Care Testing
7.Evaluation of Analytical Performance of an Automated Glycated Hemoglobin Analyzer, HLC-723 G11
Yoo Na CHUNG ; Seung Gyu YUN ; Yunjung CHO
Laboratory Medicine Online 2020;10(1):46-51
routine diagnostic testing systems, Tosoh G8 (Tosoh Corporation) and Capillarys 2 Flex Piercing (Sebia, France).METHODS: Tosoh G11 was evaluated for precision, linearity, and carry-over, according to the Clinical and Laboratory Standard Institute's guidelines. Test results from clinical samples were compared between Tosoh G11 and the routine testing systems, Tosoh G8 and Capillarys 2 Flex Piercing.RESULTS: With respect to the precision of Tosoh G11, the test results for low- and high-concentration controls showed a coefficient of variation of less than 1.1%. Furthermore, the new device exhibited good linearity for HbA(1c) values ranging from 3.4% to 18.8%, and carry-over was not observed. HbA(1c) results for Tosoh G11 (N=143) correlated well with those for Tosoh G8 (r=0.9971) and Capillarys 2 Flex Piercing (r=0.9918).CONCLUSIONS: Tosoh G11 demonstrated reliable analytical performance with good precision and linearity, and no carry-over results. In addition, its results were comparable to those of the existing instruments. Thus, the results of this evaluation suggest that Tosoh G11 is suitable for the routine diagnostic testing of HbA(1c) levels in clinical chemistry laboratories.]]>
Chemistry, Clinical
;
Diagnostic Tests, Routine
;
Hemoglobin A, Glycosylated
;
Humans
8.Drug hypersensitivity reactions in Asia: regional issues and challenges
Bernard Yu Hor THONG ; Michaela LUCAS ; Hye Ryun KANG ; Yoon Seok CHANG ; Philip Hei LI ; Min Moon TANG ; James YUN ; Jie Shen FOK ; Byung Keun KIM ; Mizuho NAGAO ; Iris RENGGANIS ; Yi Giien TSAI ; Wen Hung CHUNG ; Masao YAMAGUCHI ; Ticha RERKPATTANAPIPAT ; Wasu KAMCHAISATIAN ; Ting Fan LEUNG ; Ho Joo YOON ; Luo ZHANG ; Amir Hamzah Abdul LATIFF ; Takao FUJISAWA ; Francis THIEN ; Mariana C CASTELLS ; Pascal DEMOLY ; Jiu Yao WANG ; Ruby PAWANKAR
Asia Pacific Allergy 2020;10(1):8-
There are geographical, regional, and ethnic differences in the phenotypes and endotypes of patients with drug hypersensitivity reactions (DHRs) in different parts of the world. In Asia, aspects of drug hypersensitivity of regional importance include IgE-mediated allergies and T-cell-mediated reactions, including severe cutaneous adverse reactions (SCARs), to beta-lactam antibiotics, antituberculous drugs, nonsteroidal anti-inflammatory drugs (NSAIDs) and radiocontrast agents. Delabeling of low-risk penicillin allergy using direct oral provocation tests without skin tests have been found to be useful where the drug plausibility of the index reaction is low. Genetic risk associations of relevance to Asia include human leucocyte antigen (HLA)-B*1502 with carbamazepine SCAR, and HLA-B*5801 with allopurinol SCAR in some Asian ethnic groups. There remains a lack of safe and accurate diagnostic tests for antituberculous drug allergy, other than relatively high-risk desensitization regimes to first-line antituberculous therapy. NSAID hypersensitivity is common among both adults and children in Asia, with regional differences in phenotype especially among adults. Low dose aspirin desensitization is an important therapeutic modality in individuals with cross-reactive NSAID hypersensitivity and coronary artery disease following percutaneous coronary intervention. Skin testing allows patients with radiocontrast media hypersensitivity to confirm the suspected agent and test for alternatives, especially when contrasted scans are needed for future monitoring of disease relapse or progression, especially cancers.
Adult
;
Allopurinol
;
Anaphylaxis
;
Anti-Bacterial Agents
;
Asia
;
Asian Continental Ancestry Group
;
Aspirin
;
Asthma
;
Carbamazepine
;
Child
;
Cicatrix
;
Contrast Media
;
Coronary Artery Disease
;
Diagnostic Tests, Routine
;
Drug Hypersensitivity
;
Ethnic Groups
;
Humans
;
Hypersensitivity
;
Penicillins
;
Percutaneous Coronary Intervention
;
Phenotype
;
Recurrence
;
Skin Tests
9.Banana anaphylaxis in Thailand: case series
Ratchataporn THONGKHOM ; Supa ONCHAM ; Mongkhon SOMPORNRATTANAPHAN ; Wannada LAISUAN
Asia Pacific Allergy 2020;10(1):4-
BACKGROUND: Banana fruit has been recognized as an important food allergen source. Nowadays banana hypersensitivity had been reported more frequently with various presentations from oral allergy syndrome to anaphylaxis.OBJECTIVE: This study aims to describe the pattern of banana hypersensitivity and the sensitivity of diagnostic test.METHODS: Six patients who experienced banana hypersensitivity were recruited from adult allergy clinic, Ramathibodi Hospital, Mahidol University between 2015–2018. Demographic data, pattern of banana allergy consisted of the onset of reaction, symptoms, severity, cross-reactivity to kiwi, avocado, latex including type and amount of banana were collected. Skin test, serum specific IgE to banana and open-label food challenge test had been applied.RESULTS: All patients experienced multiple episodes of banana anaphylaxis. Regarding the diagnostic investigation, prick-to-prick skin test had higher sensitivity (sensitivity, 100%; 95% confidence interval [CI], 54.07%–100%) than the commercial banana extract (sensitivity, 83.33%; 95% CI, 35.88%–99.58%) and serum specific IgE to banana (sensitivity, 50%; 95% CI, 11.81%–88.19%). The discordance between skin prick test using commercial banana extract and skin test was reported. The cross-reactivity between the species of banana, kiwi, the avocado was documented in all patients. Latex skin prick test and application test were applied with negative results. From the oral food challenge test, a case of banana anaphylaxis patient can tolerate heated banana.CONCLUSION: The various phenotypes of banana hypersensitivity were identified. The prick-to-prick test showed the highest sensitivity for diagnosis of banana allergy. However, component resolved diagnostics might be needed for conclusive diagnosis.
Adult
;
Anaphylaxis
;
Diagnosis
;
Diagnostic Tests, Routine
;
Food Hypersensitivity
;
Fruit
;
Hot Temperature
;
Humans
;
Hypersensitivity
;
Hypersensitivity, Immediate
;
Immunoglobulin E
;
Latex
;
Musa
;
Persea
;
Phenotype
;
Skin
;
Skin Tests
;
Thailand
10.Genitourinary involvement in colorectal cancer: pre-operative diagnostic utility of CEA, computed tomography and cystoscopy in predicting surgical involvement.
Sylvia Karina L. Alip ; Marie Carmela M. Lapitan
Philippine Journal of Urology 2020;30(1):7-13
OBJECTIVE:
This study aims to describe the demographics, clinical characteristics of patients, and the sensitivity and specifity of the clinical, laboratory, radiologic, diagnostic parameters in detecting histopathologically-proven urinary tract involvement in primary colorectal cancer patients referred to the urology service in the Philippine General Hospital.
METHODS:
This was a retrospective, cross-sectional study. The study included patients referred to the Division of Urology from the Division of Colon, Rectal and Anal Surgery January 1, 2018 to December 31, 2018. All patients diagnosed with colorectal malignancy and referred to the Urology service were included in the study, including their cystoscopy, axial tomography, CEA and symptom assessment scores.
RESULTS:
Fifty-eight patients were included in the study and, 43% were rectal cancers and 33% were sigmoid cancers. Sensitivities and specificities were as follows. Symptoms 40%, 84%, Cystoscopy, 45%, 100%; Axial tomography 75%, 79%. Surgical involvement correlated with histopathologic involvement with a specificity of 52%. CEA did not discriminate between cohorts of positive or negative involvement.
CONCLUSION
Cystoscopy, axial tomography and symptom assessment had high positive predictive values. All diagnostics had low negative predictive values when taken in isolation. Surgical assessment correlated with histopathologic findings in half of the population. CEA did not discriminate between those with surgical involvement and those without. A multi-modality assessment strengthens detection of surgical involvement preoperatively.
Cystoscopy
;
Colorectal Neoplasms
;
Colonic Neoplasms
;
Diagnostic Tests, Routine


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